RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 MAGEB2O15479 319 aa14.45□□□□□ -0.1
RFFL-201ENST00000315249 PDGFRBP09619 1106 aa14.45□□□□□ -0.1
RFFL-201ENST00000315249 TBXAS1P24557 533 aaPredicted RBP14.45□□□□□ -0.1
RFFL-201ENST00000315249 PRKCEQ02156 737 aa14.45□□□□□ -0.1
RFFL-201ENST00000315249 LAMC2Q13753 1193 aa14.45□□□□□ -0.1
RFFL-201ENST00000315249 TUFT1Q9NNX1 390 aa14.45□□□□□ -0.1
RFFL-201ENST00000315249 TJP2Q9UDY2 1190 aa14.45□□□□□ -0.1
RFFL-201ENST00000315249 EFCAB8A8MWE9 144 aa14.45□□□□□ -0.1
RFFL-201ENST00000315249 IRF1P10914 325 aa14.45□□□□□ -0.1
RFFL-201ENST00000315249 KRT17Q04695 432 aa14.45□□□□□ -0.1
RFFL-201ENST00000315249 NFIAQ12857 509 aa14.45□□□□□ -0.1
RFFL-201ENST00000315249 ARRDC4Q8NCT1 418 aa14.45□□□□□ -0.1
RFFL-201ENST00000315249 PCSK1NQ9UHG2 260 aa14.45□□□□□ -0.1
RFFL-201ENST00000315249 AGAP1Q9UPQ3 857 aa14.45□□□□□ -0.1
RFFL-201ENST00000315249 ALDH1A1P00352 501 aa14.45□□□□□ -0.1
RFFL-201ENST00000315249 HMBSP08397 361 aa14.45□□□□□ -0.1
RFFL-201ENST00000315249 RPS6P62753 249 aaKnown RBP14.45□□□□□ -0.1
RFFL-201ENST00000315249 WHAMMP3Q1A5X7 153 aa14.45□□□□□ -0.1
RFFL-201ENST00000315249 NMT1P30419 496 aaKnown RBP14.44□□□□□ -0.1
RFFL-201ENST00000315249 BACE1P56817 501 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 MGAT5BQ3V5L5 792 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 SLC35F6Q8N357 371 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 NRBP1Q9UHY1 535 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 MEGF6O75095 1541 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 SP110Q9HB58 689 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 TRIM17Q9Y577 477 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 SCINQ9Y6U3 715 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 ZC3H4Q9UPT8 1303 aaKnown RBP14.44□□□□□ -0.1
RFFL-201ENST00000315249 C17orf102A2RUQ5 167 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 SRGAP2O75044 1071 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 INPP5BP32019 993 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 CLCN1P35523 988 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 PPARGP37231 505 aaPredicted RBP14.44□□□□□ -0.1
RFFL-201ENST00000315249 PSMC1P62191 440 aaKnown RBP14.44□□□□□ -0.1
RFFL-201ENST00000315249 KRT31Q15323 416 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 KYAT1Q16773 422 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 RCAN1P53805 252 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 CNOT8Q9UFF9 292 aaKnown RBP14.44□□□□□ -0.1
RFFL-201ENST00000315249 PCDHA13Q9Y5I0 950 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 SNX9Q9Y5X1 595 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 SOWAHDA6NJG2 315 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 TROVE2P10155 538 aaKnown RBP eCLIP14.44□□□□□ -0.1
RFFL-201ENST00000315249 ALDH7A1P49419 539 aaKnown RBP14.44□□□□□ -0.1
RFFL-201ENST00000315249 HDLBPQ00341 1268 aaKnown RBP14.44□□□□□ -0.1
RFFL-201ENST00000315249 SH2D4BQ5SQS7 431 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 SH3TC2Q8TF17 1288 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 ZDHHC15Q96MV8 337 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 RUNDC3BQ96NL0 473 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 TAAR1Q96RJ0 339 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 NUDCD1Q96RS6 583 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 ASNSD1Q9NWL6 643 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 TRPA1O75762 1119 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 APOEP02649 317 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 TMEM132DQ14C87 1099 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 PDIA6Q15084 440 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 APPL2Q8NEU8 664 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 ENOX1Q8TC92 643 aaKnown RBP14.44□□□□□ -0.1
RFFL-201ENST00000315249 EXT2Q93063 718 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 ASIC4Q96FT7 647 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 HACD3Q9P035 362 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 FAM8A1Q9UBU6 413 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 TLK1Q9UKI8 766 aa14.44□□□□□ -0.1
RFFL-201ENST00000315249 MST1RQ04912 1400 aa14.43□□□□□ -0.1
RFFL-201ENST00000315249 GCLCP48506 637 aaPredicted RBP14.43□□□□□ -0.1
RFFL-201ENST00000315249 ACRBPQ8NEB7 543 aa14.43□□□□□ -0.1
RFFL-201ENST00000315249 YME1L1Q96TA2 773 aa14.43□□□□□ -0.1
RFFL-201ENST00000315249 TNIP3Q96KP6 325 aa14.43□□□□□ -0.1
RFFL-201ENST00000315249 SPATA17Q96L03 361 aa14.43□□□□□ -0.1
RFFL-201ENST00000315249 ZNF512Q96ME7 567 aaPredicted RBP14.43□□□□□ -0.1
RFFL-201ENST00000315249 SLC7A5P2Q9GIP4 190 aa14.43□□□□□ -0.1
RFFL-201ENST00000315249 STAP1Q9ULZ2 295 aa14.43□□□□□ -0.1
RFFL-201ENST00000315249 NLRP11P59045 1033 aaKnown RBP14.43□□□□□ -0.1
RFFL-201ENST00000315249 DEPDC1BQ8WUY9 529 aa14.43□□□□□ -0.1
RFFL-201ENST00000315249 DAAM1Q9Y4D1 1078 aa14.43□□□□□ -0.1
RFFL-201ENST00000315249 EMSYQ7Z589 1322 aa14.43□□□□□ -0.1
RFFL-201ENST00000315249 PDHXO00330 501 aa14.43□□□□□ -0.1
RFFL-201ENST00000315249 DGAT1O75907 488 aa14.43□□□□□ -0.1
RFFL-201ENST00000315249 CYBBP04839 570 aa14.43□□□□□ -0.1
RFFL-201ENST00000315249 ZNF467Q7Z7K2 595 aaPredicted RBP14.43□□□□□ -0.1
RFFL-201ENST00000315249 TSR3Q9UJK0 312 aaKnown RBP14.43□□□□□ -0.1
RFFL-201ENST00000315249 NCOA3Q9Y6Q9 1424 aa14.43□□□□□ -0.1
RFFL-201ENST00000315249 RFX7Q2KHR2 1363 aa14.43□□□□□ -0.1
RFFL-201ENST00000315249 IKBKBO14920 756 aa14.43□□□□□ -0.1
RFFL-201ENST00000315249 EYA4O95677 639 aa14.43□□□□□ -0.1
RFFL-201ENST00000315249 TRIM49P0CI25 452 aa14.43□□□□□ -0.1
RFFL-201ENST00000315249 TRIM49CP0CI26 452 aa14.43□□□□□ -0.1
RFFL-201ENST00000315249 TCF7P36402 384 aaPredicted RBP14.43□□□□□ -0.1
RFFL-201ENST00000315249 WDR72Q3MJ13 1102 aa14.43□□□□□ -0.1
RFFL-201ENST00000315249 ALKBH5Q6P6C2 394 aaKnown RBP14.43□□□□□ -0.1
RFFL-201ENST00000315249 DEFB128Q7Z7B8 93 aa14.43□□□□□ -0.1
RFFL-201ENST00000315249 C11orf70Q9BRQ4 267 aa14.43□□□□□ -0.1
RFFL-201ENST00000315249 PPME1Q9Y570 386 aa14.43□□□□□ -0.1
RFFL-201ENST00000315249 ECEL1O95672 775 aa14.43□□□□□ -0.1
RFFL-201ENST00000315249 MAP7Q14244 749 aa14.43□□□□□ -0.1
RFFL-201ENST00000315249 MMEL1Q495T6 779 aa14.43□□□□□ -0.1
RFFL-201ENST00000315249 FAM102AQ5T9C2 384 aaPredicted RBP14.43□□□□□ -0.1
RFFL-201ENST00000315249 ZNF746Q6NUN9 644 aaPredicted RBP14.43□□□□□ -0.1
RFFL-201ENST00000315249 ZNF609O15014 1411 aa14.42□□□□□ -0.1
RFFL-201ENST00000315249 JADE1Q6IE81 842 aa14.42□□□□□ -0.1
RFFL-201ENST00000315249 SGMS1Q86VZ5 419 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms