RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 PPP1R37O75864 691 aa27.44■■□□□ 1.98
HOXB3-201ENST00000311626 DGKZQ13574 1117 aa27.44■■□□□ 1.98
HOXB3-201ENST00000311626 CCDC26Q8TAB7 109 aa27.44■■□□□ 1.98
HOXB3-201ENST00000311626 MKNK1Q9BUB5 465 aa27.44■■□□□ 1.98
HOXB3-201ENST00000311626 EPN3Q9H201 632 aa27.44■■□□□ 1.98
HOXB3-201ENST00000311626 E7EVH7 732 aa27.44■■□□□ 1.98
HOXB3-201ENST00000311626 FKBP1AP62942 108 aaKnown RBP27.44■■□□□ 1.98
HOXB3-201ENST00000311626 ODF2Q5BJF6 829 aa27.44■■□□□ 1.98
HOXB3-201ENST00000311626 KRT35Q92764 455 aa27.44■■□□□ 1.98
HOXB3-201ENST00000311626 LRRC45Q96CN5 670 aa27.44■■□□□ 1.98
HOXB3-201ENST00000311626 RANBP17Q9H2T7 1088 aaKnown RBP27.44■■□□□ 1.98
HOXB3-201ENST00000311626 NOVA2Q9UNW9 492 aaKnown RBP27.44■■□□□ 1.98
HOXB3-201ENST00000311626 NCANO14594 1321 aa27.44■■□□□ 1.98
HOXB3-201ENST00000311626 A0A087WUV0 522 aaPredicted RBP27.43■■□□□ 1.98
HOXB3-201ENST00000311626 ANXA13P27216 316 aa27.43■■□□□ 1.98
HOXB3-201ENST00000311626 NPEPPSP55786 919 aa27.43■■□□□ 1.98
HOXB3-201ENST00000311626 AGPAT1Q99943 283 aa27.43■■□□□ 1.98
HOXB3-201ENST00000311626 GPRC5CQ9NQ84 441 aa27.43■■□□□ 1.98
HOXB3-201ENST00000311626 HOMER2Q9NSB8 354 aa27.43■■□□□ 1.98
HOXB3-201ENST00000311626 CNOT8Q9UFF9 292 aaKnown RBP27.43■■□□□ 1.98
HOXB3-201ENST00000311626 BHMG1C9JSJ3 638 aaPredicted RBP27.43■■□□□ 1.98
HOXB3-201ENST00000311626 C21orf2O43822 256 aa27.43■■□□□ 1.98
HOXB3-201ENST00000311626 FTLP02792 175 aaPredicted RBP27.43■■□□□ 1.98
HOXB3-201ENST00000311626 MKRN4PQ13434 485 aaPredicted RBP27.43■■□□□ 1.98
HOXB3-201ENST00000311626 TMC3Q7Z5M5 1100 aa27.43■■□□□ 1.98
HOXB3-201ENST00000311626 PLEKHO2Q8TD55 490 aa27.43■■□□□ 1.98
HOXB3-201ENST00000311626 ZNF473Q8WTR7 871 aaKnown RBP27.43■■□□□ 1.98
HOXB3-201ENST00000311626 UTP11Q9Y3A2 253 aaKnown RBP27.43■■□□□ 1.98
HOXB3-201ENST00000311626 MRPL11Q9Y3B7 192 aaKnown RBP27.43■■□□□ 1.98
HOXB3-201ENST00000311626 POU5F1Q01860 360 aaKnown RBP27.42■■□□□ 1.98
HOXB3-201ENST00000311626 MIER3Q7Z3K6 550 aa27.42■■□□□ 1.98
HOXB3-201ENST00000311626 KAT2BQ92831 832 aa27.42■■□□□ 1.98
HOXB3-201ENST00000311626 CCT8L2Q96SF2 557 aa27.42■■□□□ 1.98
HOXB3-201ENST00000311626 CTTNBP2NLQ9P2B4 639 aa27.42■■□□□ 1.98
HOXB3-201ENST00000311626 MYH11P35749 1972 aa27.42■■□□□ 1.98
HOXB3-201ENST00000311626 NFIBO00712 420 aa27.42■■□□□ 1.98
HOXB3-201ENST00000311626 CPXCR1Q8N123 301 aa27.42■■□□□ 1.98
HOXB3-201ENST00000311626 ATP8B4Q8TF62 1192 aa27.42■■□□□ 1.98
HOXB3-201ENST00000311626 BTBD6Q96KE9 485 aa27.42■■□□□ 1.98
HOXB3-201ENST00000311626 SLITRK6Q9H5Y7 841 aa27.42■■□□□ 1.98
HOXB3-201ENST00000311626 SEL1LQ9UBV2 794 aa27.42■■□□□ 1.98
HOXB3-201ENST00000311626 STXBP4Q6ZWJ1 553 aa27.41■■□□□ 1.98
HOXB3-201ENST00000311626 NLRP14Q86W24 1093 aa27.41■■□□□ 1.98
HOXB3-201ENST00000311626 RPUSD2Q8IZ73 545 aaKnown RBP27.41■■□□□ 1.98
HOXB3-201ENST00000311626 TMOD2Q9NZR1 351 aa27.41■■□□□ 1.98
HOXB3-201ENST00000311626 ZNF70Q9UC06 446 aaPredicted RBP27.41■■□□□ 1.98
HOXB3-201ENST00000311626 ODF2LQ9ULJ1 636 aa27.41■■□□□ 1.98
HOXB3-201ENST00000311626 SNX24Q9Y343 169 aa27.41■■□□□ 1.98
HOXB3-201ENST00000311626 ALG6Q9Y672 507 aa27.41■■□□□ 1.98
HOXB3-201ENST00000311626 KRT13P13646 458 aa27.41■■□□□ 1.98
HOXB3-201ENST00000311626 NFIL3Q16649 462 aa27.41■■□□□ 1.98
HOXB3-201ENST00000311626 UBAP2Q5T6F2 1119 aaKnown RBP27.41■■□□□ 1.98
HOXB3-201ENST00000311626 CHURC1Q8WUH1 139 aa27.41■■□□□ 1.98
HOXB3-201ENST00000311626 MXRA8Q9BRK3 442 aa27.41■■□□□ 1.98
HOXB3-201ENST00000311626 KCNH7Q9NS40 1196 aa27.41■■□□□ 1.98
HOXB3-201ENST00000311626 INPP5BP32019 993 aa27.4■■□□□ 1.98
HOXB3-201ENST00000311626 FBXW10Q5XX13 1052 aa27.4■■□□□ 1.98
HOXB3-201ENST00000311626 CHADLQ6NUI6 762 aa27.4■■□□□ 1.98
HOXB3-201ENST00000311626 SPDYE2BA6NHP3 402 aa27.4■■□□□ 1.98
HOXB3-201ENST00000311626 ERLIN2O94905 339 aa27.4■■□□□ 1.98
HOXB3-201ENST00000311626 SGPL1O95470 568 aa27.4■■□□□ 1.98
HOXB3-201ENST00000311626 SPDYE6P0CI01 402 aa27.4■■□□□ 1.98
HOXB3-201ENST00000311626 PPP2R5AQ15172 486 aa27.4■■□□□ 1.98
HOXB3-201ENST00000311626 LRIG3Q6UXM1 1119 aa27.4■■□□□ 1.98
HOXB3-201ENST00000311626 MYCBPAPQ8TBZ2 947 aa27.4■■□□□ 1.98
HOXB3-201ENST00000311626 C18orf8Q96DM3 657 aa27.4■■□□□ 1.98
HOXB3-201ENST00000311626 FAM84AQ96KN4 292 aa27.4■■□□□ 1.98
HOXB3-201ENST00000311626 VCPKMTQ9H867 229 aa27.4■■□□□ 1.98
HOXB3-201ENST00000311626 HERC5Q9UII4 1024 aaKnown RBP27.4■■□□□ 1.98
HOXB3-201ENST00000311626 CALCAP01258 141 aa27.39■■□□□ 1.98
HOXB3-201ENST00000311626 VAMP7P51809 220 aa27.39■■□□□ 1.98
HOXB3-201ENST00000311626 DR1Q01658 176 aa27.39■■□□□ 1.98
HOXB3-201ENST00000311626 MESDQ14696 234 aa27.39■■□□□ 1.98
HOXB3-201ENST00000311626 UHMK1Q8TAS1 419 aaKnown RBP27.39■■□□□ 1.98
HOXB3-201ENST00000311626 PCDHB18PQ96TA0 734 aa27.39■■□□□ 1.98
HOXB3-201ENST00000311626 STRA6Q9BX79 667 aa27.39■■□□□ 1.98
HOXB3-201ENST00000311626 CCPG1Q9ULG6 757 aa27.39■■□□□ 1.98
HOXB3-201ENST00000311626 ZHX2Q9Y6X8 837 aa27.39■■□□□ 1.98
HOXB3-201ENST00000311626 BRWD3Q6RI45 1802 aa27.39■■□□□ 1.98
HOXB3-201ENST00000311626 ANKRD62A6NC57 917 aa27.39■■□□□ 1.98
HOXB3-201ENST00000311626 GUCY2CP25092 1073 aa27.39■■□□□ 1.98
HOXB3-201ENST00000311626 SPP2Q13103 211 aa27.39■■□□□ 1.98
HOXB3-201ENST00000311626 KRT71Q3SY84 523 aa27.39■■□□□ 1.98
HOXB3-201ENST00000311626 C1orf220Q5T0J3 134 aa27.39■■□□□ 1.98
HOXB3-201ENST00000311626 B3GNT9Q6UX72 402 aa27.39■■□□□ 1.98
HOXB3-201ENST00000311626 SHBGP04278 402 aa27.38■■□□□ 1.97
HOXB3-201ENST00000311626 PLTPP55058 493 aa27.38■■□□□ 1.97
HOXB3-201ENST00000311626 MAGOHP61326 146 aaKnown RBP27.38■■□□□ 1.97
HOXB3-201ENST00000311626 SF3A3Q12874 501 aaKnown RBP eCLIP27.38■■□□□ 1.97
HOXB3-201ENST00000311626 KIF22Q14807 665 aa27.38■■□□□ 1.97
HOXB3-201ENST00000311626 MAGOHBQ96A72 148 aaKnown RBP27.38■■□□□ 1.97
HOXB3-201ENST00000311626 SMIM23A6NLE4 172 aa27.38■■□□□ 1.97
HOXB3-201ENST00000311626 SLC16A4O15374 487 aa27.38■■□□□ 1.97
HOXB3-201ENST00000311626 POP1Q99575 1024 aaKnown RBP27.38■■□□□ 1.97
HOXB3-201ENST00000311626 KIFC3Q9BVG8 833 aa27.38■■□□□ 1.97
HOXB3-201ENST00000311626 RNF187Q5TA31 235 aaPredicted RBP27.37■■□□□ 1.97
HOXB3-201ENST00000311626 ZDHHC14Q8IZN3 488 aa27.37■■□□□ 1.97
HOXB3-201ENST00000311626 MDM1Q8TC05 714 aa27.37■■□□□ 1.97
HOXB3-201ENST00000311626 RBBP6Q7Z6E9 1792 aaKnown RBP27.37■■□□□ 1.97
HOXB3-201ENST00000311626 PTENP60484 403 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms