RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 TARBP2Q15633 366 aaKnown RBP13.84□□□□□ -0.19
PTPN6-201ENST00000318974 TEX35Q5T0J7 233 aa13.84□□□□□ -0.19
PTPN6-201ENST00000318974 LRRC55Q6ZSA7 311 aa13.84□□□□□ -0.19
PTPN6-201ENST00000318974 TRIM50Q86XT4 487 aa13.84□□□□□ -0.19
PTPN6-201ENST00000318974 SLC17A8Q8NDX2 589 aa13.84□□□□□ -0.19
PTPN6-201ENST00000318974 PPTC7Q8NI37 304 aa13.84□□□□□ -0.19
PTPN6-201ENST00000318974 STRA6Q9BX79 667 aa13.84□□□□□ -0.19
PTPN6-201ENST00000318974 DHX33Q9H6R0 707 aaKnown RBP13.84□□□□□ -0.19
PTPN6-201ENST00000318974 C17orf75Q9HAS0 396 aa13.84□□□□□ -0.19
PTPN6-201ENST00000318974 REXO2Q9Y3B8 237 aaKnown RBP13.84□□□□□ -0.19
PTPN6-201ENST00000318974 ATP8B1O43520 1251 aa13.84□□□□□ -0.19
PTPN6-201ENST00000318974 PPP1R37O75864 691 aa13.84□□□□□ -0.19
PTPN6-201ENST00000318974 ZRANB2O95218 330 aaKnown RBP eCLIP13.84□□□□□ -0.19
PTPN6-201ENST00000318974 ZSCAN20P17040 1043 aaPredicted RBP13.84□□□□□ -0.19
PTPN6-201ENST00000318974 MARK3P27448 753 aa13.84□□□□□ -0.19
PTPN6-201ENST00000318974 CYP2C19P33261 490 aa13.84□□□□□ -0.19
PTPN6-201ENST00000318974 RFC5P40937 340 aa13.84□□□□□ -0.19
PTPN6-201ENST00000318974 CHMP4BP1P59074 171 aa13.84□□□□□ -0.19
PTPN6-201ENST00000318974 TNFAIP2Q03169 654 aa13.84□□□□□ -0.19
PTPN6-201ENST00000318974 EMC2Q15006 297 aa13.84□□□□□ -0.19
PTPN6-201ENST00000318974 MAN2A1Q16706 1144 aa13.84□□□□□ -0.19
PTPN6-201ENST00000318974 VWA3BQ502W6 1294 aa13.84□□□□□ -0.19
PTPN6-201ENST00000318974 PRAMEF19Q5SWL8 479 aa13.84□□□□□ -0.19
PTPN6-201ENST00000318974 OR6J1Q8NGC5 347 aa13.84□□□□□ -0.19
PTPN6-201ENST00000318974 ATP8B4Q8TF62 1192 aa13.84□□□□□ -0.19
PTPN6-201ENST00000318974 AFG1LQ8WV93 481 aa13.84□□□□□ -0.19
PTPN6-201ENST00000318974 CEP63Q96MT8 703 aa13.84□□□□□ -0.19
PTPN6-201ENST00000318974 CEP89Q96ST8 783 aa13.84□□□□□ -0.19
PTPN6-201ENST00000318974 ST6GALNAC4Q9H4F1 302 aa13.84□□□□□ -0.19
PTPN6-201ENST00000318974 AGPAT5Q9NUQ2 364 aa13.84□□□□□ -0.19
PTPN6-201ENST00000318974 SMTNP53814 917 aa13.83□□□□□ -0.2
PTPN6-201ENST00000318974 NCKAP1LP55160 1127 aa13.83□□□□□ -0.2
PTPN6-201ENST00000318974 RTP1P59025 263 aa13.83□□□□□ -0.2
PTPN6-201ENST00000318974 KCNA1Q09470 495 aa13.83□□□□□ -0.2
PTPN6-201ENST00000318974 DMP1Q13316 513 aaPredicted RBP13.83□□□□□ -0.2
PTPN6-201ENST00000318974 PLCB4Q15147 1175 aa13.83□□□□□ -0.2
PTPN6-201ENST00000318974 ZC3H3Q8IXZ2 948 aaKnown RBP13.83□□□□□ -0.2
PTPN6-201ENST00000318974 EHBP1Q8NDI1 1231 aa13.83□□□□□ -0.2
PTPN6-201ENST00000318974 SLC7A3Q8WY07 619 aa13.83□□□□□ -0.2
PTPN6-201ENST00000318974 PCMTD1Q96MG8 357 aaPredicted RBP13.83□□□□□ -0.2
PTPN6-201ENST00000318974 NDST4Q9H3R1 872 aa13.83□□□□□ -0.2
PTPN6-201ENST00000318974 MCM3APO60318 1980 aa13.83□□□□□ -0.2
PTPN6-201ENST00000318974 CETN3O15182 167 aa13.83□□□□□ -0.2
PTPN6-201ENST00000318974 IPO7O95373 1038 aaKnown RBP13.83□□□□□ -0.2
PTPN6-201ENST00000318974 TBC1D8O95759 1140 aa13.83□□□□□ -0.2
PTPN6-201ENST00000318974 LGALS2P05162 132 aa13.83□□□□□ -0.2
PTPN6-201ENST00000318974 ZNF865P0CJ78 1059 aaPredicted RBP13.83□□□□□ -0.2
PTPN6-201ENST00000318974 SOX10P56693 466 aa13.83□□□□□ -0.2
PTPN6-201ENST00000318974 GABPB1Q06547 395 aaPredicted RBP13.83□□□□□ -0.2
PTPN6-201ENST00000318974 WHAMMP3Q1A5X7 153 aa13.83□□□□□ -0.2
PTPN6-201ENST00000318974 HAUS6Q7Z4H7 955 aa13.83□□□□□ -0.2
PTPN6-201ENST00000318974 SPIRE2Q8WWL2 714 aa13.83□□□□□ -0.2
PTPN6-201ENST00000318974 ARHGAP39Q9C0H5 1083 aa13.83□□□□□ -0.2
PTPN6-201ENST00000318974 POLR3FQ9H1D9 316 aaPredicted RBP13.83□□□□□ -0.2
PTPN6-201ENST00000318974 TMEM206Q9H813 350 aa13.83□□□□□ -0.2
PTPN6-201ENST00000318974 ERAP1Q9NZ08 941 aa13.83□□□□□ -0.2
PTPN6-201ENST00000318974 FHOD1Q9Y613 1164 aa13.83□□□□□ -0.2
PTPN6-201ENST00000318974 CCDC169A6NNP5 214 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 EIF3CLB5ME19 914 aaKnown RBP13.82□□□□□ -0.2
PTPN6-201ENST00000318974 SLC16A4O15374 487 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 TGFB1I1O43294 461 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 HBP1O60381 514 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 PPFIA4O75335 1185 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 GNA14O95837 355 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 ABL1P00519 1130 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 NR2F2P24468 414 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 HNRNPH3P31942 346 aaKnown RBP13.82□□□□□ -0.2
PTPN6-201ENST00000318974 MAP2K2P36507 400 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 NPTX2P47972 431 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 GTF2BQ00403 316 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 ADAM9Q13443 819 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 KIF22Q14807 665 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 KSR1Q8IVT5 923 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 IFT74Q96LB3 600 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 EIF3CQ99613 913 aaKnown RBP13.82□□□□□ -0.2
PTPN6-201ENST00000318974 NTPCRQ9BSD7 190 aaKnown RBP13.82□□□□□ -0.2
PTPN6-201ENST00000318974 CFHR5Q9BXR6 569 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 KMT5AQ9NQR1 393 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 KCNG1Q9UIX4 513 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 ZMYM2Q9UBW7 1377 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 KRT86O43790 486 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 MAFO75444 373 aaPredicted RBP13.82□□□□□ -0.2
PTPN6-201ENST00000318974 IGHA2P01877 340 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 PNMA6AP0CW24 399 aaPredicted RBP13.82□□□□□ -0.2
PTPN6-201ENST00000318974 XRCC5P13010 732 aaKnown RBP13.82□□□□□ -0.2
PTPN6-201ENST00000318974 RPL13P26373 211 aaKnown RBP13.82□□□□□ -0.2
PTPN6-201ENST00000318974 KLK7P49862 253 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 SP3Q02447 781 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 HS2ST1Q7LGA3 356 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 EXOC8Q8IYI6 725 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 SYCP3Q8IZU3 236 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 BSNDQ8WZ55 320 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 ACCSQ96QU6 501 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 GBP3Q9H0R5 595 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 NHEJ1Q9H9Q4 299 aaPredicted RBP13.82□□□□□ -0.2
PTPN6-201ENST00000318974 TRPC6Q9Y210 931 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 SIK3Q9Y2K2 1263 aa13.82□□□□□ -0.2
PTPN6-201ENST00000318974 ADCY6O43306 1168 aa13.81□□□□□ -0.2
PTPN6-201ENST00000318974 MMP3P08254 477 aa13.81□□□□□ -0.2
PTPN6-201ENST00000318974 NFIL3Q16649 462 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms