RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 TRIM49P0CI25 452 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 TRIM49CP0CI26 452 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 OTX1P32242 354 aaPredicted RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 TUFMP49411 452 aaKnown RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 SULT1E1P49888 294 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 CDKN1CP49918 316 aaPredicted RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 C4orf17Q53FE4 359 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 ZMAT1Q5H9K5 638 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 BEND6Q5SZJ8 279 aaPredicted RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 TIGD7Q6NT04 549 aaPredicted RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 PRSS55Q6UWB4 352 aaPredicted RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 C1QL4Q86Z23 238 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 FAM26EQ8N5C1 309 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 CCDC197Q8NCU1 140 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 SMCR8Q8TEV9 937 aaPredicted RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 TRIM47Q96LD4 638 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 CRISPLD1Q9H336 500 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 PPP1R9AQ9ULJ8 1098 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 ZMYND8Q9ULU4 1186 aaPredicted RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 DTNAQ9Y4J8 743 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 SAR1BQ9Y6B6 198 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 PMF1-BGLAPU3KQ54 211 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 E9PCH4 1651 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 STK36Q9NRP7 1315 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 CHEK1O14757 476 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 SEMA3EO15041 775 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 TP73O15350 636 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 IPO8O15397 1037 aaKnown RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 S100A9P06702 114 aaKnown RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 TCF7P36402 384 aaPredicted RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 ATP6V1AP38606 617 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 NOP2P46087 812 aaKnown RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 BLKP51451 505 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 HAP1P54257 671 aaPredicted RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 GALEQ14376 348 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 RRS1Q15050 365 aaKnown RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 ATAT1Q5SQI0 421 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 PLEKHA7Q6IQ23 1121 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 TXNDC11Q6PKC3 985 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 MCF2L2Q86YR7 1114 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 P3H2Q8IVL5 708 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 MARVELD2Q8N4S9 558 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 TTC9BQ8N6N2 239 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 FBXO18Q8NFZ0 1043 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 AGAP11Q8TF27 550 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 CENPTQ96BT3 561 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 EDC3Q96F86 508 aaKnown RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 C14orf93Q9H972 538 aaKnown RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 VIPAS39Q9H9C1 493 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 C1orf112Q9NSG2 853 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 GMIPQ9P107 970 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 MAD1L1Q9Y6D9 718 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 SUPT6HQ7KZ85 1726 aaKnown RBP1.41□□□□□ -2.18
CEP290-201ENST00000309041 TIAM1Q13009 1591 aa1.41□□□□□ -2.18
CEP290-201ENST00000309041 PRG4Q92954 1404 aaPredicted RBP1.4□□□□□ -2.18
CEP290-201ENST00000309041 SPATA31A3Q5VYP0 1347 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 SMIM23A6NLE4 172 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 CHURC1-FNTBB4DL54 471 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 CLIC1O00299 241 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 IFIT3O14879 490 aaKnown RBP1.4□□□□□ -2.18
CEP290-201ENST00000309041 ADAMTS3O15072 1205 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 GAGE7O76087 117 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 OR6B1O95007 311 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 GAGE12FP0CL80 117 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 GAGE12GP0CL81 117 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 GAGE12IP0CL82 117 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 CCDC192P0DO97 292 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 ARF4P18085 180 aaPredicted RBP1.4□□□□□ -2.18
CEP290-201ENST00000309041 DGKQP52824 942 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 KCNC4Q03721 635 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 KIF5AQ12840 1032 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 GAGE1Q13065 139 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 GAGE4Q13068 117 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 DEPDC1Q5TB30 811 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 RC3H1Q5TC82 1133 aaKnown RBP1.4□□□□□ -2.18
CEP290-201ENST00000309041 MCTP2Q6DN12 878 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 GPR153Q6NV75 609 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 C15orf52Q6ZUT6 534 aaKnown RBP1.4□□□□□ -2.18
CEP290-201ENST00000309041 ADGRG6Q86SQ4 1221 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 FOXP4Q8IVH2 680 aaPredicted RBP1.4□□□□□ -2.18
CEP290-201ENST00000309041 VPS52Q8N1B4 723 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 OLIG1Q8TAK6 271 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 FNIP1Q8TF40 1166 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 HPS3Q969F9 1004 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 EPSTI1Q96J88 318 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 DNAJC7Q99615 494 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 MAGIXQ9H6Y5 334 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 RMI1Q9H9A7 625 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 SP110Q9HB58 689 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 DDX28Q9NUL7 540 aaKnown RBP1.4□□□□□ -2.18
CEP290-201ENST00000309041 EIF2AK3Q9NZJ5 1116 aaKnown RBP1.4□□□□□ -2.18
CEP290-201ENST00000309041 DDX20Q9UHI6 824 aaKnown RBP1.4□□□□□ -2.18
CEP290-201ENST00000309041 TTC41PQ6P2S7 1318 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 NKX6-3A6NJ46 265 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 WASH4PA8MWX3 477 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 C1QTNF9BB2RNN3 333 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 GAS2O43903 313 aaKnown RBP1.4□□□□□ -2.18
CEP290-201ENST00000309041 SSX5O60225 188 aa1.4□□□□□ -2.18
CEP290-201ENST00000309041 ALDH3B1P43353 468 aa1.4□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms