RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 TRIM39Q9HCM9 518 aa14.2□□□□□ -0.14
TRIM56-201ENST00000306085 PIPSLA2A3N6 862 aa14.2□□□□□ -0.14
TRIM56-201ENST00000306085 ARF5P84085 180 aa14.2□□□□□ -0.14
TRIM56-201ENST00000306085 CACNB1Q02641 598 aaPredicted RBP14.2□□□□□ -0.14
TRIM56-201ENST00000306085 ELMSAN1Q6PJG2 1045 aa14.2□□□□□ -0.14
TRIM56-201ENST00000306085 CASP10Q92851 521 aa14.2□□□□□ -0.14
TRIM56-201ENST00000306085 PCDHA1Q9Y5I3 950 aa14.2□□□□□ -0.14
TRIM56-201ENST00000306085 GAP43P17677 238 aa14.2□□□□□ -0.14
TRIM56-201ENST00000306085 KLHL38Q2WGJ6 581 aa14.2□□□□□ -0.14
TRIM56-201ENST00000306085 NACC1Q96RE7 527 aa14.2□□□□□ -0.14
TRIM56-201ENST00000306085 MRPL1Q9BYD6 325 aaKnown RBP14.2□□□□□ -0.14
TRIM56-201ENST00000306085 CFAP73A6NFT4 308 aa14.2□□□□□ -0.14
TRIM56-201ENST00000306085 TTC23LQ6PF05 361 aa14.2□□□□□ -0.14
TRIM56-201ENST00000306085 FKBP9O95302 570 aa14.2□□□□□ -0.14
TRIM56-201ENST00000306085 MRPS35P82673 323 aaKnown RBP14.2□□□□□ -0.14
TRIM56-201ENST00000306085 FKBP9P1Q75LS8 142 aa14.2□□□□□ -0.14
TRIM56-201ENST00000306085 LRRC49Q8IUZ0 686 aa14.2□□□□□ -0.14
TRIM56-201ENST00000306085 DTNAQ9Y4J8 743 aa14.2□□□□□ -0.14
TRIM56-201ENST00000306085 KLRF2D3W0D1 207 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 TEX28O15482 410 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 CERKLQ49MI3 558 aaPredicted RBP14.19□□□□□ -0.14
TRIM56-201ENST00000306085 PCDHA7Q9UN72 937 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 TCP10L2B9ZVM9 353 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 HPCAP84074 193 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 GSPT2Q8IYD1 628 aaKnown RBP14.19□□□□□ -0.14
TRIM56-201ENST00000306085 MICU2Q8IYU8 434 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 SPICE1Q8N0Z3 855 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 ATAD2BQ9ULI0 1458 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 ARHGEF37A1IGU5 675 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 TMEM154Q6P9G4 183 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 EMBQ6PCB8 327 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 BNIPLQ7Z465 357 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 SERPINB13Q9UIV8 391 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 MARK3P27448 753 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 TNFAIP1Q13829 316 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 DISP3Q9P2K9 1392 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 GMNCA6NCL1 334 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 DHX36Q9H2U1 1008 aaKnown RBP14.19□□□□□ -0.14
TRIM56-201ENST00000306085 SP110Q9HB58 689 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 SCAF11Q99590 1463 aaKnown RBP14.19□□□□□ -0.14
TRIM56-201ENST00000306085 ABCC12Q96J65 1359 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 VN1R5Q7Z5H4 357 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 RPF1Q9H9Y2 349 aaKnown RBP14.19□□□□□ -0.14
TRIM56-201ENST00000306085 ALG13Q9NP73 1137 aaKnown RBP14.19□□□□□ -0.14
TRIM56-201ENST00000306085 DNALI1O14645 258 aaPredicted RBP14.19□□□□□ -0.14
TRIM56-201ENST00000306085 PPIP5K2O43314 1243 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 LRRC59Q96AG4 307 aaKnown RBP14.19□□□□□ -0.14
TRIM56-201ENST00000306085 HEMGNQ9BXL5 484 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 PODXLO00592 558 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 SNPHO15079 494 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 CMA1P23946 247 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 PPP2R2AP63151 447 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 KLC1Q07866 573 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 TRIM63Q969Q1 353 aa14.19□□□□□ -0.14
TRIM56-201ENST00000306085 C10orf53Q8N6V4 93 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 DHTKD1Q96HY7 919 aaPredicted RBP14.18□□□□□ -0.14
TRIM56-201ENST00000306085 VPS50Q96JG6 964 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 RNF14Q9UBS8 474 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 ANAPC7Q9UJX3 599 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 MAN2A1Q16706 1144 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 NDUFA5Q16718 116 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 PNMA1Q8ND90 353 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 SCNN1DP51172 638 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 ERICH1Q86X53 443 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 PDCD10Q9BUL8 212 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 MROH5Q6ZUA9 1318 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 DFFAO00273 331 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 KBTBD3Q8NAB2 608 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 S100A9P06702 114 aaKnown RBP14.18□□□□□ -0.14
TRIM56-201ENST00000306085 ATP6V1B1P15313 513 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 ALDH6A1Q02252 535 aaKnown RBP14.18□□□□□ -0.14
TRIM56-201ENST00000306085 COG2Q14746 738 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 CYP26B1Q9NR63 512 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 AOX1Q06278 1338 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 SH3TC1Q8TE82 1336 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 CCND2P30279 289 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 FEN1P39748 380 aaKnown RBP14.18□□□□□ -0.14
TRIM56-201ENST00000306085 SLFN12LQ6IEE8 588 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 RSPH10B2B2RC85 870 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 SGSM2O43147 1006 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 CCDC22O60826 627 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 RSPH10BP0C881 870 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 HMOX2P30519 316 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 MED23Q9ULK4 1368 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 TARSL2A2RTX5 802 aaKnown RBP14.18□□□□□ -0.14
TRIM56-201ENST00000306085 FAM107AO95990 144 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 ABCE1P61221 599 aaKnown RBP14.18□□□□□ -0.14
TRIM56-201ENST00000306085 FBXO38Q6PIJ6 1188 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 ADCK2Q7Z695 626 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 SDR42E1Q8WUS8 393 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 TCN1P20061 433 aaPredicted RBP14.18□□□□□ -0.14
TRIM56-201ENST00000306085 ICA1Q05084 483 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 STX12Q86Y82 276 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 LPIN2Q92539 896 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 CROCCQ5TZA2 2017 aa14.18□□□□□ -0.14
TRIM56-201ENST00000306085 PCDH11XQ9BZA7 1347 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 PCDH11YQ9BZA8 1340 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 PUDPQ08623 228 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 IL1RL2Q9HB29 575 aa14.17□□□□□ -0.14
TRIM56-201ENST00000306085 IMPAD1Q9NX62 359 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms