RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 CA4P22748 312 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 PPP1R13BQ96KQ4 1090 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 RIMBP2O15034 1052 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 CATSPER3Q86XQ3 398 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 SUN5Q8TC36 379 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 GCNT4Q9P109 453 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 TRPM1Q7Z4N2 1603 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 M0R3G1 203 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 ASAP2O43150 1006 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 CTNND1O60716 968 aaKnown RBP10.32□□□□□ -0.76
COL12A1-201ENST00000322507 ESRRAP11474 423 aaPredicted RBP10.32□□□□□ -0.76
COL12A1-201ENST00000322507 ANXA13P27216 316 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 GNL1P36915 607 aaPredicted RBP10.32□□□□□ -0.76
COL12A1-201ENST00000322507 HNRNPH2P55795 449 aaKnown RBP10.32□□□□□ -0.76
COL12A1-201ENST00000322507 SNRNP27Q8WVK2 155 aaKnown RBP10.32□□□□□ -0.76
COL12A1-201ENST00000322507 PRPF18Q99633 342 aaKnown RBP10.32□□□□□ -0.76
COL12A1-201ENST00000322507 PCDHA7Q9UN72 937 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 A0A1W2PRG6 482 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 ACADSP16219 412 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 TECP42680 631 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 MTTPP55157 894 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 SGO2Q562F6 1265 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 TTC16Q8NEE8 873 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 NUDCD1Q96RS6 583 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 SMCO3A2RU48 225 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 SUPT3HO75486 399 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 TAC1P20366 129 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 MAPK4P31152 587 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 CCT3P49368 545 aaKnown RBP10.32□□□□□ -0.76
COL12A1-201ENST00000322507 KYAT1Q16773 422 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 ANKRD42Q8N9B4 389 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 P2RX5Q93086 422 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 MAGOHBQ96A72 148 aaKnown RBP10.32□□□□□ -0.76
COL12A1-201ENST00000322507 YWHAGP61981 247 aaKnown RBP eCLIP10.31□□□□□ -0.76
COL12A1-201ENST00000322507 ZNF579Q8NAF0 562 aaKnown RBP10.31□□□□□ -0.76
COL12A1-201ENST00000322507 PKD2L1Q9P0L9 805 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 ASS1P00966 412 aaKnown RBP10.31□□□□□ -0.76
COL12A1-201ENST00000322507 KRT17Q04695 432 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 PPP1R2P1Q96PQ5 205 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 LSG1Q9H089 658 aaKnown RBP10.31□□□□□ -0.76
COL12A1-201ENST00000322507 BTBD7Q9P203 1132 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 SEL1LQ9UBV2 794 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 SERTAD1Q9UHV2 236 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 VIL1P09327 827 aaKnown RBP10.31□□□□□ -0.76
COL12A1-201ENST00000322507 BTN3A2P78410 334 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 STK32CQ86UX6 486 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 MAGEB5Q9BZ81 275 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 CAMSAP1Q5T5Y3 1602 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 HSPA1AP0DMV8 641 aaKnown RBP10.31□□□□□ -0.76
COL12A1-201ENST00000322507 HSPA1BP0DMV9 641 aaKnown RBP10.31□□□□□ -0.76
COL12A1-201ENST00000322507 CLUP10909 449 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 C1orf146Q5VVC0 180 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 ZNF555Q8NEP9 628 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 SYTL5Q8TDW5 730 aaPredicted RBP10.31□□□□□ -0.76
COL12A1-201ENST00000322507 MAP4K1Q92918 833 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 S100PBPQ96BU1 408 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 POTEFA5A3E0 1075 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 PPP1R18Q6NYC8 613 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 RAPH1Q70E73 1250 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 GCOM2Q9BZD3 368 aaPredicted RBP10.31□□□□□ -0.76
COL12A1-201ENST00000322507 TBC1D7Q9P0N9 293 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 CPSF3Q9UKF6 684 aaKnown RBP10.31□□□□□ -0.76
COL12A1-201ENST00000322507 RNF17Q9BXT8 1623 aaKnown RBP10.31□□□□□ -0.76
COL12A1-201ENST00000322507 TESPA1A2RU30 521 aaPredicted RBP10.31□□□□□ -0.76
COL12A1-201ENST00000322507 LDHAP00338 332 aaKnown RBP10.31□□□□□ -0.76
COL12A1-201ENST00000322507 CYP26B1Q9NR63 512 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 PAPOLBQ9NRJ5 636 aaKnown RBP10.31□□□□□ -0.76
COL12A1-201ENST00000322507 SLC13A4Q9UKG4 626 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 NR1D1P20393 614 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 CDC27P30260 824 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 CRLF3Q8IUI8 442 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 RBM41Q96IZ5 413 aaKnown RBP10.31□□□□□ -0.76
COL12A1-201ENST00000322507 FANCLQ9NW38 375 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 DNAJC12Q9UKB3 198 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 ADAM30Q9UKF2 790 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 PDE8BO95263 885 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 GGPS1O95749 300 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 KRT16P08779 473 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 TCAIMQ8N3R3 496 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 CARD14Q9BXL6 1004 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 STON1Q9Y6Q2 735 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 RASSF7Q02833 373 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 DPY19L2Q6NUT2 758 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 V9GYQ6 96 aa10.31□□□□□ -0.76
COL12A1-201ENST00000322507 SCG3Q8WXD2 468 aaKnown RBP10.3□□□□□ -0.76
COL12A1-201ENST00000322507 KRT38O76015 456 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 EIF4A1P60842 406 aaKnown RBP10.3□□□□□ -0.76
COL12A1-201ENST00000322507 BSPRYQ5W0U4 402 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 FAM81AQ8TBF8 368 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 ING3Q9NXR8 418 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 CEP170Q5SW79 1584 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 CFAP69A5D8W1 941 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 TJAP1Q5JTD0 557 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 SUCLG2Q96I99 432 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 TMEM63CQ9P1W3 806 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 TRMT6Q9UJA5 497 aaKnown RBP10.3□□□□□ -0.76
COL12A1-201ENST00000322507 GINS2Q9Y248 185 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 POLR2FP61218 127 aaKnown RBP10.3□□□□□ -0.76
COL12A1-201ENST00000322507 STKLD1Q8NE28 680 aa10.3□□□□□ -0.76
COL12A1-201ENST00000322507 MICAL3Q7RTP6 2002 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms