RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

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Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 HOXD13P35453 343 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 IFI16Q16666 785 aaKnown RBP17.5■□□□□ 0.39
LONRF3-201ENST00000304778 KDM7AQ6ZMT4 941 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 FUKQ8N0W3 1084 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 CPXCR1Q8N123 301 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 PIK3R5Q8WYR1 880 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 KIAA1683Q9H0B3 1180 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 DEFB129Q9H1M3 183 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 BCAS3Q9H6U6 928 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 TPX2Q9ULW0 747 aaKnown RBP17.5■□□□□ 0.39
LONRF3-201ENST00000304778 ATP8B3O60423 1300 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 RSPH10B2B2RC85 870 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 NFIBO00712 420 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 PDXKO00764 312 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 CALUO43852 315 aaPredicted RBP17.5■□□□□ 0.39
LONRF3-201ENST00000304778 PPP1R12BO60237 982 aaPredicted RBP17.5■□□□□ 0.39
LONRF3-201ENST00000304778 CTNND1O60716 968 aaKnown RBP17.5■□□□□ 0.39
LONRF3-201ENST00000304778 GAS7O60861 476 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 RSPH10BP0C881 870 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 PRKCIP41743 596 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 HSD17B4P51659 736 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 PPP2R5CQ13362 524 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 NBPF12Q5TAG4 269 aaPredicted RBP17.5■□□□□ 0.39
LONRF3-201ENST00000304778 CCDC121Q6ZUS5 278 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 CCDC125Q86Z20 511 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 LPAR1Q92633 364 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 ZNF577Q9BSK1 485 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 COL20A1Q9P218 1284 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 NAGPAQ9UK23 515 aa17.5■□□□□ 0.39
LONRF3-201ENST00000304778 LRRC57Q8N9N7 239 aa17.49■□□□□ 0.39
LONRF3-201ENST00000304778 CLEC4DQ8WXI8 215 aa17.49■□□□□ 0.39
LONRF3-201ENST00000304778 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.49■□□□□ 0.39
LONRF3-201ENST00000304778 PBKQ96KB5 322 aa17.49■□□□□ 0.39
LONRF3-201ENST00000304778 HAUS2Q9NVX0 235 aa17.49■□□□□ 0.39
LONRF3-201ENST00000304778 GOLGA6L7A0A1B0GV03 622 aa17.49■□□□□ 0.39
LONRF3-201ENST00000304778 E7EVH7 732 aa17.49■□□□□ 0.39
LONRF3-201ENST00000304778 ZBTB39O15060 712 aa17.49■□□□□ 0.39
LONRF3-201ENST00000304778 ANXA13P27216 316 aa17.49■□□□□ 0.39
LONRF3-201ENST00000304778 EIF1ADQ8N9N8 165 aaKnown RBP17.49■□□□□ 0.39
LONRF3-201ENST00000304778 RBM46Q8TBY0 533 aaKnown RBP17.49■□□□□ 0.39
LONRF3-201ENST00000304778 RAVER2Q9HCJ3 691 aaKnown RBP17.49■□□□□ 0.39
LONRF3-201ENST00000304778 TUFT1Q9NNX1 390 aa17.49■□□□□ 0.39
LONRF3-201ENST00000304778 FBXL5Q9UKA1 691 aa17.49■□□□□ 0.39
LONRF3-201ENST00000304778 FZD9O00144 591 aa17.49■□□□□ 0.39
LONRF3-201ENST00000304778 FLOT1O75955 427 aa17.49■□□□□ 0.39
LONRF3-201ENST00000304778 AKAP3O75969 853 aa17.49■□□□□ 0.39
LONRF3-201ENST00000304778 GBP2P32456 591 aaPredicted RBP17.49■□□□□ 0.39
LONRF3-201ENST00000304778 INHBEP58166 350 aa17.49■□□□□ 0.39
LONRF3-201ENST00000304778 EPHA7Q15375 998 aa17.49■□□□□ 0.39
LONRF3-201ENST00000304778 BMT2Q1RMZ1 405 aa17.49■□□□□ 0.39
LONRF3-201ENST00000304778 DCAF17Q5H9S7 520 aaPredicted RBP17.49■□□□□ 0.39
LONRF3-201ENST00000304778 ALKBH5Q6P6C2 394 aaKnown RBP17.49■□□□□ 0.39
LONRF3-201ENST00000304778 TLDC1Q6P9B6 456 aa17.49■□□□□ 0.39
LONRF3-201ENST00000304778 KLHL7Q8IXQ5 586 aa17.49■□□□□ 0.39
LONRF3-201ENST00000304778 TAF1DQ9H5J8 278 aaPredicted RBP17.49■□□□□ 0.39
LONRF3-201ENST00000304778 TYW1Q9NV66 732 aaKnown RBP17.49■□□□□ 0.39
LONRF3-201ENST00000304778 ALAS1P13196 640 aa17.48■□□□□ 0.39
LONRF3-201ENST00000304778 NR1D1P20393 614 aa17.48■□□□□ 0.39
LONRF3-201ENST00000304778 MTMR2Q13614 643 aa17.48■□□□□ 0.39
LONRF3-201ENST00000304778 C6orf89Q6UWU4 347 aa17.48■□□□□ 0.39
LONRF3-201ENST00000304778 ACTRT1Q8TDG2 376 aa17.48■□□□□ 0.39
LONRF3-201ENST00000304778 ISCUQ9H1K1 167 aa17.48■□□□□ 0.39
LONRF3-201ENST00000304778 UNC45AQ9H3U1 944 aa17.48■□□□□ 0.39
LONRF3-201ENST00000304778 METTL14Q9HCE5 456 aaKnown RBP17.48■□□□□ 0.39
LONRF3-201ENST00000304778 NENFQ9UMX5 172 aa17.48■□□□□ 0.39
LONRF3-201ENST00000304778 ASTN1O14525 1302 aa17.48■□□□□ 0.39
LONRF3-201ENST00000304778 SLC16A3O15427 465 aaKnown RBP17.48■□□□□ 0.39
LONRF3-201ENST00000304778 HSPA9P38646 679 aaKnown RBP17.48■□□□□ 0.39
LONRF3-201ENST00000304778 RINT1Q6NUQ1 792 aa17.48■□□□□ 0.39
LONRF3-201ENST00000304778 DDX42Q86XP3 938 aaKnown RBP eCLIP17.48■□□□□ 0.39
LONRF3-201ENST00000304778 C1orf131Q8NDD1 294 aaKnown RBP17.48■□□□□ 0.39
LONRF3-201ENST00000304778 SCFD2Q8WU76 684 aa17.48■□□□□ 0.39
LONRF3-201ENST00000304778 MXRA8Q9BRK3 442 aa17.48■□□□□ 0.39
LONRF3-201ENST00000304778 LRRC4CQ9HCJ2 640 aa17.48■□□□□ 0.39
LONRF3-201ENST00000304778 HOMER2Q9NSB8 354 aa17.48■□□□□ 0.39
LONRF3-201ENST00000304778 DNM1LO00429 736 aa17.47■□□□□ 0.39
LONRF3-201ENST00000304778 FAM107AO95990 144 aa17.47■□□□□ 0.39
LONRF3-201ENST00000304778 NR3C1P04150 777 aa17.47■□□□□ 0.39
LONRF3-201ENST00000304778 EMC10Q5UCC4 262 aa17.47■□□□□ 0.39
LONRF3-201ENST00000304778 CALR3Q96L12 384 aaKnown RBP17.47■□□□□ 0.39
LONRF3-201ENST00000304778 SFI1A8K8P3 1242 aa17.47■□□□□ 0.39
LONRF3-201ENST00000304778 ITGB5P18084 799 aa17.47■□□□□ 0.39
LONRF3-201ENST00000304778 TMOD1P28289 359 aa17.47■□□□□ 0.39
LONRF3-201ENST00000304778 JAM2P57087 298 aa17.47■□□□□ 0.39
LONRF3-201ENST00000304778 ERVK-9P63128 1117 aa17.47■□□□□ 0.39
LONRF3-201ENST00000304778 DRP2Q13474 957 aa17.47■□□□□ 0.39
LONRF3-201ENST00000304778 CCDC50Q8IVM0 306 aa17.47■□□□□ 0.39
LONRF3-201ENST00000304778 TPCN2Q8NHX9 752 aa17.47■□□□□ 0.39
LONRF3-201ENST00000304778 IL31RAQ8NI17 732 aa17.47■□□□□ 0.39
LONRF3-201ENST00000304778 SLC35C1Q96A29 364 aa17.47■□□□□ 0.39
LONRF3-201ENST00000304778 ATP6V0A4Q9HBG4 840 aa17.47■□□□□ 0.39
LONRF3-201ENST00000304778 SLC38A10Q9HBR0 1119 aa17.47■□□□□ 0.39
LONRF3-201ENST00000304778 SIX2Q9NPC8 291 aa17.47■□□□□ 0.39
LONRF3-201ENST00000304778 WRAP73Q9P2S5 460 aaPredicted RBP17.47■□□□□ 0.39
LONRF3-201ENST00000304778 CD2APQ9Y5K6 639 aa17.47■□□□□ 0.39
LONRF3-201ENST00000304778 LTBP3Q9NS15 1303 aa17.47■□□□□ 0.39
LONRF3-201ENST00000304778 IPO5O00410 1097 aaKnown RBP17.46■□□□□ 0.39
LONRF3-201ENST00000304778 TBCAO75347 108 aaKnown RBP17.46■□□□□ 0.39
LONRF3-201ENST00000304778 ZBTB48P10074 688 aaPredicted RBP17.46■□□□□ 0.39
LONRF3-201ENST00000304778 VCAM1P19320 739 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms