RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 TUBGCP3Q96CW5 907 aa16.42■□□□□ 0.22
HCFC1-201ENST00000310441 ELAC2Q9BQ52 826 aaKnown RBP16.42■□□□□ 0.22
HCFC1-201ENST00000310441 C5orf58C9J3I9 102 aa16.42■□□□□ 0.22
HCFC1-201ENST00000310441 CSTF3Q12996 717 aaKnown RBP16.42■□□□□ 0.22
HCFC1-201ENST00000310441 ZNF699Q32M78 642 aa16.42■□□□□ 0.22
HCFC1-201ENST00000310441 DAB2IPQ5VWQ8 1189 aa16.42■□□□□ 0.22
HCFC1-201ENST00000310441 SARM1Q6SZW1 724 aa16.42■□□□□ 0.22
HCFC1-201ENST00000310441 SDR42E1Q8WUS8 393 aa16.42■□□□□ 0.22
HCFC1-201ENST00000310441 GSPT1P15170 499 aaKnown RBP16.42■□□□□ 0.22
HCFC1-201ENST00000310441 OR6B2Q6IFH4 312 aa16.42■□□□□ 0.22
HCFC1-201ENST00000310441 PNMA6FA0A0J9YX94 578 aa16.42■□□□□ 0.22
HCFC1-201ENST00000310441 TRIM71Q2Q1W2 868 aaKnown RBP16.42■□□□□ 0.22
HCFC1-201ENST00000310441 DNAL1Q4LDG9 190 aa16.42■□□□□ 0.22
HCFC1-201ENST00000310441 NEMP1O14524 444 aa16.42■□□□□ 0.22
HCFC1-201ENST00000310441 MAFGO15525 162 aa16.42■□□□□ 0.22
HCFC1-201ENST00000310441 DNAJC6O75061 913 aa16.42■□□□□ 0.22
HCFC1-201ENST00000310441 CDC27P30260 824 aa16.42■□□□□ 0.22
HCFC1-201ENST00000310441 ST13P5Q8NFI4 369 aaPredicted RBP16.42■□□□□ 0.22
HCFC1-201ENST00000310441 EHD2Q9NZN4 543 aa16.42■□□□□ 0.22
HCFC1-201ENST00000310441 SMG5Q9UPR3 1016 aaKnown RBP16.42■□□□□ 0.22
HCFC1-201ENST00000310441 FTCDO95954 541 aa16.42■□□□□ 0.22
HCFC1-201ENST00000310441 EIF2S1P05198 315 aaKnown RBP16.42■□□□□ 0.22
HCFC1-201ENST00000310441 RAD51Q06609 339 aa16.42■□□□□ 0.22
HCFC1-201ENST00000310441 ALKBH5Q6P6C2 394 aaKnown RBP16.42■□□□□ 0.22
HCFC1-201ENST00000310441 CAB39Q9Y376 341 aaPredicted RBP16.42■□□□□ 0.22
HCFC1-201ENST00000310441 PLCG1P19174 1290 aa16.42■□□□□ 0.22
HCFC1-201ENST00000310441 SERPINB1P30740 379 aa16.42■□□□□ 0.22
HCFC1-201ENST00000310441 PHKA2P46019 1235 aa16.42■□□□□ 0.22
HCFC1-201ENST00000310441 ADCY1Q08828 1119 aa16.42■□□□□ 0.22
HCFC1-201ENST00000310441 AP3B2Q13367 1082 aa16.42■□□□□ 0.22
HCFC1-201ENST00000310441 ZMYND10O75800 440 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 FAM107AO95990 144 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 HSPA13P48723 471 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 APOA5Q6Q788 366 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 THAP11Q96EK4 314 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 ADAM22Q9P0K1 906 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 CNBD2Q96M20 576 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 SLITRK6Q9H5Y7 841 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 WBP4O75554 376 aaKnown RBP16.41■□□□□ 0.22
HCFC1-201ENST00000310441 PCCAP05165 728 aaPredicted RBP16.41■□□□□ 0.22
HCFC1-201ENST00000310441 IL13P35225 146 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 ADD1P35611 737 aaKnown RBP16.41■□□□□ 0.22
HCFC1-201ENST00000310441 CDKL3Q8IVW4 592 aaPredicted RBP16.41■□□□□ 0.22
HCFC1-201ENST00000310441 RSPH1Q8WYR4 309 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 SERPINB13Q9UIV8 391 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 MYH8P13535 1937 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 PLEKHG1Q9ULL1 1385 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 HADHAP40939 763 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 ROR1Q01973 937 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 CYTH1Q15438 398 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 DPCR1Q3MIW9 517 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 CEP78Q5JTW2 689 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 ANKRD13CQ8N6S4 541 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 PCYOX1LQ8NBM8 494 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 GID8Q9NWU2 228 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 PPP4R4Q6NUP7 873 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 CLIC6Q96NY7 704 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 PSMD3O43242 534 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 PDXDC2PQ6P474 469 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 ZNF579Q8NAF0 562 aaKnown RBP16.41■□□□□ 0.22
HCFC1-201ENST00000310441 TBCKQ8TEA7 893 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 LRRC8EQ6NSJ5 796 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 EGFL8Q99944 293 aa16.41■□□□□ 0.22
HCFC1-201ENST00000310441 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.41■□□□□ 0.228e-7■■□□□ 12.1
HCFC1-201ENST00000310441 TAF1DQ9H5J8 278 aaPredicted RBP16.41■□□□□ 0.22
HCFC1-201ENST00000310441 BLVRAP53004 296 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 PRAMEP78395 509 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 SPTLC3Q9NUV7 552 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 BMP3P12645 472 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 SYDE2Q5VT97 1194 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 UGP2Q16851 508 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.4■□□□□ 0.22
HCFC1-201ENST00000310441 SP110Q9HB58 689 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 FNDC3AQ9Y2H6 1198 aaKnown RBP16.4■□□□□ 0.22
HCFC1-201ENST00000310441 PEG3Q9GZU2 1588 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 MFAP3LO75121 409 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 GNL1P36915 607 aaPredicted RBP16.4■□□□□ 0.22
HCFC1-201ENST00000310441 CEBPAP49715 358 aaPredicted RBP16.4■□□□□ 0.22
HCFC1-201ENST00000310441 NCKAP1LP55160 1127 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 HIPK4Q8NE63 616 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 ADNPQ9H2P0 1102 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 ECT2Q9H8V3 914 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 MAP2P11137 1827 aaKnown RBP16.4■□□□□ 0.22
HCFC1-201ENST00000310441 HUS1O60921 280 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 ARFIP2P53365 341 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 ATG3Q9NT62 314 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 SNTNA6NMZ2 147 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 PRPF3O43395 683 aaKnown RBP16.4■□□□□ 0.22
HCFC1-201ENST00000310441 FBLN1P23142 703 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 AP3M2P53677 418 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 PMS2P54278 862 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 STXBP2Q15833 593 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 PPP1R18Q6NYC8 613 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 FAM187AA6NFU0 413 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 TK2O00142 265 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 KCNQ4P56696 695 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 CCDC15Q0P6D6 951 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 ASAP3Q8TDY4 903 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 EPS8L2Q9H6S3 715 aa16.4■□□□□ 0.22
HCFC1-201ENST00000310441 ZWILCHQ9H900 591 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms