RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 DDX50Q9BQ39 737 aaKnown RBP11.24□□□□□ -0.61
MSRB3-201ENST00000308259 ZWILCHQ9H900 591 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 FAM153AQ9UHL3 310 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 PRELID1Q9Y255 219 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 FLT1P17948 1338 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 USP17L5A8MUK1 530 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 M0R2N6 131 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 DKC1O60832 514 aaKnown RBP eCLIP11.24□□□□□ -0.61
MSRB3-201ENST00000308259 GFPT1Q06210 699 aaPredicted RBP11.24□□□□□ -0.61
MSRB3-201ENST00000308259 PICALMQ13492 652 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 MTMR3Q13615 1198 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 DLGAP5Q15398 846 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 SMC6Q96SB8 1091 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 DMAP1Q9NPF5 467 aaPredicted RBP11.24□□□□□ -0.61
MSRB3-201ENST00000308259 ARHGAP20Q9P2F6 1191 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 SALL4Q9UJQ4 1053 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 EP400Q96L91 3159 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 LIN7AO14910 233 aaPredicted RBP11.24□□□□□ -0.61
MSRB3-201ENST00000308259 MAP3K7O43318 606 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 GRIN3BO60391 1043 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 LDHAP00338 332 aaKnown RBP11.24□□□□□ -0.61
MSRB3-201ENST00000308259 CCNE1P24864 410 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 ADAM9Q13443 819 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 KCTD21Q4G0X4 260 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 C6orf163Q5TEZ5 329 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 SPZ1Q9BXG8 430 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 TTYH3Q9C0H2 523 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 ARHGEF10LQ9HCE6 1279 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 GPCPD1Q9NPB8 672 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 PCMTD2Q9NV79 361 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 PNMA2Q9UL42 364 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 R3HDM2Q9Y2K5 976 aaKnown RBP11.24□□□□□ -0.61
MSRB3-201ENST00000308259 SLC37A4O43826 429 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 SP100P23497 879 aaPredicted RBP11.23□□□□□ -0.61
MSRB3-201ENST00000308259 TSPY1Q01534 308 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 APBB1IPQ7Z5R6 666 aaPredicted RBP11.23□□□□□ -0.61
MSRB3-201ENST00000308259 LRRC34Q8IZ02 419 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 ST13P4Q8IZP2 240 aaPredicted RBP11.23□□□□□ -0.61
MSRB3-201ENST00000308259 CYTH2Q99418 400 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 PYM1Q9BRP8 204 aaKnown RBP11.23□□□□□ -0.61
MSRB3-201ENST00000308259 MMTAG2Q9BU76 263 aaKnown RBP11.23□□□□□ -0.61
MSRB3-201ENST00000308259 RAB17Q9H0T7 212 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 ABCF3Q9NUQ8 709 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 LNPEPQ9UIQ6 1025 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 PACSIN2Q9UNF0 486 aaPredicted RBP11.23□□□□□ -0.61
MSRB3-201ENST00000308259 LZTS1Q9Y250 596 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 MYMKA6NI61 221 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 LRRC53A6NM62 1247 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 TRAPPC3O43617 180 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 NDUFB5O43674 189 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 RASA1P20936 1047 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 FOXD4Q12950 439 aaPredicted RBP11.23□□□□□ -0.61
MSRB3-201ENST00000308259 BIRC3Q13489 604 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 NONOQ15233 471 aaKnown RBP eCLIP11.23□□□□□ -0.61
MSRB3-201ENST00000308259 UBE2SQ16763 222 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 PHLDB3Q6NSJ2 640 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 KCNK18Q7Z418 384 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 GDAP1Q8TB36 358 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 METTL5Q9NRN9 209 aaKnown RBP11.23□□□□□ -0.61
MSRB3-201ENST00000308259 RBM12Q9NTZ6 932 aaKnown RBP11.23□□□□□ -0.61
MSRB3-201ENST00000308259 A0A1W2PQC6 194 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 A0A1W2PRG0 241 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 GHRP10912 638 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 CLCN2P51788 898 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 RCN1Q15293 331 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 DGKHQ86XP1 1220 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 NELFCDQ8IXH7 590 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 SCYL3Q8IZE3 742 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 LRRC43Q8N309 656 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 CEP95Q96GE4 821 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 ABHD8Q96I13 439 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 NOX5Q96PH1 765 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 SYT15Q9BQS2 421 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 ZHX3Q9H4I2 956 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 CNOT10Q9H9A5 744 aaKnown RBP11.23□□□□□ -0.61
MSRB3-201ENST00000308259 SUCLA2Q9P2R7 463 aaPredicted RBP11.23□□□□□ -0.61
MSRB3-201ENST00000308259 SATB2Q9UPW6 733 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 XIRP1Q702N8 1843 aaKnown RBP11.23□□□□□ -0.61
MSRB3-201ENST00000308259 CHN1P15882 459 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 NAT1P18440 290 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 FUT4P22083 530 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 CCNFP41002 786 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 RFX8Q6ZV50 586 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 CCNJLQ8IV13 435 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 PDCD7Q8N8D1 485 aaKnown RBP11.23□□□□□ -0.61
MSRB3-201ENST00000308259 GSDMBQ8TAX9 411 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 TEKT1Q969V4 418 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 PCDHA13Q9Y5I0 950 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 PLCH1Q4KWH8 1693 aa11.23□□□□□ -0.61
MSRB3-201ENST00000308259 TRIM43BA6NCK2 446 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 PDE5AO76074 875 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 PCP11498 1178 aaKnown RBP11.22□□□□□ -0.61
MSRB3-201ENST00000308259 KIF11P52732 1056 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 EHHADHQ08426 723 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 PAPD7Q5XG87 772 aaKnown RBP11.22□□□□□ -0.61
MSRB3-201ENST00000308259 POTEAQ6S8J7 498 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 OTUD6AQ7L8S5 288 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 NEK8Q86SG6 692 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 ATP6V0A1Q93050 837 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 PRMT1Q99873 361 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms