RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 TRIM60Q495X7 471 aa16.94■□□□□ 0.3
PDLIM5-202ENST00000318007 TAS1R3Q7RTX0 852 aa16.94■□□□□ 0.3
PDLIM5-202ENST00000318007 TMEM40Q8WWA1 233 aa16.94■□□□□ 0.3
PDLIM5-202ENST00000318007 MED15Q96RN5 788 aa16.94■□□□□ 0.3
PDLIM5-202ENST00000318007 RBSNQ9H1K0 784 aa16.94■□□□□ 0.3
PDLIM5-202ENST00000318007 SEMA6BQ9H3T3 888 aa16.94■□□□□ 0.3
PDLIM5-202ENST00000318007 IFT122Q9HBG6 1241 aa16.94■□□□□ 0.3
PDLIM5-202ENST00000318007 K7ERI5 159 aa16.93■□□□□ 0.3
PDLIM5-202ENST00000318007 PSMA7O14818 248 aa16.93■□□□□ 0.3
PDLIM5-202ENST00000318007 B4GALT5O43286 388 aa16.93■□□□□ 0.3
PDLIM5-202ENST00000318007 MAPTP10636 758 aaKnown RBP16.93■□□□□ 0.3
PDLIM5-202ENST00000318007 SERINC5Q86VE9 423 aa16.93■□□□□ 0.3
PDLIM5-202ENST00000318007 DHX38Q92620 1227 aaKnown RBP16.93■□□□□ 0.3
PDLIM5-202ENST00000318007 OSBPL7Q9BZF2 842 aa16.93■□□□□ 0.3
PDLIM5-202ENST00000318007 TBX20Q9UMR3 447 aa16.93■□□□□ 0.3
PDLIM5-202ENST00000318007 ZMYM2Q9UBW7 1377 aa16.93■□□□□ 0.3
PDLIM5-202ENST00000318007 HNRNPDLO14979 420 aaKnown RBP16.93■□□□□ 0.3
PDLIM5-202ENST00000318007 HARSP12081 509 aaKnown RBP16.93■□□□□ 0.3
PDLIM5-202ENST00000318007 TFDP1Q14186 410 aa16.93■□□□□ 0.3
PDLIM5-202ENST00000318007 ANKRD40Q6AI12 368 aa16.93■□□□□ 0.3
PDLIM5-202ENST00000318007 SLC39A5Q6ZMH5 540 aa16.93■□□□□ 0.3
PDLIM5-202ENST00000318007 EPM2AIP1Q7L775 607 aaPredicted RBP16.93■□□□□ 0.3
PDLIM5-202ENST00000318007 SESTD1Q86VW0 696 aa16.93■□□□□ 0.3
PDLIM5-202ENST00000318007 ZBTB8OSQ8IWT0 167 aa16.93■□□□□ 0.3
PDLIM5-202ENST00000318007 NAT10Q9H0A0 1025 aaKnown RBP16.93■□□□□ 0.3
PDLIM5-202ENST00000318007 C11orf49Q9H6J7 331 aa16.93■□□□□ 0.3
PDLIM5-202ENST00000318007 C17orf75Q9HAS0 396 aa16.93■□□□□ 0.3
PDLIM5-202ENST00000318007 ARHGAP28Q9P2N2 729 aa16.93■□□□□ 0.3
PDLIM5-202ENST00000318007 ANKFY1Q9P2R3 1169 aa16.93■□□□□ 0.3
PDLIM5-202ENST00000318007 DACH1Q9UI36 760 aa16.93■□□□□ 0.3
PDLIM5-202ENST00000318007 PCDHB13Q9Y5F0 798 aa16.93■□□□□ 0.3
PDLIM5-202ENST00000318007 CDY2AQ9Y6F7 541 aa16.93■□□□□ 0.3
PDLIM5-202ENST00000318007 BECN2A8MW95 431 aa16.92■□□□□ 0.3
PDLIM5-202ENST00000318007 GPR32O75388 356 aa16.92■□□□□ 0.3
PDLIM5-202ENST00000318007 IBSPP21815 317 aaPredicted RBP16.92■□□□□ 0.3
PDLIM5-202ENST00000318007 RTP1P59025 263 aa16.92■□□□□ 0.3
PDLIM5-202ENST00000318007 PLCB2Q00722 1185 aa16.92■□□□□ 0.3
PDLIM5-202ENST00000318007 STRN3Q13033 797 aa16.92■□□□□ 0.3
PDLIM5-202ENST00000318007 KNOP1Q1ED39 458 aaKnown RBP16.92■□□□□ 0.3
PDLIM5-202ENST00000318007 TAF2Q6P1X5 1199 aa16.92■□□□□ 0.3
PDLIM5-202ENST00000318007 DHX40Q8IX18 779 aaKnown RBP16.92■□□□□ 0.3
PDLIM5-202ENST00000318007 GUF1Q8N442 669 aaKnown RBP16.92■□□□□ 0.3
PDLIM5-202ENST00000318007 SPIRE2Q8WWL2 714 aa16.92■□□□□ 0.3
PDLIM5-202ENST00000318007 CPB2Q96IY4 423 aa16.92■□□□□ 0.3
PDLIM5-202ENST00000318007 PCIF1Q9H4Z3 704 aa16.92■□□□□ 0.3
PDLIM5-202ENST00000318007 PPP1R37O75864 691 aa16.91■□□□□ 0.3
PDLIM5-202ENST00000318007 MATR3P43243 847 aaKnown RBP eCLIP16.91■□□□□ 0.32e-6■■■■□ 23.9
PDLIM5-202ENST00000318007 PHKA2P46019 1235 aa16.91■□□□□ 0.3
PDLIM5-202ENST00000318007 GTF2BQ00403 316 aa16.91■□□□□ 0.3
PDLIM5-202ENST00000318007 TPD52L1Q16890 204 aaPredicted RBP16.91■□□□□ 0.3
PDLIM5-202ENST00000318007 FAM126BQ8IXS8 530 aa16.91■□□□□ 0.3
PDLIM5-202ENST00000318007 FAM200AQ8TCP9 573 aa16.91■□□□□ 0.3
PDLIM5-202ENST00000318007 P2RX5Q93086 422 aa16.91■□□□□ 0.3
PDLIM5-202ENST00000318007 NTPCRQ9BSD7 190 aaKnown RBP16.91■□□□□ 0.3
PDLIM5-202ENST00000318007 TARS2Q9BW92 718 aaKnown RBP16.91■□□□□ 0.3
PDLIM5-202ENST00000318007 PPP1R12CQ9BZL4 782 aa16.91■□□□□ 0.3
PDLIM5-202ENST00000318007 UMODL1Q5DID0 1318 aa16.91■□□□□ 0.3
PDLIM5-202ENST00000318007 M0QZ92 97 aa16.91■□□□□ 0.3
PDLIM5-202ENST00000318007 PRKCBP05771 671 aa16.91■□□□□ 0.3
PDLIM5-202ENST00000318007 PTENP60484 403 aa16.91■□□□□ 0.3
PDLIM5-202ENST00000318007 MBTD1Q05BQ5 628 aa16.91■□□□□ 0.3
PDLIM5-202ENST00000318007 LRRC26Q2I0M4 334 aa16.91■□□□□ 0.3
PDLIM5-202ENST00000318007 ZNF618Q5T7W0 954 aa16.91■□□□□ 0.3
PDLIM5-202ENST00000318007 STXBP4Q6ZWJ1 553 aa16.91■□□□□ 0.3
PDLIM5-202ENST00000318007 SLC43A3Q8NBI5 491 aa16.91■□□□□ 0.3
PDLIM5-202ENST00000318007 ZNF507Q8TCN5 953 aa16.91■□□□□ 0.3
PDLIM5-202ENST00000318007 ADAMTS10Q9H324 1103 aa16.91■□□□□ 0.3
PDLIM5-202ENST00000318007 KCTD10Q9H3F6 313 aa16.91■□□□□ 0.3
PDLIM5-202ENST00000318007 ANKRD63C9JTQ0 380 aa16.9■□□□□ 0.3
PDLIM5-202ENST00000318007 EIF3DO15371 548 aaKnown RBP eCLIP16.9■□□□□ 0.3
PDLIM5-202ENST00000318007 TGFB1I1O43294 461 aa16.9■□□□□ 0.3
PDLIM5-202ENST00000318007 CHRNA1P02708 482 aa16.9■□□□□ 0.3
PDLIM5-202ENST00000318007 COL6A1P12109 1028 aa16.9■□□□□ 0.3
PDLIM5-202ENST00000318007 CDK7P50613 346 aa16.9■□□□□ 0.3
PDLIM5-202ENST00000318007 CYP2J2P51589 502 aa16.9■□□□□ 0.3
PDLIM5-202ENST00000318007 MRPS6P82932 125 aaKnown RBP16.9■□□□□ 0.3
PDLIM5-202ENST00000318007 TLE2Q04725 743 aa16.9■□□□□ 0.3
PDLIM5-202ENST00000318007 MAPK6Q16659 721 aa16.9■□□□□ 0.3
PDLIM5-202ENST00000318007 RSPH3Q86UC2 560 aa16.9■□□□□ 0.3
PDLIM5-202ENST00000318007 ZSWIM2Q8NEG5 633 aa16.9■□□□□ 0.3
PDLIM5-202ENST00000318007 ZBTB45Q96K62 511 aaPredicted RBP16.9■□□□□ 0.3
PDLIM5-202ENST00000318007 ACCSQ96QU6 501 aa16.9■□□□□ 0.3
PDLIM5-202ENST00000318007 STRA6Q9BX79 667 aa16.9■□□□□ 0.3
PDLIM5-202ENST00000318007 PRDM5Q9NQX1 630 aaPredicted RBP16.9■□□□□ 0.3
PDLIM5-202ENST00000318007 SAMSN1Q9NSI8 373 aaKnown RBP16.9■□□□□ 0.3
PDLIM5-202ENST00000318007 NFE2L3Q9Y4A8 694 aa16.9■□□□□ 0.3
PDLIM5-202ENST00000318007 PHLPP2Q6ZVD8 1323 aa16.9■□□□□ 0.3
PDLIM5-202ENST00000318007 ASAP2O43150 1006 aa16.89■□□□□ 0.3
PDLIM5-202ENST00000318007 GHRP10912 638 aa16.89■□□□□ 0.3
PDLIM5-202ENST00000318007 LIG4P49917 911 aa16.89■□□□□ 0.3
PDLIM5-202ENST00000318007 PTK7Q13308 1070 aa16.89■□□□□ 0.3
PDLIM5-202ENST00000318007 SEZ6Q53EL9 994 aa16.89■□□□□ 0.3
PDLIM5-202ENST00000318007 CDCA2Q69YH5 1023 aaPredicted RBP16.89■□□□□ 0.3
PDLIM5-202ENST00000318007 NECAB2Q7Z6G3 386 aa16.89■□□□□ 0.3
PDLIM5-202ENST00000318007 ZBTB33Q86T24 672 aa16.89■□□□□ 0.3
PDLIM5-202ENST00000318007 MAP4K3Q8IVH8 894 aa16.89■□□□□ 0.3
PDLIM5-202ENST00000318007 RDH13Q8NBN7 331 aa16.89■□□□□ 0.3
PDLIM5-202ENST00000318007 CBWD1Q9BRT8 395 aa16.89■□□□□ 0.3
PDLIM5-202ENST00000318007 GBP3Q9H0R5 595 aa16.89■□□□□ 0.3
PDLIM5-202ENST00000318007 FANCLQ9NW38 375 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms