RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 TMC6Q7Z403 805 aa5.08□□□□□ -1.6
SMCO3-201ENST00000316048 IL17RAQ96F46 866 aa5.08□□□□□ -1.6
SMCO3-201ENST00000316048 TACO1Q9BSH4 297 aaKnown RBP5.08□□□□□ -1.6
SMCO3-201ENST00000316048 B3GNT5Q9BYG0 378 aa5.08□□□□□ -1.6
SMCO3-201ENST00000316048 PITHD1Q9GZP4 211 aaPredicted RBP5.08□□□□□ -1.6
SMCO3-201ENST00000316048 GALNT8Q9NY28 637 aa5.08□□□□□ -1.6
SMCO3-201ENST00000316048 PCDHB6Q9Y5E3 794 aa5.08□□□□□ -1.6
SMCO3-201ENST00000316048 RRBP1Q9P2E9 1410 aaKnown RBP5.07□□□□□ -1.6
SMCO3-201ENST00000316048 LRRC9Q6ZRR7 1453 aa5.07□□□□□ -1.6
SMCO3-201ENST00000316048 MAGI1Q96QZ7 1491 aaPredicted RBP5.07□□□□□ -1.6
SMCO3-201ENST00000316048 SAMD9Q5K651 1589 aa5.07□□□□□ -1.6
SMCO3-201ENST00000316048 UBXN7O94888 489 aa5.07□□□□□ -1.6
SMCO3-201ENST00000316048 ECE1P42892 770 aa5.07□□□□□ -1.6
SMCO3-201ENST00000316048 PPP3CAQ08209 521 aa5.07□□□□□ -1.6
SMCO3-201ENST00000316048 VASNQ6EMK4 673 aa5.07□□□□□ -1.6
SMCO3-201ENST00000316048 CCDC149Q6ZUS6 474 aa5.07□□□□□ -1.6
SMCO3-201ENST00000316048 SPICE1Q8N0Z3 855 aa5.07□□□□□ -1.6
SMCO3-201ENST00000316048 GLB1L3Q8NCI6 653 aaPredicted RBP5.07□□□□□ -1.6
SMCO3-201ENST00000316048 FAM193BQ96PV7 902 aaPredicted RBP5.07□□□□□ -1.6
SMCO3-201ENST00000316048 STRBPQ96SI9 672 aaKnown RBP5.07□□□□□ -1.6
SMCO3-201ENST00000316048 NOL10Q9BSC4 688 aaKnown RBP5.07□□□□□ -1.6
SMCO3-201ENST00000316048 NAA15Q9BXJ9 866 aaKnown RBP5.07□□□□□ -1.6
SMCO3-201ENST00000316048 WNT8AQ9H1J5 351 aa5.07□□□□□ -1.6
SMCO3-201ENST00000316048 FNIP2Q9P278 1114 aa5.07□□□□□ -1.6
SMCO3-201ENST00000316048 PHTF1Q9UMS5 762 aa5.07□□□□□ -1.6
SMCO3-201ENST00000316048 CCNB3Q8WWL7 1395 aa5.07□□□□□ -1.6
SMCO3-201ENST00000316048 SNAPC4Q5SXM2 1469 aa5.07□□□□□ -1.6
SMCO3-201ENST00000316048 KIAA0586Q9BVV6 1533 aa5.07□□□□□ -1.6
SMCO3-201ENST00000316048 EIF4G3O43432 1585 aaKnown RBP5.07□□□□□ -1.6
SMCO3-201ENST00000316048 IQGAP2Q13576 1575 aa5.07□□□□□ -1.6
SMCO3-201ENST00000316048 A0A0A6YYK5 440 aaPredicted RBP5.06□□□□□ -1.6
SMCO3-201ENST00000316048 B3GALT2O43825 422 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 TUSC2O75896 110 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 FBLN1P23142 703 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 NCKAP1LP55160 1127 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 BCAR1P56945 870 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 ANTXR2P58335 489 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 KANK2Q63ZY3 851 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 MORC1Q86VD1 984 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 DENND1CQ8IV53 801 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 ABI1Q8IZP0 508 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 MARCH10Q8NA82 808 aaPredicted RBP5.06□□□□□ -1.6
SMCO3-201ENST00000316048 VPS37AQ8NEZ2 397 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 IGDCC4Q8TDY8 1250 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 TTC17Q96AE7 1141 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 KIRREL1Q96J84 757 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 SOX7Q9BT81 388 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 OR10A5Q9H207 317 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 BHMT2Q9H2M3 363 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 PCMTD2Q9NV79 361 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 SCOCQ9UIL1 159 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 PCF11O94913 1555 aaKnown RBP5.06□□□□□ -1.6
SMCO3-201ENST00000316048 ANO9A1A5B4 782 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 EIF3JO75822 258 aaKnown RBP5.06□□□□□ -1.6
SMCO3-201ENST00000316048 WNT11O96014 354 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 ENO2P09104 434 aaPredicted RBP5.06□□□□□ -1.6
SMCO3-201ENST00000316048 SLC16A1P53985 500 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 CD83Q01151 205 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 XRRA1Q6P2D8 792 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 TSHZ1Q6ZSZ6 1077 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 CDYL2Q8N8U2 506 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 DTX3Q8N9I9 347 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 AGBL5Q8NDL9 886 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.06□□□□□ -1.6
SMCO3-201ENST00000316048 OR5AN1Q8NGI8 311 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 NT5C1BQ96P26 610 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 PTPRHQ9HD43 1115 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 HSPBP1Q9NZL4 362 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 FTSJ1Q9UET6 329 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 ZFP69BQ9UJL9 534 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 SYNPO2Q9UMS6 1093 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 POLHQ9Y253 713 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 PCDHA13Q9Y5I0 950 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 GRIN2AQ12879 1464 aa5.06□□□□□ -1.6
SMCO3-201ENST00000316048 OR14I1A6ND48 311 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 LRRC14BA6NHZ5 514 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 H3BML4 177 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 N4BP3O15049 544 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 ZBED1O96006 694 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 VIPR1P32241 457 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 ADCY8P40145 1251 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 NKX3-2P78367 333 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 NPNTQ6UXI9 565 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 STPG3Q8N7X2 389 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 FLAD1Q8NFF5 587 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 CALML6Q8TD86 181 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 RPGRQ92834 1020 aaKnown RBP5.05□□□□□ -1.6
SMCO3-201ENST00000316048 DDX11Q96FC9 970 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 CGRRF1Q99675 332 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 SYNJ2O15056 1496 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 CFAP43Q8NDM7 1665 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 UGGT2Q9NYU1 1516 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 MTUS2Q5JR59 1369 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 A0A0A6YYJ9 748 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 LOC100996750A0A140TA64 210 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 PHKG2P15735 406 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 APEX1P27695 318 aaKnown RBP5.05□□□□□ -1.6
SMCO3-201ENST00000316048 MCAMP43121 646 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 MGAT5Q09328 741 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 LONRF1Q17RB8 773 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms