RNA–Protein interactions for RNA: ENST00000306329.15

MTCL1-201, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MTCL1, Length 5,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-201ENST00000306329 SDC4P31431 198 aa21.78■■□□□ 1.08
MTCL1-201ENST00000306329 PDIA2Q13087 525 aaKnown RBP21.78■■□□□ 1.08
MTCL1-201ENST00000306329 NBPF9Q3BBW0 867 aa21.78■■□□□ 1.08
MTCL1-201ENST00000306329 ZC3H12BQ5HYM0 836 aaKnown RBP21.78■■□□□ 1.08
MTCL1-201ENST00000306329 NUDCD3Q8IVD9 361 aa21.78■■□□□ 1.08
MTCL1-201ENST00000306329 MRPL40Q9NQ50 206 aaKnown RBP21.78■■□□□ 1.08
MTCL1-201ENST00000306329 TOPORSQ9NS56 1045 aaPredicted RBP21.78■■□□□ 1.08
MTCL1-201ENST00000306329 SFMBT1Q9UHJ3 866 aa21.78■■□□□ 1.08
MTCL1-201ENST00000306329 POTEB3A0JP26 581 aa21.78■■□□□ 1.08
MTCL1-201ENST00000306329 POTECB2RU33 542 aa21.78■■□□□ 1.08
MTCL1-201ENST00000306329 POTEBQ6S5H4 581 aa21.78■■□□□ 1.08
MTCL1-201ENST00000306329 CYB5R4Q7L1T6 521 aa21.78■■□□□ 1.08
MTCL1-201ENST00000306329 TMEM47Q9BQJ4 181 aa21.78■■□□□ 1.08
MTCL1-201ENST00000306329 COA1Q9GZY4 146 aa21.78■■□□□ 1.08
MTCL1-201ENST00000306329 INTS2Q9H0H0 1204 aaKnown RBP21.78■■□□□ 1.08
MTCL1-201ENST00000306329 CHGBP05060 677 aa21.77■■□□□ 1.08
MTCL1-201ENST00000306329 DAB2P98082 770 aa21.77■■□□□ 1.08
MTCL1-201ENST00000306329 LRRC31Q6UY01 552 aa21.77■■□□□ 1.08
MTCL1-201ENST00000306329 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.77■■□□□ 1.08
MTCL1-201ENST00000306329 SEPT8Q92599 483 aa21.77■■□□□ 1.08
MTCL1-201ENST00000306329 ECT2Q9H8V3 914 aa21.77■■□□□ 1.08
MTCL1-201ENST00000306329 KIF17Q9P2E2 1029 aa21.77■■□□□ 1.08
MTCL1-201ENST00000306329 HDAC6Q9UBN7 1215 aa21.77■■□□□ 1.08
MTCL1-201ENST00000306329 ZBED8Q8IZ13 594 aa21.77■■□□□ 1.08
MTCL1-201ENST00000306329 LZICQ8WZA0 190 aa21.77■■□□□ 1.08
MTCL1-201ENST00000306329 CALR3Q96L12 384 aaKnown RBP21.77■■□□□ 1.08
MTCL1-201ENST00000306329 CYP4F11Q9HBI6 524 aa21.77■■□□□ 1.08
MTCL1-201ENST00000306329 COG4Q9H9E3 785 aa21.77■■□□□ 1.08
MTCL1-201ENST00000306329 VAMP7P51809 220 aa21.77■■□□□ 1.08
MTCL1-201ENST00000306329 AP2B1P63010 937 aa21.77■■□□□ 1.08
MTCL1-201ENST00000306329 DRAP1Q14919 205 aaPredicted RBP21.77■■□□□ 1.08
MTCL1-201ENST00000306329 NLRP14Q86W24 1093 aa21.77■■□□□ 1.08
MTCL1-201ENST00000306329 FAM167AQ96KS9 214 aa21.77■■□□□ 1.08
MTCL1-201ENST00000306329 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.77■■□□□ 1.083e-6■■□□□ 12.9
MTCL1-201ENST00000306329 FAM167BQ9BTA0 163 aa21.77■■□□□ 1.08
MTCL1-201ENST00000306329 SLC13A1Q9BZW2 595 aa21.77■■□□□ 1.08
MTCL1-201ENST00000306329 STK36Q9NRP7 1315 aa21.77■■□□□ 1.08
MTCL1-201ENST00000306329 DENND3A2RUS2 1198 aa21.77■■□□□ 1.07
MTCL1-201ENST00000306329 NAALADL2Q58DX5 795 aa21.77■■□□□ 1.07
MTCL1-201ENST00000306329 CIAPIN1Q6FI81 312 aa21.77■■□□□ 1.07
MTCL1-201ENST00000306329 QTRT2Q9H974 415 aaKnown RBP21.77■■□□□ 1.07
MTCL1-201ENST00000306329 RAVER2Q9HCJ3 691 aaKnown RBP21.77■■□□□ 1.07
MTCL1-201ENST00000306329 TMEM260Q9NX78 707 aa21.77■■□□□ 1.07
MTCL1-201ENST00000306329 PHKA2P46019 1235 aa21.76■■□□□ 1.07
MTCL1-201ENST00000306329 STXBP2Q15833 593 aa21.76■■□□□ 1.07
MTCL1-201ENST00000306329 KNOP1Q1ED39 458 aaKnown RBP21.76■■□□□ 1.07
MTCL1-201ENST00000306329 HEATR6Q6AI08 1181 aaKnown RBP21.76■■□□□ 1.07
MTCL1-201ENST00000306329 NR1H4Q96RI1 486 aaPredicted RBP21.76■■□□□ 1.07
MTCL1-201ENST00000306329 HPCAL4Q9UM19 191 aa21.76■■□□□ 1.07
MTCL1-201ENST00000306329 PVALEFA0A1B0GWK0 134 aa21.76■■□□□ 1.07
MTCL1-201ENST00000306329 PSMC1P62191 440 aaKnown RBP21.76■■□□□ 1.07
MTCL1-201ENST00000306329 ACTN3Q08043 901 aaPredicted RBP21.76■■□□□ 1.07
MTCL1-201ENST00000306329 SLC10A5Q5PT55 438 aa21.76■■□□□ 1.07
MTCL1-201ENST00000306329 MAGEB5Q9BZ81 275 aa21.76■■□□□ 1.07
MTCL1-201ENST00000306329 KRT14P02533 472 aa21.76■■□□□ 1.07
MTCL1-201ENST00000306329 FTLP02792 175 aaPredicted RBP21.76■■□□□ 1.07
MTCL1-201ENST00000306329 GNA15P30679 374 aa21.76■■□□□ 1.07
MTCL1-201ENST00000306329 CHRNA3P32297 505 aa21.76■■□□□ 1.07
MTCL1-201ENST00000306329 AARSP49588 968 aaKnown RBP eCLIP21.76■■□□□ 1.07
MTCL1-201ENST00000306329 ASNSP08243 561 aa21.76■■□□□ 1.07
MTCL1-201ENST00000306329 TSR3Q9UJK0 312 aaKnown RBP21.76■■□□□ 1.07
MTCL1-201ENST00000306329 UNC13AQ9UPW8 1703 aa21.75■■□□□ 1.07
MTCL1-201ENST00000306329 EIF4E1BA6NMX2 242 aaKnown RBP21.75■■□□□ 1.07
MTCL1-201ENST00000306329 E5RI56 91 aa21.75■■□□□ 1.07
MTCL1-201ENST00000306329 PYGLP06737 847 aa21.75■■□□□ 1.07
MTCL1-201ENST00000306329 AP1B1Q10567 949 aa21.75■■□□□ 1.07
MTCL1-201ENST00000306329 NAF1Q96HR8 494 aaKnown RBP21.75■■□□□ 1.07
MTCL1-201ENST00000306329 IP6K2Q9UHH9 426 aa21.75■■□□□ 1.07
MTCL1-201ENST00000306329 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.75■■□□□ 1.07
MTCL1-201ENST00000306329 GRID2IPA4D2P6 1211 aa21.75■■□□□ 1.07
MTCL1-201ENST00000306329 BPIFA3Q9BQP9 254 aa21.75■■□□□ 1.07
MTCL1-201ENST00000306329 ETNK1Q9HBU6 452 aa21.75■■□□□ 1.07
MTCL1-201ENST00000306329 TMCC1O94876 653 aa21.75■■□□□ 1.07
MTCL1-201ENST00000306329 ROR1Q01973 937 aa21.75■■□□□ 1.07
MTCL1-201ENST00000306329 ZMAT2Q96NC0 199 aaKnown RBP21.75■■□□□ 1.07
MTCL1-201ENST00000306329 NMT2O60551 498 aa21.75■■□□□ 1.07
MTCL1-201ENST00000306329 TWF2Q6IBS0 349 aaKnown RBP21.75■■□□□ 1.07
MTCL1-201ENST00000306329 TAF1DQ9H5J8 278 aaPredicted RBP21.75■■□□□ 1.07
MTCL1-201ENST00000306329 MAN1A2O60476 641 aa21.75■■□□□ 1.07
MTCL1-201ENST00000306329 HLA-DPA1P20036 260 aa21.75■■□□□ 1.07
MTCL1-201ENST00000306329 GNL1P36915 607 aaPredicted RBP21.75■■□□□ 1.07
MTCL1-201ENST00000306329 TSPY1Q01534 308 aa21.75■■□□□ 1.07
MTCL1-201ENST00000306329 BEST2Q8NFU1 509 aa21.75■■□□□ 1.07
MTCL1-201ENST00000306329 SLC26A7Q8TE54 656 aa21.75■■□□□ 1.07
MTCL1-201ENST00000306329 TEX12Q9BXU0 123 aa21.75■■□□□ 1.07
MTCL1-201ENST00000306329 USP17L10C9JJH3 530 aa21.74■■□□□ 1.07
MTCL1-201ENST00000306329 C1orf228Q6PIY5 440 aa21.74■■□□□ 1.07
MTCL1-201ENST00000306329 FMR1NBQ8N0W7 255 aaPredicted RBP21.74■■□□□ 1.07
MTCL1-201ENST00000306329 SNF8Q96H20 258 aa21.74■■□□□ 1.07
MTCL1-201ENST00000306329 EGFL8Q99944 293 aa21.74■■□□□ 1.07
MTCL1-201ENST00000306329 GCOM2Q9BZD3 368 aaPredicted RBP21.74■■□□□ 1.07
MTCL1-201ENST00000306329 EPC1Q9H2F5 836 aa21.74■■□□□ 1.07
MTCL1-201ENST00000306329 STX18Q9P2W9 335 aaKnown RBP21.74■■□□□ 1.07
MTCL1-201ENST00000306329 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.74■■□□□ 1.07
MTCL1-201ENST00000306329 TXNRD1Q16881 649 aa21.74■■□□□ 1.07
MTCL1-201ENST00000306329 NBPF10Q6P3W6 841 aaKnown RBP21.74■■□□□ 1.07
MTCL1-201ENST00000306329 TEX2Q8IWB9 1127 aa21.74■■□□□ 1.07
MTCL1-201ENST00000306329 CHCHD3Q9NX63 227 aaKnown RBP21.74■■□□□ 1.07
MTCL1-201ENST00000306329 NDE1Q9NXR1 346 aa21.74■■□□□ 1.07
MTCL1-201ENST00000306329 ITM2BQ9Y287 266 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms