RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 LAMP2P13473 410 aa14.96□□□□□ -0.01
SYCN-201ENST00000318438 PMLP29590 882 aa14.96□□□□□ -0.01
SYCN-201ENST00000318438 KIF5BP33176 963 aa14.96□□□□□ -0.01
SYCN-201ENST00000318438 GPC5P78333 572 aa14.96□□□□□ -0.01
SYCN-201ENST00000318438 KRT32Q14532 448 aa14.96□□□□□ -0.01
SYCN-201ENST00000318438 LONRF3Q496Y0 759 aa14.96□□□□□ -0.01
SYCN-201ENST00000318438 GET4Q7L5D6 327 aaPredicted RBP14.96□□□□□ -0.01
SYCN-201ENST00000318438 METTL13Q8N6R0 699 aa14.96□□□□□ -0.01
SYCN-201ENST00000318438 CTCFLQ8NI51 663 aaPredicted RBP14.96□□□□□ -0.01
SYCN-201ENST00000318438 NELL1Q92832 810 aa14.96□□□□□ -0.01
SYCN-201ENST00000318438 ZNF668Q96K58 619 aaPredicted RBP14.96□□□□□ -0.01
SYCN-201ENST00000318438 RPP25Q9BUL9 199 aaKnown RBP14.96□□□□□ -0.01
SYCN-201ENST00000318438 KCNH7Q9NS40 1196 aa14.96□□□□□ -0.01
SYCN-201ENST00000318438 PATJQ8NI35 1801 aa14.95□□□□□ -0.02
SYCN-201ENST00000318438 FAM170BA6NMN3 283 aa14.95□□□□□ -0.02
SYCN-201ENST00000318438 GDF9O60383 454 aa14.95□□□□□ -0.02
SYCN-201ENST00000318438 CALM1P0DP23 149 aa14.95□□□□□ -0.02
SYCN-201ENST00000318438 CALM2P0DP24 149 aa14.95□□□□□ -0.02
SYCN-201ENST00000318438 CALM3P0DP25 149 aa14.95□□□□□ -0.02
SYCN-201ENST00000318438 CD72P21854 359 aa14.95□□□□□ -0.02
SYCN-201ENST00000318438 FGFR4P22455 802 aa14.95□□□□□ -0.02
SYCN-201ENST00000318438 SLC26A2P50443 739 aa14.95□□□□□ -0.02
SYCN-201ENST00000318438 CLCN3P51790 818 aa14.95□□□□□ -0.02
SYCN-201ENST00000318438 UBE2SQ16763 222 aa14.95□□□□□ -0.02
SYCN-201ENST00000318438 NFXL1Q6ZNB6 911 aa14.95□□□□□ -0.02
SYCN-201ENST00000318438 SGMS1Q86VZ5 419 aa14.95□□□□□ -0.02
SYCN-201ENST00000318438 RASEFQ8IZ41 740 aa14.95□□□□□ -0.02
SYCN-201ENST00000318438 SMG7Q92540 1137 aaKnown RBP14.95□□□□□ -0.02
SYCN-201ENST00000318438 SDF4Q9BRK5 362 aa14.95□□□□□ -0.02
SYCN-201ENST00000318438 MYL10Q9BUA6 226 aa14.95□□□□□ -0.02
SYCN-201ENST00000318438 DDX23Q9BUQ8 820 aaKnown RBP14.95□□□□□ -0.02
SYCN-201ENST00000318438 GBP3Q9H0R5 595 aa14.95□□□□□ -0.02
SYCN-201ENST00000318438 NRDE2Q9H7Z3 1164 aa14.95□□□□□ -0.02
SYCN-201ENST00000318438 DNAJB4Q9UDY4 337 aa14.95□□□□□ -0.02
SYCN-201ENST00000318438 COL1A2P08123 1366 aa14.95□□□□□ -0.02
SYCN-201ENST00000318438 C2CD2LO14523 706 aa14.94□□□□□ -0.02
SYCN-201ENST00000318438 BACH1O14867 736 aa14.94□□□□□ -0.02
SYCN-201ENST00000318438 MAFGO15525 162 aa14.94□□□□□ -0.02
SYCN-201ENST00000318438 B4GALT3O60512 393 aa14.94□□□□□ -0.02
SYCN-201ENST00000318438 LILRB3O75022 631 aa14.94□□□□□ -0.02
SYCN-201ENST00000318438 REC8O95072 547 aa14.94□□□□□ -0.02
SYCN-201ENST00000318438 SMARCA1P28370 1054 aa14.94□□□□□ -0.02
SYCN-201ENST00000318438 SLC11A1P49279 550 aa14.94□□□□□ -0.02
SYCN-201ENST00000318438 NLRP11P59045 1033 aaKnown RBP14.94□□□□□ -0.02
SYCN-201ENST00000318438 ITGB3BPQ13352 177 aaPredicted RBP14.94□□□□□ -0.02
SYCN-201ENST00000318438 MLF2Q15773 248 aaPredicted RBP14.94□□□□□ -0.02
SYCN-201ENST00000318438 ZNF484Q5JVG2 852 aa14.94□□□□□ -0.02
SYCN-201ENST00000318438 N4BP2L1Q5TBK1 243 aaPredicted RBP14.94□□□□□ -0.02
SYCN-201ENST00000318438 LPPQ93052 612 aa14.94□□□□□ -0.02
SYCN-201ENST00000318438 ZNF707Q96C28 371 aaPredicted RBP14.94□□□□□ -0.02
SYCN-201ENST00000318438 RRP36Q96EU6 259 aaKnown RBP14.94□□□□□ -0.02
SYCN-201ENST00000318438 LZTS2Q9BRK4 669 aa14.94□□□□□ -0.02
SYCN-201ENST00000318438 SPZ1Q9BXG8 430 aa14.94□□□□□ -0.02
SYCN-201ENST00000318438 ADAMTS10Q9H324 1103 aa14.94□□□□□ -0.02
SYCN-201ENST00000318438 TBC1D13Q9NVG8 400 aa14.94□□□□□ -0.02
SYCN-201ENST00000318438 INPP5FQ9Y2H2 1132 aa14.94□□□□□ -0.02
SYCN-201ENST00000318438 SLC12A7Q9Y666 1083 aa14.94□□□□□ -0.02
SYCN-201ENST00000318438 DOCK8Q8NF50 2099 aa14.93□□□□□ -0.02
SYCN-201ENST00000318438 IGKV6D-21A0A0A0MT36 114 aa14.93□□□□□ -0.02
SYCN-201ENST00000318438 EPB41L2O43491 1005 aaKnown RBP14.93□□□□□ -0.02
SYCN-201ENST00000318438 ATG7O95352 703 aa14.93□□□□□ -0.02
SYCN-201ENST00000318438 CCNE2O96020 404 aa14.93□□□□□ -0.02
SYCN-201ENST00000318438 PROS1P07225 676 aa14.93□□□□□ -0.02
SYCN-201ENST00000318438 HMGB1P09429 215 aaKnown RBP14.93□□□□□ -0.02
SYCN-201ENST00000318438 HSPA4P34932 840 aa14.93□□□□□ -0.02
SYCN-201ENST00000318438 GNAQP50148 359 aa14.93□□□□□ -0.02
SYCN-201ENST00000318438 ADCK5Q3MIX3 580 aa14.93□□□□□ -0.02
SYCN-201ENST00000318438 DHX32Q7L7V1 743 aaKnown RBP14.93□□□□□ -0.02
SYCN-201ENST00000318438 TRMT1LQ7Z2T5 733 aaKnown RBP14.93□□□□□ -0.02
SYCN-201ENST00000318438 CCDC60Q8IWA6 550 aaPredicted RBP14.93□□□□□ -0.02
SYCN-201ENST00000318438 FGF14Q92915 247 aa14.93□□□□□ -0.02
SYCN-201ENST00000318438 KCNB2Q92953 911 aa14.93□□□□□ -0.02
SYCN-201ENST00000318438 LRRC2Q9BYS8 371 aa14.93□□□□□ -0.02
SYCN-201ENST00000318438 LTB4R2Q9NPC1 389 aa14.93□□□□□ -0.02
SYCN-201ENST00000318438 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.93□□□□□ -0.02
SYCN-201ENST00000318438 AKT3Q9Y243 479 aa14.93□□□□□ -0.02
SYCN-201ENST00000318438 CNOT1A5YKK6 2376 aaKnown RBP14.93□□□□□ -0.02
SYCN-201ENST00000318438 MIA3Q5JRA6 1907 aa14.93□□□□□ -0.02
SYCN-201ENST00000318438 NFASCO94856 1347 aa14.92□□□□□ -0.02
SYCN-201ENST00000318438 DDX39AO00148 427 aaKnown RBP14.92□□□□□ -0.02
SYCN-201ENST00000318438 SPATA31D3P0C874 917 aa14.92□□□□□ -0.02
SYCN-201ENST00000318438 ATP4AP20648 1035 aa14.92□□□□□ -0.02
SYCN-201ENST00000318438 EIF4BP23588 611 aaKnown RBP14.92□□□□□ -0.02
SYCN-201ENST00000318438 SHC2P98077 582 aa14.92□□□□□ -0.02
SYCN-201ENST00000318438 EXOSC10Q01780 885 aaKnown RBP14.92□□□□□ -0.02
SYCN-201ENST00000318438 RNASELQ05823 741 aaKnown RBP14.92□□□□□ -0.02
SYCN-201ENST00000318438 SLC44A4Q53GD3 710 aa14.92□□□□□ -0.02
SYCN-201ENST00000318438 FAM160B1Q5W0V3 765 aa14.92□□□□□ -0.02
SYCN-201ENST00000318438 PDXDC2PQ6P474 469 aa14.92□□□□□ -0.02
SYCN-201ENST00000318438 PARM1Q6UWI2 310 aa14.92□□□□□ -0.02
SYCN-201ENST00000318438 CYP26C1Q6V0L0 522 aa14.92□□□□□ -0.02
SYCN-201ENST00000318438 SPATA31D4Q6ZUB0 917 aa14.92□□□□□ -0.02
SYCN-201ENST00000318438 RHOBTB2Q9BYZ6 727 aa14.92□□□□□ -0.02
SYCN-201ENST00000318438 PSTPIP2Q9H939 334 aa14.92□□□□□ -0.02
SYCN-201ENST00000318438 PIDD1Q9HB75 910 aa14.92□□□□□ -0.02
SYCN-201ENST00000318438 PRMT8Q9NR22 394 aaPredicted RBP14.92□□□□□ -0.02
SYCN-201ENST00000318438 MRPL17Q9NRX2 175 aaKnown RBP14.92□□□□□ -0.02
SYCN-201ENST00000318438 SEMA4GQ9NTN9 838 aa14.92□□□□□ -0.02
SYCN-201ENST00000318438 RAB23Q9ULC3 237 aa14.92□□□□□ -0.02
SYCN-201ENST00000318438 PCDHA6Q9UN73 950 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms