RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 LRRC41Q15345 812 aa11.21□□□□□ -0.62
APOBEC3F-201ENST00000308521 SLC9C1Q4G0N8 1177 aa11.21□□□□□ -0.62
APOBEC3F-201ENST00000308521 TMEM119Q4V9L6 283 aa11.21□□□□□ -0.62
APOBEC3F-201ENST00000308521 MEI1Q5TIA1 1274 aa11.21□□□□□ -0.62
APOBEC3F-201ENST00000308521 MOXD1Q6UVY6 613 aa11.21□□□□□ -0.62
APOBEC3F-201ENST00000308521 LRRC55Q6ZSA7 311 aa11.21□□□□□ -0.62
APOBEC3F-201ENST00000308521 CACNA2D4Q7Z3S7 1137 aa11.21□□□□□ -0.62
APOBEC3F-201ENST00000308521 ARFGAP2Q8N6H7 521 aa11.21□□□□□ -0.62
APOBEC3F-201ENST00000308521 CASKIN2Q8WXE0 1202 aa11.21□□□□□ -0.62
APOBEC3F-201ENST00000308521 MS4A14Q96JA4 679 aa11.21□□□□□ -0.62
APOBEC3F-201ENST00000308521 ZHX3Q9H4I2 956 aa11.21□□□□□ -0.62
APOBEC3F-201ENST00000308521 PCDHGC5Q9Y5F6 944 aa11.21□□□□□ -0.62
APOBEC3F-201ENST00000308521 DOCK1Q14185 1865 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 KCTD16Q68DU8 428 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 RNF207Q6ZRF8 634 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 NLRP14Q86W24 1093 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 PIGOQ8TEQ8 1089 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 INPP4AQ96PE3 977 aaPredicted RBP11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 TSG101Q99816 390 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 ZNF577Q9BSK1 485 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 LRRC27Q9C0I9 530 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 TMBIM4Q9HC24 238 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 PLCB1Q9NQ66 1216 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 KLC4Q9NSK0 619 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 VAV3Q9UKW4 847 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 ZNF214Q9UL59 606 aaPredicted RBP11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 SPDYE16A6NNV3 312 aaPredicted RBP11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 BTNL10A8MVZ5 291 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 BUB1O43683 1085 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 SORBS3O60504 671 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 FAM107AO95990 144 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 PLA2G4BP0C869 781 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 TNNC1P63316 161 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 MRPS9P82933 396 aaKnown RBP11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 IFFO1Q0D2I5 559 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 KCNMA1Q12791 1236 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 MKRN3Q13064 507 aaKnown RBP11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 ITGB3BPQ13352 177 aaPredicted RBP11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 SLMAPQ14BN4 828 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 SFMBT2Q5VUG0 894 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 OTOP1Q7RTM1 612 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 TPH2Q8IWU9 490 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 IFT81Q8WYA0 676 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 CCT8L2Q96SF2 557 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 RMDN3Q96TC7 470 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 R3HDMLQ9H3Y0 253 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 TAF1DQ9H5J8 278 aaPredicted RBP11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 TMEM59LQ9UK28 342 aa11.2□□□□□ -0.62
APOBEC3F-201ENST00000308521 BHMG1C9JSJ3 638 aaPredicted RBP11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 PALMO75781 387 aa11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 RASSF9O75901 435 aa11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 SNUPNO95149 360 aaKnown RBP11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 IREB2P48200 963 aaKnown RBP11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 GUCY1A3Q02108 690 aa11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 ACTN3Q08043 901 aaPredicted RBP11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 EHHADHQ08426 723 aa11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 NOL9Q5SY16 702 aaKnown RBP11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 CEP85LQ5SZL2 805 aa11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 C6orf89Q6UWU4 347 aa11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 USP50Q70EL3 339 aaPredicted RBP11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 MCF2L2Q86YR7 1114 aa11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 ANKRD13CQ8N6S4 541 aa11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 REPS2Q8NFH8 660 aa11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 MYCBPAPQ8TBZ2 947 aa11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 L3MBTL3Q96JM7 780 aaPredicted RBP11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 FAM20AQ96MK3 541 aa11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 EIF2AK1Q9BQI3 630 aaKnown RBP11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 KCNH7Q9NS40 1196 aa11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 CPSF2Q9P2I0 782 aaKnown RBP11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 IPO5O00410 1097 aaKnown RBP11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 GAS7O60861 476 aa11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 PSMD10O75832 226 aa11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 CLNS1AP54105 237 aaKnown RBP11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 TLDC1Q6P9B6 456 aa11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 USP38Q8NB14 1042 aa11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 DYDC2Q96IM9 177 aa11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 C12orf42Q96LP6 360 aa11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 KRT12Q99456 494 aa11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 SH2D3AQ9BRG2 576 aa11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 FGFBP2Q9BYJ0 223 aa11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 ISCUQ9H1K1 167 aa11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 ACTR5Q9H9F9 607 aaPredicted RBP11.19□□□□□ -0.62
APOBEC3F-201ENST00000308521 TESPA1A2RU30 521 aaPredicted RBP11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 TBX3O15119 743 aa11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 CDR1P51861 262 aa11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 CUL1Q13616 776 aa11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 SLC18A3Q16572 532 aa11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 TDRD12Q587J7 1177 aaKnown RBP11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 GPBP1Q86WP2 473 aa11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 BORCS6Q96GS4 357 aa11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 MXRA8Q9BRK3 442 aa11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 UNC45AQ9H3U1 944 aa11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 MYO1FO00160 1098 aa11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 TLR2O60603 784 aa11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 ATP9AO75110 1047 aa11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 NOL4O94818 638 aa11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 PGM5Q15124 567 aa11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 SLC5A9Q2M3M2 681 aa11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 ARSHQ5FYA8 562 aa11.18□□□□□ -0.62
APOBEC3F-201ENST00000308521 C10orf76Q5T2E6 689 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms