RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 SCN9AQ15858 1988 aa17.34■□□□□ 0.37
CRAT-201ENST00000318080 SNAP25P60880 206 aa17.34■□□□□ 0.37
CRAT-201ENST00000318080 ZNF543Q08ER8 600 aa17.34■□□□□ 0.37
CRAT-201ENST00000318080 SHROOM1Q2M3G4 852 aaPredicted RBP17.34■□□□□ 0.37
CRAT-201ENST00000318080 ZNF317Q96PQ6 595 aaPredicted RBP17.34■□□□□ 0.37
CRAT-201ENST00000318080 PCDHB13Q9Y5F0 798 aa17.34■□□□□ 0.37
CRAT-201ENST00000318080 SNHG28P0DPA3 235 aa17.33■□□□□ 0.36
CRAT-201ENST00000318080 XRCC5P13010 732 aaKnown RBP17.33■□□□□ 0.36
CRAT-201ENST00000318080 GRIK3Q13003 919 aa17.33■□□□□ 0.36
CRAT-201ENST00000318080 EDRF1Q3B7T1 1238 aa17.33■□□□□ 0.36
CRAT-201ENST00000318080 SLC17A8Q8NDX2 589 aa17.33■□□□□ 0.36
CRAT-201ENST00000318080 HES6Q96HZ4 224 aa17.33■□□□□ 0.36
CRAT-201ENST00000318080 FAM129AQ9BZQ8 928 aa17.33■□□□□ 0.36
CRAT-201ENST00000318080 NT5C3AQ9H0P0 336 aa17.33■□□□□ 0.36
CRAT-201ENST00000318080 GCNT4Q9P109 453 aa17.33■□□□□ 0.36
CRAT-201ENST00000318080 BCS1LQ9Y276 419 aa17.33■□□□□ 0.36
CRAT-201ENST00000318080 G3V3G9 751 aa17.33■□□□□ 0.36
CRAT-201ENST00000318080 FLOT1O75955 427 aa17.33■□□□□ 0.36
CRAT-201ENST00000318080 CALRP27797 417 aaKnown RBP17.33■□□□□ 0.36
CRAT-201ENST00000318080 SCNN1DP51172 638 aa17.33■□□□□ 0.36
CRAT-201ENST00000318080 KNOP1Q1ED39 458 aaKnown RBP17.33■□□□□ 0.36
CRAT-201ENST00000318080 DCAF8Q5TAQ9 597 aa17.33■□□□□ 0.36
CRAT-201ENST00000318080 AGBL2Q5U5Z8 902 aa17.33■□□□□ 0.36
CRAT-201ENST00000318080 OTUD6AQ7L8S5 288 aa17.33■□□□□ 0.36
CRAT-201ENST00000318080 PALB2Q86YC2 1186 aa17.33■□□□□ 0.36
CRAT-201ENST00000318080 EIF1ADQ8N9N8 165 aaKnown RBP17.33■□□□□ 0.36
CRAT-201ENST00000318080 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.33■□□□□ 0.36
CRAT-201ENST00000318080 SLC35C1Q96A29 364 aa17.33■□□□□ 0.36
CRAT-201ENST00000318080 ADAM7Q9H2U9 754 aa17.33■□□□□ 0.36
CRAT-201ENST00000318080 TAS2R14Q9NYV8 317 aa17.33■□□□□ 0.36
CRAT-201ENST00000318080 SUCLA2Q9P2R7 463 aaPredicted RBP17.33■□□□□ 0.36
CRAT-201ENST00000318080 IGF2BP3O00425 579 aaKnown RBP eCLIP17.32■□□□□ 0.36
CRAT-201ENST00000318080 JAM2P57087 298 aa17.32■□□□□ 0.36
CRAT-201ENST00000318080 CYP4A11Q02928 519 aa17.32■□□□□ 0.36
CRAT-201ENST00000318080 LLGL1Q15334 1064 aa17.32■□□□□ 0.36
CRAT-201ENST00000318080 ASPRV1Q53RT3 343 aa17.32■□□□□ 0.36
CRAT-201ENST00000318080 SLC35G2Q8TBE7 412 aa17.32■□□□□ 0.36
CRAT-201ENST00000318080 MAGEC3Q8TD91 643 aa17.32■□□□□ 0.36
CRAT-201ENST00000318080 EBF2Q9HAK2 575 aa17.32■□□□□ 0.36
CRAT-201ENST00000318080 DDX4Q9NQI0 724 aaKnown RBP17.32■□□□□ 0.36
CRAT-201ENST00000318080 CHORDC1Q9UHD1 332 aaPredicted RBP17.32■□□□□ 0.36
CRAT-201ENST00000318080 DBR1Q9UK59 544 aaKnown RBP17.32■□□□□ 0.36
CRAT-201ENST00000318080 SRRM3A6NNA2 597 aaPredicted RBP17.32■□□□□ 0.36
CRAT-201ENST00000318080 KIF3CO14782 793 aa17.32■□□□□ 0.36
CRAT-201ENST00000318080 PRKCIP41743 596 aa17.32■□□□□ 0.36
CRAT-201ENST00000318080 NT5C2P49902 561 aa17.32■□□□□ 0.36
CRAT-201ENST00000318080 C10orf76Q5T2E6 689 aa17.32■□□□□ 0.36
CRAT-201ENST00000318080 TRIM68Q6AZZ1 485 aa17.32■□□□□ 0.36
CRAT-201ENST00000318080 FRMD5Q7Z6J6 570 aa17.32■□□□□ 0.36
CRAT-201ENST00000318080 TAX1BP1Q86VP1 789 aa17.32■□□□□ 0.36
CRAT-201ENST00000318080 SPDYE1Q8NFV5 336 aaPredicted RBP17.32■□□□□ 0.36
CRAT-201ENST00000318080 SEC14L1Q92503 715 aa17.32■□□□□ 0.36
CRAT-201ENST00000318080 ARHGEF26Q96DR7 871 aa17.32■□□□□ 0.36
CRAT-201ENST00000318080 COA1Q9GZY4 146 aa17.32■□□□□ 0.36
CRAT-201ENST00000318080 ASTN1O14525 1302 aa17.31■□□□□ 0.36
CRAT-201ENST00000318080 SPDYE3A6NKU9 549 aa17.31■□□□□ 0.36
CRAT-201ENST00000318080 MAP3K13O43283 966 aa17.31■□□□□ 0.36
CRAT-201ENST00000318080 ECE2O60344 883 aa17.31■□□□□ 0.36
CRAT-201ENST00000318080 EVI5O60447 810 aa17.31■□□□□ 0.36
CRAT-201ENST00000318080 KRT16P08779 473 aa17.31■□□□□ 0.36
CRAT-201ENST00000318080 CREB1P16220 341 aa17.31■□□□□ 0.36
CRAT-201ENST00000318080 RBM5P52756 815 aaKnown RBP eCLIP17.31■□□□□ 0.36
CRAT-201ENST00000318080 RNASELQ05823 741 aaKnown RBP17.31■□□□□ 0.36
CRAT-201ENST00000318080 EPS8L3Q8TE67 593 aaKnown RBP17.31■□□□□ 0.36
CRAT-201ENST00000318080 TMOD4Q9NZQ9 345 aa17.31■□□□□ 0.36
CRAT-201ENST00000318080 SLC12A4Q9UP95 1085 aa17.31■□□□□ 0.36
CRAT-201ENST00000318080 SNX24Q9Y343 169 aa17.31■□□□□ 0.36
CRAT-201ENST00000318080 UTP11Q9Y3A2 253 aaKnown RBP17.31■□□□□ 0.36
CRAT-201ENST00000318080 COL4A5P29400 1685 aa17.31■□□□□ 0.36
CRAT-201ENST00000318080 YDJCA8MPS7 323 aa17.31■□□□□ 0.36
CRAT-201ENST00000318080 CCDC188H7C350 402 aa17.31■□□□□ 0.36
CRAT-201ENST00000318080 hCG_1984214I3L0E3 225 aa17.31■□□□□ 0.36
CRAT-201ENST00000318080 DDX3YO15523 660 aaKnown RBP17.31■□□□□ 0.36
CRAT-201ENST00000318080 NR3C1P04150 777 aa17.31■□□□□ 0.36
CRAT-201ENST00000318080 SPATA31C1P0DKV0 1188 aa17.31■□□□□ 0.36
CRAT-201ENST00000318080 PLTPP55058 493 aa17.31■□□□□ 0.36
CRAT-201ENST00000318080 ADCY1Q08828 1119 aa17.31■□□□□ 0.36
CRAT-201ENST00000318080 ZNF713Q8N859 430 aaPredicted RBP17.31■□□□□ 0.36
CRAT-201ENST00000318080 ATXN2LQ8WWM7 1075 aaKnown RBP17.31■□□□□ 0.36
CRAT-201ENST00000318080 RNF25Q96BH1 459 aaPredicted RBP17.31■□□□□ 0.36
CRAT-201ENST00000318080 TLCD1Q96CP7 247 aa17.31■□□□□ 0.36
CRAT-201ENST00000318080 L3MBTL3Q96JM7 780 aaPredicted RBP17.31■□□□□ 0.36
CRAT-201ENST00000318080 FMO2Q99518 471 aa17.31■□□□□ 0.36
CRAT-201ENST00000318080 TXLNGYQ9BZA5 131 aa17.31■□□□□ 0.36
CRAT-201ENST00000318080 KCNMB3Q9NPA1 279 aa17.31■□□□□ 0.36
CRAT-201ENST00000318080 TRAF3IP3Q9Y228 551 aa17.31■□□□□ 0.36
CRAT-201ENST00000318080 KDM3AQ9Y4C1 1321 aa17.3■□□□□ 0.36
CRAT-201ENST00000318080 PAEPP09466 180 aa17.3■□□□□ 0.36
CRAT-201ENST00000318080 ABL2P42684 1182 aa17.3■□□□□ 0.36
CRAT-201ENST00000318080 IFI16Q16666 785 aaKnown RBP17.3■□□□□ 0.36
CRAT-201ENST00000318080 PRR16Q569H4 304 aa17.3■□□□□ 0.36
CRAT-201ENST00000318080 CAPRIN2Q6IMN6 1127 aaKnown RBP17.3■□□□□ 0.36
CRAT-201ENST00000318080 TRPM8Q7Z2W7 1104 aa17.3■□□□□ 0.36
CRAT-201ENST00000318080 ARMC2Q8NEN0 867 aa17.3■□□□□ 0.36
CRAT-201ENST00000318080 CCDC26Q8TAB7 109 aa17.3■□□□□ 0.36
CRAT-201ENST00000318080 SLITRK6Q9H5Y7 841 aa17.3■□□□□ 0.36
CRAT-201ENST00000318080 ECT2Q9H8V3 914 aa17.3■□□□□ 0.36
CRAT-201ENST00000318080 BZW2Q9Y6E2 419 aaKnown RBP17.3■□□□□ 0.36
CRAT-201ENST00000318080 SSR1P43307 286 aaKnown RBP17.3■□□□□ 0.36
CRAT-201ENST00000318080 SPIRE1Q08AE8 756 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms