RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 TXNDC9O14530 226 aa15.49■□□□□ 0.07
CDT1-201ENST00000301019 HNRNPH3P31942 346 aaKnown RBP15.49■□□□□ 0.07
CDT1-201ENST00000301019 EIF3BP55884 814 aaKnown RBP15.49■□□□□ 0.07
CDT1-201ENST00000301019 RTP1P59025 263 aa15.49■□□□□ 0.07
CDT1-201ENST00000301019 C6orf118Q5T5N4 469 aa15.49■□□□□ 0.07
CDT1-201ENST00000301019 DNAJC14Q6Y2X3 702 aaPredicted RBP15.49■□□□□ 0.07
CDT1-201ENST00000301019 C4orf33Q8N1A6 199 aa15.49■□□□□ 0.07
CDT1-201ENST00000301019 UBN1Q9NPG3 1134 aa15.49■□□□□ 0.07
CDT1-201ENST00000301019 CCDC87Q9NVE4 849 aa15.49■□□□□ 0.07
CDT1-201ENST00000301019 PRPF3O43395 683 aaKnown RBP15.49■□□□□ 0.07
CDT1-201ENST00000301019 TPD52L2O43399 206 aaKnown RBP15.49■□□□□ 0.07
CDT1-201ENST00000301019 PGM3O95394 542 aa15.49■□□□□ 0.07
CDT1-201ENST00000301019 LCA5LO95447 670 aa15.49■□□□□ 0.07
CDT1-201ENST00000301019 SETSIPP0DME0 302 aa15.49■□□□□ 0.07
CDT1-201ENST00000301019 GYS1P13807 737 aa15.49■□□□□ 0.07
CDT1-201ENST00000301019 VSTM1Q6UX27 236 aa15.49■□□□□ 0.07
CDT1-201ENST00000301019 LRP10Q7Z4F1 713 aa15.49■□□□□ 0.07
CDT1-201ENST00000301019 GLYCTKQ8IVS8 523 aa15.49■□□□□ 0.07
CDT1-201ENST00000301019 HIPK4Q8NE63 616 aa15.49■□□□□ 0.07
CDT1-201ENST00000301019 CEP70Q8NHQ1 597 aa15.49■□□□□ 0.07
CDT1-201ENST00000301019 CCDC97Q96F63 343 aaPredicted RBP15.49■□□□□ 0.07
CDT1-201ENST00000301019 NUDT12Q9BQG2 462 aa15.49■□□□□ 0.07
CDT1-201ENST00000301019 GPR108Q9NPR9 543 aa15.49■□□□□ 0.07
CDT1-201ENST00000301019 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.49■□□□□ 0.073e-10■■■□□ 15.8
CDT1-201ENST00000301019 C4AP0C0L4 1744 aa15.48■□□□□ 0.07
CDT1-201ENST00000301019 C4BP0C0L5 1744 aa15.48■□□□□ 0.07
CDT1-201ENST00000301019 TBX10O75333 385 aa15.48■□□□□ 0.07
CDT1-201ENST00000301019 SERPINB3P29508 390 aa15.48■□□□□ 0.07
CDT1-201ENST00000301019 TMED2Q15363 201 aa15.48■□□□□ 0.07
CDT1-201ENST00000301019 DCAF12L1Q5VU92 463 aa15.48■□□□□ 0.07
CDT1-201ENST00000301019 ZDHHC24Q6UX98 284 aa15.48■□□□□ 0.07
CDT1-201ENST00000301019 LCA5Q86VQ0 697 aa15.48■□□□□ 0.07
CDT1-201ENST00000301019 SPATA5Q8NB90 893 aa15.48■□□□□ 0.07
CDT1-201ENST00000301019 ZNF333Q96JL9 665 aa15.48■□□□□ 0.07
CDT1-201ENST00000301019 NPHS2Q9NP85 383 aa15.48■□□□□ 0.07
CDT1-201ENST00000301019 GSTTP1A0A1W2PQM5 241 aa15.48■□□□□ 0.07
CDT1-201ENST00000301019 TJP3O95049 919 aa15.48■□□□□ 0.07
CDT1-201ENST00000301019 SKIP12755 728 aa15.48■□□□□ 0.07
CDT1-201ENST00000301019 KLRC3Q07444 240 aa15.48■□□□□ 0.07
CDT1-201ENST00000301019 FUT2Q10981 343 aa15.48■□□□□ 0.07
CDT1-201ENST00000301019 CTTNQ14247 550 aaKnown RBP15.48■□□□□ 0.07
CDT1-201ENST00000301019 FAM182AQ5T1J6 154 aa15.48■□□□□ 0.07
CDT1-201ENST00000301019 CNNM4Q6P4Q7 775 aa15.48■□□□□ 0.07
CDT1-201ENST00000301019 MTDHQ86UE4 582 aaKnown RBP15.48■□□□□ 0.07
CDT1-201ENST00000301019 WDR60Q8WVS4 1066 aa15.48■□□□□ 0.07
CDT1-201ENST00000301019 CENPTQ96BT3 561 aa15.48■□□□□ 0.07
CDT1-201ENST00000301019 C9orf72Q96LT7 481 aa15.48■□□□□ 0.07
CDT1-201ENST00000301019 AGBL1Q96MI9 1066 aa15.48■□□□□ 0.07
CDT1-201ENST00000301019 NAGPAQ9UK23 515 aa15.48■□□□□ 0.07
CDT1-201ENST00000301019 A0A0G2JND7 137 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 SSU72P8A0A1W2PR75 194 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 RIPK2O43353 540 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 UBE3CQ15386 1083 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 VPS72Q15906 364 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 ARMCX6Q7L4S7 300 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 C4orf32Q8N8J7 132 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 ACTRT1Q8TDG2 376 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 PRR11Q96HE9 360 aaPredicted RBP15.47■□□□□ 0.07
CDT1-201ENST00000301019 IKZF4Q9H2S9 585 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 AMFRQ9UKV5 643 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 AGTP01019 485 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 TMEM266Q2M3C6 531 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 ZNF365Q70YC5 407 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 PHLDB2Q86SQ0 1253 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 GBP7Q8N8V2 638 aaPredicted RBP15.47■□□□□ 0.07
CDT1-201ENST00000301019 ATL2Q8NHH9 583 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 CTNNBL1Q8WYA6 563 aaPredicted RBP15.47■□□□□ 0.07
CDT1-201ENST00000301019 ALG3Q92685 438 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 SMC6Q96SB8 1091 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 ZDHHC18Q9NUE0 388 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 TXLNGQ9NUQ3 528 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 NKIRAS1Q9NYS0 192 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 IGSF9BQ9UPX0 1349 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 TCRBV5S4A2TA0A5A2 114 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 CYP2D6P10635 497 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 GALK1P51570 392 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 TROAPQ12815 778 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 THOC5Q13769 683 aaKnown RBP15.47■□□□□ 0.07
CDT1-201ENST00000301019 FIGNQ5HY92 759 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 TAB3Q8N5C8 712 aaPredicted RBP15.47■□□□□ 0.07
CDT1-201ENST00000301019 PIGBQ92521 554 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 KRT35Q92764 455 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 STMN2Q93045 179 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 MCUR1Q96AQ8 359 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 MPP4Q96JB8 637 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 USP21Q9UK80 565 aa15.47■□□□□ 0.07
CDT1-201ENST00000301019 AJAP1Q9UKB5 411 aaPredicted RBP15.47■□□□□ 0.07
CDT1-201ENST00000301019 TOGARAM1Q9Y4F4 1720 aa15.46■□□□□ 0.07
CDT1-201ENST00000301019 ATMINO43313 823 aaPredicted RBP15.46■□□□□ 0.07
CDT1-201ENST00000301019 IMPDH2P12268 514 aa15.46■□□□□ 0.07
CDT1-201ENST00000301019 CHKAP35790 457 aa15.46■□□□□ 0.07
CDT1-201ENST00000301019 RASSF2P50749 326 aa15.46■□□□□ 0.07
CDT1-201ENST00000301019 ACSBG2Q5FVE4 666 aa15.46■□□□□ 0.07
CDT1-201ENST00000301019 TMTC3Q6ZXV5 915 aa15.46■□□□□ 0.07
CDT1-201ENST00000301019 KCNK18Q7Z418 384 aa15.46■□□□□ 0.07
CDT1-201ENST00000301019 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.46■□□□□ 0.079e-7■■■■■ 110.9
CDT1-201ENST00000301019 PGM2Q96G03 612 aa15.46■□□□□ 0.07
CDT1-201ENST00000301019 BTBD6Q96KE9 485 aa15.46■□□□□ 0.07
CDT1-201ENST00000301019 USP40Q9NVE5 1235 aa15.46■□□□□ 0.07
CDT1-201ENST00000301019 NIP7Q9Y221 180 aaKnown RBP eCLIP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms