RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 ASAP2O43150 1006 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 PRR29P0C7W0 189 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 AP3B2Q13367 1082 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 CNGA3Q16281 694 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 NAALADL2Q58DX5 795 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 IZUMO3Q5VZ72 239 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 CLEC17AQ6ZS10 378 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 AGGF1Q8N302 714 aaeCLIP14.55□□□□□ -0.08
CLCN6-201ENST00000312413 LRRC1Q9BTT6 524 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 PFASO15067 1338 aa14.54□□□□□ -0.08
CLCN6-201ENST00000312413 KDM5AP29375 1690 aaKnown RBP14.54□□□□□ -0.08
CLCN6-201ENST00000312413 TRIM66O15016 1216 aa14.54□□□□□ -0.08
CLCN6-201ENST00000312413 FTLP02792 175 aaPredicted RBP14.54□□□□□ -0.08
CLCN6-201ENST00000312413 PASD1Q8IV76 773 aa14.54□□□□□ -0.08
CLCN6-201ENST00000312413 RAD54LQ92698 747 aa14.54□□□□□ -0.08
CLCN6-201ENST00000312413 DHX36Q9H2U1 1008 aaKnown RBP14.54□□□□□ -0.08
CLCN6-201ENST00000312413 AMACRQ9UHK6 382 aa14.54□□□□□ -0.08
CLCN6-201ENST00000312413 H0Y626 953 aa14.54□□□□□ -0.08
CLCN6-201ENST00000312413 TRIM16O95361 564 aa14.54□□□□□ -0.08
CLCN6-201ENST00000312413 KCNJ6P48051 423 aa14.54□□□□□ -0.08
CLCN6-201ENST00000312413 POU5F1BQ06416 359 aa14.54□□□□□ -0.08
CLCN6-201ENST00000312413 CATSPER3Q86XQ3 398 aa14.54□□□□□ -0.08
CLCN6-201ENST00000312413 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.54□□□□□ -0.08
CLCN6-201ENST00000312413 RFFLQ8WZ73 363 aa14.54□□□□□ -0.08
CLCN6-201ENST00000312413 FSD1LQ9BXM9 530 aa14.54□□□□□ -0.08
CLCN6-201ENST00000312413 POTEMA6NI47 508 aa14.54□□□□□ -0.08
CLCN6-201ENST00000312413 ENO4A6NNW6 628 aa14.54□□□□□ -0.08
CLCN6-201ENST00000312413 COASYQ13057 564 aa14.54□□□□□ -0.08
CLCN6-201ENST00000312413 DRAP1Q14919 205 aaPredicted RBP14.54□□□□□ -0.08
CLCN6-201ENST00000312413 IMPG1Q17R60 797 aa14.54□□□□□ -0.08
CLCN6-201ENST00000312413 RHOT1Q8IXI2 618 aa14.54□□□□□ -0.08
CLCN6-201ENST00000312413 OR6B3Q8NGW1 331 aa14.54□□□□□ -0.08
CLCN6-201ENST00000312413 PRMT1Q99873 361 aaKnown RBP14.54□□□□□ -0.08
CLCN6-201ENST00000312413 PIH1D3Q9NQM4 214 aaKnown RBP14.54□□□□□ -0.08
CLCN6-201ENST00000312413 SNX12Q9UMY4 172 aa14.54□□□□□ -0.08
CLCN6-201ENST00000312413 AATKQ6ZMQ8 1374 aa14.54□□□□□ -0.08
CLCN6-201ENST00000312413 KRT7P08729 469 aa14.54□□□□□ -0.08
CLCN6-201ENST00000312413 LRRC8EQ6NSJ5 796 aa14.54□□□□□ -0.08
CLCN6-201ENST00000312413 TMEM270Q6UE05 265 aa14.54□□□□□ -0.08
CLCN6-201ENST00000312413 ZNF710Q8N1W2 664 aa14.54□□□□□ -0.08
CLCN6-201ENST00000312413 PIGOQ8TEQ8 1089 aa14.54□□□□□ -0.08
CLCN6-201ENST00000312413 SEMA3FQ13275 785 aa14.53□□□□□ -0.08
CLCN6-201ENST00000312413 STRBPQ96SI9 672 aaKnown RBP14.53□□□□□ -0.08
CLCN6-201ENST00000312413 IP6K2Q9UHH9 426 aa14.53□□□□□ -0.08
CLCN6-201ENST00000312413 SUPT3HO75486 399 aa14.53□□□□□ -0.08
CLCN6-201ENST00000312413 TYK2P29597 1187 aa14.53□□□□□ -0.08
CLCN6-201ENST00000312413 ATP6V1E1P36543 226 aa14.53□□□□□ -0.08
CLCN6-201ENST00000312413 IL6STP40189 918 aaPredicted RBP14.53□□□□□ -0.08
CLCN6-201ENST00000312413 PFKFB3Q16875 520 aaPredicted RBP14.53□□□□□ -0.08
CLCN6-201ENST00000312413 KNOP1Q1ED39 458 aaKnown RBP14.53□□□□□ -0.08
CLCN6-201ENST00000312413 ULK4Q96C45 1275 aa14.53□□□□□ -0.08
CLCN6-201ENST00000312413 MAGEB5Q9BZ81 275 aa14.53□□□□□ -0.08
CLCN6-201ENST00000312413 SEC31BQ9NQW1 1179 aa14.53□□□□□ -0.08
CLCN6-201ENST00000312413 HOXA13P31271 388 aaPredicted RBP14.53□□□□□ -0.08
CLCN6-201ENST00000312413 TEX9Q8N6V9 391 aa14.53□□□□□ -0.08
CLCN6-201ENST00000312413 DTX3LQ8TDB6 740 aa14.53□□□□□ -0.08
CLCN6-201ENST00000312413 BRIP1Q9BX63 1249 aa14.53□□□□□ -0.08
CLCN6-201ENST00000312413 USP15Q9Y4E8 981 aaPredicted RBP14.53□□□□□ -0.08
CLCN6-201ENST00000312413 SRGAP2CP0DJJ0 459 aa14.53□□□□□ -0.08
CLCN6-201ENST00000312413 MAP3K10Q02779 954 aa14.53□□□□□ -0.08
CLCN6-201ENST00000312413 CC2D2BQ6DHV5 1058 aa14.53□□□□□ -0.08
CLCN6-201ENST00000312413 LRIG3Q6UXM1 1119 aa14.53□□□□□ -0.08
CLCN6-201ENST00000312413 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.53□□□□□ -0.083e-9■■□□□ 12.1
CLCN6-201ENST00000312413 BFARQ9NZS9 450 aa14.53□□□□□ -0.08
CLCN6-201ENST00000312413 GGT7Q9UJ14 662 aa14.53□□□□□ -0.08
CLCN6-201ENST00000312413 DNMT1P26358 1616 aaKnown RBP14.53□□□□□ -0.08
CLCN6-201ENST00000312413 FGFR4P22455 802 aa14.52□□□□□ -0.08
CLCN6-201ENST00000312413 KCNA1Q09470 495 aa14.52□□□□□ -0.08
CLCN6-201ENST00000312413 GUF1Q8N442 669 aaKnown RBP14.52□□□□□ -0.08
CLCN6-201ENST00000312413 SH2D3CQ8N5H7 860 aa14.52□□□□□ -0.08
CLCN6-201ENST00000312413 TRABDQ9H4I3 376 aa14.52□□□□□ -0.08
CLCN6-201ENST00000312413 PKD2L2Q9NZM6 624 aa14.52□□□□□ -0.08
CLCN6-201ENST00000312413 SMG5Q9UPR3 1016 aaKnown RBP14.52□□□□□ -0.08
CLCN6-201ENST00000312413 UBE4BO95155 1302 aa14.52□□□□□ -0.08
CLCN6-201ENST00000312413 MYBL1P10243 752 aa14.52□□□□□ -0.08
CLCN6-201ENST00000312413 CCNA1P78396 465 aa14.52□□□□□ -0.08
CLCN6-201ENST00000312413 KDSRQ06136 332 aa14.52□□□□□ -0.08
CLCN6-201ENST00000312413 MTF1Q14872 753 aa14.52□□□□□ -0.08
CLCN6-201ENST00000312413 CCDC85BQ15834 202 aaPredicted RBP14.52□□□□□ -0.08
CLCN6-201ENST00000312413 DNAL1Q4LDG9 190 aa14.52□□□□□ -0.08
CLCN6-201ENST00000312413 RNPC3Q96LT9 517 aaKnown RBP14.52□□□□□ -0.08
CLCN6-201ENST00000312413 ASCC2Q9H1I8 757 aaPredicted RBP14.52□□□□□ -0.08
CLCN6-201ENST00000312413 MLH3Q9UHC1 1453 aa14.52□□□□□ -0.08
CLCN6-201ENST00000312413 DISP1Q96F81 1524 aa14.52□□□□□ -0.08
CLCN6-201ENST00000312413 PIK3R2O00459 728 aa14.52□□□□□ -0.08
CLCN6-201ENST00000312413 KCNA3P22001 575 aa14.52□□□□□ -0.08
CLCN6-201ENST00000312413 CCND1P24385 295 aa14.52□□□□□ -0.08
CLCN6-201ENST00000312413 ANXA13P27216 316 aa14.52□□□□□ -0.08
CLCN6-201ENST00000312413 MAP4P27816 1152 aaKnown RBP14.52□□□□□ -0.08
CLCN6-201ENST00000312413 HADHAP40939 763 aa14.52□□□□□ -0.08
CLCN6-201ENST00000312413 USPL1Q5W0Q7 1092 aa14.52□□□□□ -0.08
CLCN6-201ENST00000312413 HEATR6Q6AI08 1181 aaKnown RBP14.52□□□□□ -0.08
CLCN6-201ENST00000312413 LRRC8BQ6P9F7 803 aa14.52□□□□□ -0.08
CLCN6-201ENST00000312413 DPP9Q86TI2 863 aa14.52□□□□□ -0.08
CLCN6-201ENST00000312413 HACD3Q9P035 362 aa14.52□□□□□ -0.08
CLCN6-201ENST00000312413 LIMA1Q9UHB6 759 aaKnown RBP14.52□□□□□ -0.08
CLCN6-201ENST00000312413 FOXP2O15409 715 aa14.52□□□□□ -0.09
CLCN6-201ENST00000312413 FAM160B2Q86V87 743 aa14.52□□□□□ -0.09
CLCN6-201ENST00000312413 C1orf54Q8WWF1 131 aa14.52□□□□□ -0.09
CLCN6-201ENST00000312413 ARL8AQ96BM9 186 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms