RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 DR1Q01658 176 aa13.65□□□□□ -0.23
RETREG3-201ENST00000309428 GIT2Q14161 759 aa13.65□□□□□ -0.23
RETREG3-201ENST00000309428 DRAP1Q14919 205 aaPredicted RBP13.65□□□□□ -0.23
RETREG3-201ENST00000309428 RFX8Q6ZV50 586 aa13.65□□□□□ -0.23
RETREG3-201ENST00000309428 ZNF571Q7Z3V5 609 aaPredicted RBP13.65□□□□□ -0.23
RETREG3-201ENST00000309428 LDHDQ86WU2 507 aa13.65□□□□□ -0.23
RETREG3-201ENST00000309428 PASD1Q8IV76 773 aa13.65□□□□□ -0.23
RETREG3-201ENST00000309428 KAT5Q92993 513 aa13.65□□□□□ -0.23
RETREG3-201ENST00000309428 CHMP6Q96FZ7 201 aa13.65□□□□□ -0.23
RETREG3-201ENST00000309428 DDX23Q9BUQ8 820 aaKnown RBP13.65□□□□□ -0.23
RETREG3-201ENST00000309428 TRIM7Q9C029 511 aa13.65□□□□□ -0.23
RETREG3-201ENST00000309428 POLE2P56282 527 aa13.64□□□□□ -0.23
RETREG3-201ENST00000309428 SPP2Q13103 211 aa13.64□□□□□ -0.23
RETREG3-201ENST00000309428 AP1ARQ63HQ0 302 aa13.64□□□□□ -0.23
RETREG3-201ENST00000309428 TAOK1Q7L7X3 1001 aa13.64□□□□□ -0.23
RETREG3-201ENST00000309428 RAPGEF5Q92565 580 aa13.64□□□□□ -0.23
RETREG3-201ENST00000309428 ZKSCAN4Q969J2 545 aaPredicted RBP13.64□□□□□ -0.23
RETREG3-201ENST00000309428 ERGIC2Q96RQ1 377 aa13.64□□□□□ -0.23
RETREG3-201ENST00000309428 STMN4Q9H169 189 aaPredicted RBP13.64□□□□□ -0.23
RETREG3-201ENST00000309428 PARVGQ9HBI0 331 aa13.64□□□□□ -0.23
RETREG3-201ENST00000309428 HOMER3Q9NSC5 361 aa13.64□□□□□ -0.23
RETREG3-201ENST00000309428 RASGRF2O14827 1237 aa13.64□□□□□ -0.23
RETREG3-201ENST00000309428 TNIP1Q15025 636 aa13.64□□□□□ -0.23
RETREG3-201ENST00000309428 ZNF394Q53GI3 561 aa13.64□□□□□ -0.23
RETREG3-201ENST00000309428 DAB2IPQ5VWQ8 1189 aa13.64□□□□□ -0.23
RETREG3-201ENST00000309428 STAMBPL1Q96FJ0 436 aa13.64□□□□□ -0.23
RETREG3-201ENST00000309428 SPATS2LQ9NUQ6 558 aaKnown RBP13.64□□□□□ -0.23
RETREG3-201ENST00000309428 OSTNP61366 133 aa13.63□□□□□ -0.23
RETREG3-201ENST00000309428 MUM1Q2TAK8 710 aa13.63□□□□□ -0.23
RETREG3-201ENST00000309428 CRY2Q49AN0 593 aa13.63□□□□□ -0.23
RETREG3-201ENST00000309428 JDP2Q8WYK2 163 aa13.63□□□□□ -0.23
RETREG3-201ENST00000309428 SGSM3Q96HU1 749 aa13.63□□□□□ -0.23
RETREG3-201ENST00000309428 ANKFY1Q9P2R3 1169 aa13.63□□□□□ -0.23
RETREG3-201ENST00000309428 AJAP1Q9UKB5 411 aaPredicted RBP13.63□□□□□ -0.23
RETREG3-201ENST00000309428 EDIL3O43854 480 aa13.63□□□□□ -0.23
RETREG3-201ENST00000309428 PDIA5Q14554 519 aa13.63□□□□□ -0.23
RETREG3-201ENST00000309428 IL31RAQ8NI17 732 aa13.63□□□□□ -0.23
RETREG3-201ENST00000309428 CCDC77Q9BR77 488 aa13.63□□□□□ -0.23
RETREG3-201ENST00000309428 UBXN6Q9BZV1 441 aa13.63□□□□□ -0.23
RETREG3-201ENST00000309428 YY1AP1Q9H869 796 aa13.63□□□□□ -0.23
RETREG3-201ENST00000309428 THAP12O43422 761 aa13.63□□□□□ -0.23
RETREG3-201ENST00000309428 SUN1O94901 812 aa13.63□□□□□ -0.23
RETREG3-201ENST00000309428 MYL1P05976 194 aa13.63□□□□□ -0.23
RETREG3-201ENST00000309428 KCNJ1P48048 391 aa13.63□□□□□ -0.23
RETREG3-201ENST00000309428 GABPAQ06546 454 aa13.63□□□□□ -0.23
RETREG3-201ENST00000309428 CDR2LQ86X02 465 aaPredicted RBP13.63□□□□□ -0.23
RETREG3-201ENST00000309428 ANKS1AQ92625 1134 aa13.63□□□□□ -0.23
RETREG3-201ENST00000309428 CEP72Q9P209 647 aa13.63□□□□□ -0.23
RETREG3-201ENST00000309428 DDX20Q9UHI6 824 aaKnown RBP13.63□□□□□ -0.23
RETREG3-201ENST00000309428 ADCY8P40145 1251 aa13.62□□□□□ -0.23
RETREG3-201ENST00000309428 RINT1Q6NUQ1 792 aa13.62□□□□□ -0.23
RETREG3-201ENST00000309428 ZNF365Q70YC5 407 aa13.62□□□□□ -0.23
RETREG3-201ENST00000309428 TEX2Q8IWB9 1127 aa13.62□□□□□ -0.23
RETREG3-201ENST00000309428 LMNTD2Q8IXW0 634 aa13.62□□□□□ -0.23
RETREG3-201ENST00000309428 RNF10Q8N5U6 811 aaKnown RBP13.62□□□□□ -0.23
RETREG3-201ENST00000309428 CBWD1Q9BRT8 395 aa13.62□□□□□ -0.23
RETREG3-201ENST00000309428 NUCKS1Q9H1E3 243 aaKnown RBP13.62□□□□□ -0.23
RETREG3-201ENST00000309428 MAGEF1Q9HAY2 307 aa13.62□□□□□ -0.23
RETREG3-201ENST00000309428 TOPORSQ9NS56 1045 aaPredicted RBP13.62□□□□□ -0.23
RETREG3-201ENST00000309428 GAKO14976 1311 aa13.62□□□□□ -0.23
RETREG3-201ENST00000309428 GCFC2P16383 781 aaKnown RBP13.62□□□□□ -0.23
RETREG3-201ENST00000309428 ADRA2BP18089 450 aa13.62□□□□□ -0.23
RETREG3-201ENST00000309428 DLG4P78352 724 aa13.62□□□□□ -0.23
RETREG3-201ENST00000309428 MYL7Q01449 175 aa13.62□□□□□ -0.23
RETREG3-201ENST00000309428 TTLL12Q14166 644 aaPredicted RBP13.62□□□□□ -0.23
RETREG3-201ENST00000309428 ZRSR2Q15696 482 aaKnown RBP13.62□□□□□ -0.23
RETREG3-201ENST00000309428 KLHDC7AQ5VTJ3 777 aa13.62□□□□□ -0.23
RETREG3-201ENST00000309428 SRRM1Q8IYB3 904 aaKnown RBP13.62□□□□□ -0.23
RETREG3-201ENST00000309428 SYCE1Q8N0S2 351 aa13.62□□□□□ -0.23
RETREG3-201ENST00000309428 UBL4BQ8N7F7 174 aa13.62□□□□□ -0.23
RETREG3-201ENST00000309428 CNKSR1Q969H4 720 aa13.62□□□□□ -0.23
RETREG3-201ENST00000309428 NOD2Q9HC29 1040 aa13.62□□□□□ -0.23
RETREG3-201ENST00000309428 TAS2R14Q9NYV8 317 aa13.62□□□□□ -0.23
RETREG3-201ENST00000309428 ASTN2O75129 1339 aaPredicted RBP13.62□□□□□ -0.23
RETREG3-201ENST00000309428 SCTRP47872 440 aa13.62□□□□□ -0.23
RETREG3-201ENST00000309428 GLE1Q53GS7 698 aaKnown RBP13.62□□□□□ -0.23
RETREG3-201ENST00000309428 DACT2Q5SW24 774 aa13.62□□□□□ -0.23
RETREG3-201ENST00000309428 PADI6Q6TGC4 694 aa13.62□□□□□ -0.23
RETREG3-201ENST00000309428 BAP1Q92560 729 aa13.62□□□□□ -0.23
RETREG3-201ENST00000309428 WDR18Q9BV38 432 aa13.62□□□□□ -0.23
RETREG3-201ENST00000309428 EGFRP00533 1210 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 MARK3P27448 753 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 PALB2Q86YC2 1186 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 SUGP1Q8IWZ8 645 aaKnown RBP13.61□□□□□ -0.23
RETREG3-201ENST00000309428 SLC17A8Q8NDX2 589 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 SLC20A1Q8WUM9 679 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 NAP1L3Q99457 506 aaPredicted RBP13.61□□□□□ -0.23
RETREG3-201ENST00000309428 PAGR1Q9BTK6 254 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 VPS37BQ9H9H4 285 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 ETNK1Q9HBU6 452 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 FGFR1OP2Q9NVK5 253 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 KLHL11Q9NVR0 708 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 CHD4Q14839 1912 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 TCP11X1B4DZS4 312 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 CAND2O75155 1236 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 ERVK-9P63128 1117 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 NIM1KQ8IY84 436 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 ZBTB10Q96DT7 871 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 EMSYQ7Z589 1322 aa13.61□□□□□ -0.23
RETREG3-201ENST00000309428 CEP350Q5VT06 3117 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms