RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 TRAIPQ9BWF2 469 aa16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 NFKBIZQ9BYH8 718 aa16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 TMEM117Q9H0C3 514 aa16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 LMCD1Q9NZU5 365 aa16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 CLIC4Q9Y696 253 aa16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 PRRC2BQ5JSZ5 2229 aaKnown RBP16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 C5orf67F2Z3F1 127 aa16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 LONP1P36776 959 aaKnown RBP16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 MBTD1Q05BQ5 628 aa16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 PPP2R5AQ15172 486 aa16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 HYIQ5T013 277 aa16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 FAM173BQ6P4H8 233 aa16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 CABP7Q86V35 215 aa16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 ZBTB8OSQ8IWT0 167 aa16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 RASSF8Q8NHQ8 419 aa16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 KIFAP3Q92845 792 aa16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 IFT74Q96LB3 600 aa16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 PLVAPQ9BX97 442 aa16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 AAASQ9NRG9 546 aa16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 FAM105AQ9NUU6 356 aa16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 EYSQ5T1H1 3165 aa16.23■□□□□ 0.19
TUBA3D-201ENST00000321253 SLC26A4O43511 780 aa16.23■□□□□ 0.19
TUBA3D-201ENST00000321253 TSPAN1O60635 241 aa16.23■□□□□ 0.19
TUBA3D-201ENST00000321253 SSBP05455 408 aaKnown RBP eCLIP16.23■□□□□ 0.19
TUBA3D-201ENST00000321253 LINC00271P0C7V0 271 aa16.23■□□□□ 0.19
TUBA3D-201ENST00000321253 AXLP30530 894 aa16.23■□□□□ 0.19
TUBA3D-201ENST00000321253 CEBPZQ03701 1054 aaKnown RBP16.23■□□□□ 0.19
TUBA3D-201ENST00000321253 SKIV2LQ15477 1246 aaKnown RBP16.23■□□□□ 0.19
TUBA3D-201ENST00000321253 NOTUMQ6P988 496 aa16.23■□□□□ 0.19
TUBA3D-201ENST00000321253 ZNF598Q86UK7 904 aaKnown RBP16.23■□□□□ 0.19
TUBA3D-201ENST00000321253 SPRYD3Q8NCJ5 442 aa16.23■□□□□ 0.19
TUBA3D-201ENST00000321253 CALML4Q96GE6 196 aa16.23■□□□□ 0.19
TUBA3D-201ENST00000321253 PLIN2Q99541 437 aa16.23■□□□□ 0.19
TUBA3D-201ENST00000321253 C2orf40Q9H1Z8 148 aa16.23■□□□□ 0.19
TUBA3D-201ENST00000321253 FNDC1Q4ZHG4 1894 aaPredicted RBP16.23■□□□□ 0.19
TUBA3D-201ENST00000321253 ATF7P17544 494 aaPredicted RBP16.22■□□□□ 0.19
TUBA3D-201ENST00000321253 HOXA11P31270 313 aaPredicted RBP16.22■□□□□ 0.19
TUBA3D-201ENST00000321253 NAMPTP43490 491 aa16.22■□□□□ 0.19
TUBA3D-201ENST00000321253 NAALADL2Q58DX5 795 aa16.22■□□□□ 0.19
TUBA3D-201ENST00000321253 KCNK18Q7Z418 384 aa16.22■□□□□ 0.19
TUBA3D-201ENST00000321253 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.22■□□□□ 0.19
TUBA3D-201ENST00000321253 LRRC43Q8N309 656 aa16.22■□□□□ 0.19
TUBA3D-201ENST00000321253 DEPTORQ8TB45 409 aa16.22■□□□□ 0.19
TUBA3D-201ENST00000321253 PGBD4Q96DM1 585 aa16.22■□□□□ 0.19
TUBA3D-201ENST00000321253 MRPL38Q96DV4 380 aaKnown RBP16.22■□□□□ 0.19
TUBA3D-201ENST00000321253 CCDC51Q96ER9 411 aa16.22■□□□□ 0.19
TUBA3D-201ENST00000321253 PNMA5Q96PV4 448 aa16.22■□□□□ 0.19
TUBA3D-201ENST00000321253 PCDHB2Q9Y5E7 798 aa16.22■□□□□ 0.19
TUBA3D-201ENST00000321253 PCDHB12Q9Y5F1 795 aa16.22■□□□□ 0.19
TUBA3D-201ENST00000321253 ZNF623O75123 536 aa16.21■□□□□ 0.19
TUBA3D-201ENST00000321253 PTPAQ15257 358 aa16.21■□□□□ 0.19
TUBA3D-201ENST00000321253 LONRF3Q496Y0 759 aa16.21■□□□□ 0.19
TUBA3D-201ENST00000321253 CLLU1OSQ5K130 101 aa16.21■□□□□ 0.19
TUBA3D-201ENST00000321253 CDCA2Q69YH5 1023 aaPredicted RBP16.21■□□□□ 0.19
TUBA3D-201ENST00000321253 GLB1LQ6UWU2 654 aa16.21■□□□□ 0.19
TUBA3D-201ENST00000321253 HELQQ8TDG4 1101 aa16.21■□□□□ 0.19
TUBA3D-201ENST00000321253 RSPH1Q8WYR4 309 aa16.21■□□□□ 0.19
TUBA3D-201ENST00000321253 BSNDQ8WZ55 320 aa16.21■□□□□ 0.19
TUBA3D-201ENST00000321253 P2RX5Q93086 422 aa16.21■□□□□ 0.19
TUBA3D-201ENST00000321253 DRC1Q96MC2 740 aa16.21■□□□□ 0.19
TUBA3D-201ENST00000321253 CASD1Q96PB1 797 aa16.21■□□□□ 0.19
TUBA3D-201ENST00000321253 MRPL9Q9BYD2 267 aaKnown RBP16.21■□□□□ 0.19
TUBA3D-201ENST00000321253 RNF19AQ9NV58 838 aa16.21■□□□□ 0.19
TUBA3D-201ENST00000321253 TYW1Q9NV66 732 aaKnown RBP16.21■□□□□ 0.19
TUBA3D-201ENST00000321253 PRMT7Q9NVM4 692 aaPredicted RBP16.21■□□□□ 0.19
TUBA3D-201ENST00000321253 LAG3P18627 525 aa16.2■□□□□ 0.18
TUBA3D-201ENST00000321253 MARCKSP29966 332 aaPredicted RBP16.2■□□□□ 0.18
TUBA3D-201ENST00000321253 GRIN1Q05586 938 aa16.2■□□□□ 0.18
TUBA3D-201ENST00000321253 CSPP1Q1MSJ5 1256 aa16.2■□□□□ 0.18
TUBA3D-201ENST00000321253 TMEM132AQ24JP5 1023 aa16.2■□□□□ 0.18
TUBA3D-201ENST00000321253 TMEM119Q4V9L6 283 aa16.2■□□□□ 0.18
TUBA3D-201ENST00000321253 RINT1Q6NUQ1 792 aa16.2■□□□□ 0.18
TUBA3D-201ENST00000321253 CNNM3Q8NE01 707 aa16.2■□□□□ 0.18
TUBA3D-201ENST00000321253 LPPQ93052 612 aa16.2■□□□□ 0.18
TUBA3D-201ENST00000321253 CPB2Q96IY4 423 aa16.2■□□□□ 0.18
TUBA3D-201ENST00000321253 PRIMPOLQ96LW4 560 aa16.2■□□□□ 0.18
TUBA3D-201ENST00000321253 ZNF396Q96N95 335 aaPredicted RBP16.2■□□□□ 0.18
TUBA3D-201ENST00000321253 USP28Q96RU2 1077 aa16.2■□□□□ 0.18
TUBA3D-201ENST00000321253 RUSC1Q9BVN2 902 aa16.2■□□□□ 0.18
TUBA3D-201ENST00000321253 TIPINQ9BVW5 301 aa16.2■□□□□ 0.18
TUBA3D-201ENST00000321253 KIAA1671Q9BY89 1806 aa16.2■□□□□ 0.18
TUBA3D-201ENST00000321253 TRIM6Q9C030 488 aaPredicted RBP16.2■□□□□ 0.18
TUBA3D-201ENST00000321253 LMAN2LQ9H0V9 348 aa16.2■□□□□ 0.18
TUBA3D-201ENST00000321253 POLD4Q9HCU8 107 aa16.2■□□□□ 0.18
TUBA3D-201ENST00000321253 GRM6O15303 877 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 HIP1RO75146 1068 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 PLA2G4BP0C869 781 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 ARF4P18085 180 aaPredicted RBP16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 MAPK6Q16659 721 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 AMHR2Q16671 573 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 TIGD5Q53EQ6 642 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 UBXN11Q5T124 520 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 FOXD4L5Q5VV16 416 aaPredicted RBP16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 PPP4R3CPQ6ZMV5 832 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 C1orf186Q6ZWK4 172 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 SYT2Q8N9I0 419 aaPredicted RBP16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 KLHL23Q8NBE8 558 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 FOXD4L4Q8WXT5 416 aaPredicted RBP16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 CSRNP2Q9H175 543 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 KCND2Q9NZV8 630 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms