RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 JAK2O60674 1132 aa18.6■□□□□ 0.57
TRAPPC1-201ENST00000303731 ERVFC1P60507 584 aa18.6■□□□□ 0.57
TRAPPC1-201ENST00000303731 MXD4Q14582 209 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC1-201ENST00000303731 XKR9Q5GH70 373 aa18.6■□□□□ 0.57
TRAPPC1-201ENST00000303731 RBM23Q86U06 439 aaKnown RBP18.6■□□□□ 0.57
TRAPPC1-201ENST00000303731 KSR1Q8IVT5 923 aa18.6■□□□□ 0.57
TRAPPC1-201ENST00000303731 MTRQ99707 1265 aa18.6■□□□□ 0.57
TRAPPC1-201ENST00000303731 TCF25Q9BQ70 676 aa18.6■□□□□ 0.57
TRAPPC1-201ENST00000303731 LRFN3Q9BTN0 628 aa18.6■□□□□ 0.57
TRAPPC1-201ENST00000303731 TTC12Q9H892 705 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC1-201ENST00000303731 ENTPD7Q9NQZ7 604 aa18.6■□□□□ 0.57
TRAPPC1-201ENST00000303731 RGL1Q9NZL6 768 aa18.6■□□□□ 0.57
TRAPPC1-201ENST00000303731 CLEC1BQ9P126 229 aa18.6■□□□□ 0.57
TRAPPC1-201ENST00000303731 SLITRK3O94933 977 aa18.59■□□□□ 0.57
TRAPPC1-201ENST00000303731 CYP4A11Q02928 519 aa18.59■□□□□ 0.57
TRAPPC1-201ENST00000303731 LAMTOR4Q0VGL1 99 aa18.59■□□□□ 0.57
TRAPPC1-201ENST00000303731 ORC2Q13416 577 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC1-201ENST00000303731 CTTNQ14247 550 aaKnown RBP18.59■□□□□ 0.57
TRAPPC1-201ENST00000303731 TMEM184AQ6ZMB5 413 aa18.59■□□□□ 0.57
TRAPPC1-201ENST00000303731 FERMT3Q86UX7 667 aa18.59■□□□□ 0.57
TRAPPC1-201ENST00000303731 TPH2Q8IWU9 490 aa18.59■□□□□ 0.57
TRAPPC1-201ENST00000303731 SLC39A11Q8N1S5 342 aa18.59■□□□□ 0.57
TRAPPC1-201ENST00000303731 KHSRPQ92945 711 aaKnown RBP eCLIP18.59■□□□□ 0.57
TRAPPC1-201ENST00000303731 TMEM143Q96AN5 459 aa18.59■□□□□ 0.57
TRAPPC1-201ENST00000303731 CCDC43Q96MW1 224 aaKnown RBP18.59■□□□□ 0.57
TRAPPC1-201ENST00000303731 HSD17B14Q9BPX1 270 aa18.59■□□□□ 0.57
TRAPPC1-201ENST00000303731 EIF2AK1Q9BQI3 630 aaKnown RBP18.59■□□□□ 0.57
TRAPPC1-201ENST00000303731 ANKEF1Q9NU02 776 aa18.59■□□□□ 0.57
TRAPPC1-201ENST00000303731 STK39Q9UEW8 545 aa18.59■□□□□ 0.57
TRAPPC1-201ENST00000303731 HCN4Q9Y3Q4 1203 aa18.59■□□□□ 0.57
TRAPPC1-201ENST00000303731 ARIH1Q9Y4X5 557 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC1-201ENST00000303731 C5orf42Q9H799 3197 aa18.58■□□□□ 0.57
TRAPPC1-201ENST00000303731 CNTNAP2Q9UHC6 1331 aa18.58■□□□□ 0.57
TRAPPC1-201ENST00000303731 DCXO43602 365 aa18.58■□□□□ 0.56
TRAPPC1-201ENST00000303731 DGAT1O75907 488 aa18.58■□□□□ 0.56
TRAPPC1-201ENST00000303731 GLP2RO95838 553 aa18.58■□□□□ 0.56
TRAPPC1-201ENST00000303731 SRGAP2CP0DJJ0 459 aa18.58■□□□□ 0.56
TRAPPC1-201ENST00000303731 POU5F1BQ06416 359 aa18.58■□□□□ 0.56
TRAPPC1-201ENST00000303731 TFDP1Q14186 410 aa18.58■□□□□ 0.56
TRAPPC1-201ENST00000303731 SMC1AQ14683 1233 aaKnown RBP18.58■□□□□ 0.56
TRAPPC1-201ENST00000303731 PLPP4Q5VZY2 271 aa18.58■□□□□ 0.56
TRAPPC1-201ENST00000303731 TMC7Q7Z402 723 aa18.58■□□□□ 0.56
TRAPPC1-201ENST00000303731 ZNF579Q8NAF0 562 aaKnown RBP18.58■□□□□ 0.56
TRAPPC1-201ENST00000303731 CNNM3Q8NE01 707 aa18.58■□□□□ 0.56
TRAPPC1-201ENST00000303731 TMEM169Q96HH4 297 aa18.58■□□□□ 0.56
TRAPPC1-201ENST00000303731 ZSCAN31Q96LW9 406 aaPredicted RBP18.58■□□□□ 0.56
TRAPPC1-201ENST00000303731 PCDHGC5Q9Y5F6 944 aa18.58■□□□□ 0.56
TRAPPC1-201ENST00000303731 PRR33A8MZF0 331 aa18.57■□□□□ 0.56
TRAPPC1-201ENST00000303731 DTNBO60941 627 aa18.57■□□□□ 0.56
TRAPPC1-201ENST00000303731 ERLIN2O94905 339 aa18.57■□□□□ 0.56
TRAPPC1-201ENST00000303731 SEC24BO95487 1268 aa18.57■□□□□ 0.56
TRAPPC1-201ENST00000303731 XRCC6P12956 609 aaKnown RBP eCLIP18.57■□□□□ 0.56
TRAPPC1-201ENST00000303731 AXLP30530 894 aa18.57■□□□□ 0.56
TRAPPC1-201ENST00000303731 TXKP42681 527 aa18.57■□□□□ 0.56
TRAPPC1-201ENST00000303731 BCAR1P56945 870 aa18.57■□□□□ 0.56
TRAPPC1-201ENST00000303731 HMGN5P82970 282 aaKnown RBP18.57■□□□□ 0.56
TRAPPC1-201ENST00000303731 NCBP1Q09161 790 aaKnown RBP18.57■□□□□ 0.56
TRAPPC1-201ENST00000303731 NOMO2Q5JPE7 1267 aa18.57■□□□□ 0.56
TRAPPC1-201ENST00000303731 RNF149Q8NC42 400 aa18.57■□□□□ 0.56
TRAPPC1-201ENST00000303731 URGCPQ8TCY9 931 aa18.57■□□□□ 0.56
TRAPPC1-201ENST00000303731 CCDC51Q96ER9 411 aa18.57■□□□□ 0.56
TRAPPC1-201ENST00000303731 C8orf76Q96K31 380 aa18.57■□□□□ 0.56
TRAPPC1-201ENST00000303731 MTMR9Q96QG7 549 aa18.57■□□□□ 0.56
TRAPPC1-201ENST00000303731 UBN1Q9NPG3 1134 aa18.57■□□□□ 0.56
TRAPPC1-201ENST00000303731 SH2B1Q9NRF2 756 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC1-201ENST00000303731 BARX2Q9UMQ3 279 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC1-201ENST00000303731 PCDHB2Q9Y5E7 798 aa18.57■□□□□ 0.56
TRAPPC1-201ENST00000303731 PER2O15055 1255 aa18.56■□□□□ 0.56
TRAPPC1-201ENST00000303731 HOXB8P17481 243 aaPredicted RBP18.56■□□□□ 0.56
TRAPPC1-201ENST00000303731 RNASELQ05823 741 aaKnown RBP18.56■□□□□ 0.56
TRAPPC1-201ENST00000303731 GIT2Q14161 759 aa18.56■□□□□ 0.56
TRAPPC1-201ENST00000303731 MRPL10Q7Z7H8 261 aaKnown RBP18.56■□□□□ 0.56
TRAPPC1-201ENST00000303731 IFNLR1Q8IU57 520 aaPredicted RBP18.56■□□□□ 0.56
TRAPPC1-201ENST00000303731 FOXP1Q9H334 677 aaPredicted RBP18.56■□□□□ 0.56
TRAPPC1-201ENST00000303731 TBC1D13Q9NVG8 400 aa18.56■□□□□ 0.56
TRAPPC1-201ENST00000303731 KANSL3Q9P2N6 904 aa18.56■□□□□ 0.56
TRAPPC1-201ENST00000303731 ZC3H11AO75152 810 aaKnown RBP eCLIP18.55■□□□□ 0.56
TRAPPC1-201ENST00000303731 OFD1O75665 1012 aa18.55■□□□□ 0.56
TRAPPC1-201ENST00000303731 PBX3P40426 434 aa18.55■□□□□ 0.56
TRAPPC1-201ENST00000303731 PTENP60484 403 aa18.55■□□□□ 0.56
TRAPPC1-201ENST00000303731 ST3GAL1Q11201 340 aa18.55■□□□□ 0.56
TRAPPC1-201ENST00000303731 KCNC3Q14003 757 aa18.55■□□□□ 0.56
TRAPPC1-201ENST00000303731 CCDC83Q8IWF9 413 aa18.55■□□□□ 0.56
TRAPPC1-201ENST00000303731 MRPL43Q8N983 215 aaKnown RBP18.55■□□□□ 0.56
TRAPPC1-201ENST00000303731 CASP10Q92851 521 aa18.55■□□□□ 0.56
TRAPPC1-201ENST00000303731 LPPQ93052 612 aa18.55■□□□□ 0.56
TRAPPC1-201ENST00000303731 NFKBIZQ9BYH8 718 aa18.55■□□□□ 0.56
TRAPPC1-201ENST00000303731 C11orf16Q9NQ32 467 aa18.55■□□□□ 0.56
TRAPPC1-201ENST00000303731 BMP2KQ9NSY1 1161 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC1-201ENST00000303731 USP15Q9Y4E8 981 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC1-201ENST00000303731 HIDE1A8MVS5 230 aa18.54■□□□□ 0.56
TRAPPC1-201ENST00000303731 HOXA11P31270 313 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC1-201ENST00000303731 RBM25P49756 843 aaKnown RBP18.54■□□□□ 0.56
TRAPPC1-201ENST00000303731 RARRES1P49788 294 aa18.54■□□□□ 0.56
TRAPPC1-201ENST00000303731 FOSBP53539 338 aa18.54■□□□□ 0.56
TRAPPC1-201ENST00000303731 NOTUMQ6P988 496 aa18.54■□□□□ 0.56
TRAPPC1-201ENST00000303731 PHF7Q9BWX1 381 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC1-201ENST00000303731 MINDY3Q9H8M7 445 aa18.54■□□□□ 0.56
TRAPPC1-201ENST00000303731 RSAD1Q9HA92 442 aa18.54■□□□□ 0.56
TRAPPC1-201ENST00000303731 TUFT1Q9NNX1 390 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms