RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 GOLGA6DP0CG33 693 aa23.82■■□□□ 1.4
TPM4-201ENST00000300933 BFSP1Q12934 665 aa23.82■■□□□ 1.4
TPM4-201ENST00000300933 ALKBH5Q6P6C2 394 aaKnown RBP23.82■■□□□ 1.4
TPM4-201ENST00000300933 GOLGA6AQ9NYA3 693 aa23.82■■□□□ 1.4
TPM4-201ENST00000300933 NAGPAQ9UK23 515 aa23.82■■□□□ 1.4
TPM4-201ENST00000300933 DOCK5Q9H7D0 1870 aa23.82■■□□□ 1.4
TPM4-201ENST00000300933 EVI5O60447 810 aa23.82■■□□□ 1.4
TPM4-201ENST00000300933 JAM2P57087 298 aa23.82■■□□□ 1.4
TPM4-201ENST00000300933 CNTN2Q02246 1040 aa23.82■■□□□ 1.4
TPM4-201ENST00000300933 SAAL1Q96ER3 474 aa23.82■■□□□ 1.4
TPM4-201ENST00000300933 EMSYQ7Z589 1322 aa23.81■■□□□ 1.4
TPM4-201ENST00000300933 PPP3CAQ08209 521 aa23.81■■□□□ 1.4
TPM4-201ENST00000300933 PHLDB3Q6NSJ2 640 aa23.81■■□□□ 1.4
TPM4-201ENST00000300933 APOBEC3FQ8IUX4 373 aaKnown RBP23.81■■□□□ 1.4
TPM4-201ENST00000300933 PLEKHO2Q8TD55 490 aa23.81■■□□□ 1.4
TPM4-201ENST00000300933 U2AF1L4Q8WU68 220 aaKnown RBP23.81■■□□□ 1.4
TPM4-201ENST00000300933 DBR1Q9UK59 544 aaKnown RBP23.81■■□□□ 1.4
TPM4-201ENST00000300933 MCM3P25205 808 aa23.81■■□□□ 1.4
TPM4-201ENST00000300933 CCND2P30279 289 aa23.81■■□□□ 1.4
TPM4-201ENST00000300933 TREML2Q5T2D2 321 aa23.81■■□□□ 1.4
TPM4-201ENST00000300933 GLYCTKQ8IVS8 523 aa23.81■■□□□ 1.4
TPM4-201ENST00000300933 BSNDQ8WZ55 320 aa23.81■■□□□ 1.4
TPM4-201ENST00000300933 LRRC1Q9BTT6 524 aa23.81■■□□□ 1.4
TPM4-201ENST00000300933 INTS2Q9H0H0 1204 aaKnown RBP23.81■■□□□ 1.4
TPM4-201ENST00000300933 CYP39A1Q9NYL5 469 aa23.81■■□□□ 1.4
TPM4-201ENST00000300933 GOLGA6BA6NDN3 693 aa23.8■■□□□ 1.4
TPM4-201ENST00000300933 ANKRD63C9JTQ0 380 aa23.8■■□□□ 1.4
TPM4-201ENST00000300933 DDX3XO00571 662 aaKnown RBP eCLIP23.8■■□□□ 1.43e-12■■■■□ 25.2
TPM4-201ENST00000300933 ERLIN2O94905 339 aa23.8■■□□□ 1.4
TPM4-201ENST00000300933 IRAK1P51617 712 aa23.8■■□□□ 1.4
TPM4-201ENST00000300933 MYL7Q01449 175 aa23.8■■□□□ 1.4
TPM4-201ENST00000300933 CKAP4Q07065 602 aaKnown RBP23.8■■□□□ 1.4
TPM4-201ENST00000300933 CCDC181Q5TID7 509 aa23.8■■□□□ 1.4
TPM4-201ENST00000300933 CATSPERGQ6ZRH7 1159 aa23.8■■□□□ 1.4
TPM4-201ENST00000300933 KAT2BQ92831 832 aa23.8■■□□□ 1.4
TPM4-201ENST00000300933 CEP170P1Q96L14 293 aa23.8■■□□□ 1.4
TPM4-201ENST00000300933 POP1Q99575 1024 aaKnown RBP23.8■■□□□ 1.4
TPM4-201ENST00000300933 TMOD4Q9NZQ9 345 aa23.8■■□□□ 1.4
TPM4-201ENST00000300933 HYOU1Q9Y4L1 999 aa23.8■■□□□ 1.4
TPM4-201ENST00000300933 C4orf19Q8IY42 314 aa23.8■■□□□ 1.4
TPM4-201ENST00000300933 SPATA4Q8NEY3 305 aa23.8■■□□□ 1.4
TPM4-201ENST00000300933 CCDC127Q96BQ5 260 aa23.8■■□□□ 1.4
TPM4-201ENST00000300933 MOV10L1Q9BXT6 1211 aaKnown RBP23.8■■□□□ 1.4
TPM4-201ENST00000300933 SEPT11Q9NVA2 429 aaKnown RBP23.8■■□□□ 1.4
TPM4-201ENST00000300933 HSPBP1Q9NZL4 362 aa23.8■■□□□ 1.4
TPM4-201ENST00000300933 PCDHA10Q9Y5I2 948 aa23.8■■□□□ 1.4
TPM4-201ENST00000300933 LTBP3Q9NS15 1303 aa23.79■■□□□ 1.4
TPM4-201ENST00000300933 GRID2IPA4D2P6 1211 aa23.79■■□□□ 1.4
TPM4-201ENST00000300933 SPDYE16A6NNV3 312 aaPredicted RBP23.79■■□□□ 1.4
TPM4-201ENST00000300933 SP2Q02086 613 aa23.79■■□□□ 1.4
TPM4-201ENST00000300933 NSUN6Q8TEA1 469 aaKnown RBP23.79■■□□□ 1.4
TPM4-201ENST00000300933 ACCSQ96QU6 501 aa23.79■■□□□ 1.4
TPM4-201ENST00000300933 R3HDMLQ9H3Y0 253 aa23.79■■□□□ 1.4
TPM4-201ENST00000300933 F8VZ95 297 aa23.79■■□□□ 1.4
TPM4-201ENST00000300933 CCNI2Q6ZMN8 369 aaPredicted RBP23.79■■□□□ 1.4
TPM4-201ENST00000300933 MMS22LQ6ZRQ5 1243 aa23.79■■□□□ 1.4
TPM4-201ENST00000300933 BCAS4Q8TDM0 211 aa23.79■■□□□ 1.4
TPM4-201ENST00000300933 ZNF526Q8TF50 670 aaPredicted RBP23.79■■□□□ 1.4
TPM4-201ENST00000300933 MKNK1Q9BUB5 465 aa23.79■■□□□ 1.4
TPM4-201ENST00000300933 GINM1Q9NU53 330 aa23.79■■□□□ 1.4
TPM4-201ENST00000300933 GEMIN8Q9NWZ8 242 aaKnown RBP23.79■■□□□ 1.4
TPM4-201ENST00000300933 DMGDHQ9UI17 866 aaKnown RBP23.79■■□□□ 1.4
TPM4-201ENST00000300933 FAM169AQ9Y6X4 670 aa23.79■■□□□ 1.4
TPM4-201ENST00000300933 KIAA1217Q5T5P2 1943 aa23.78■■□□□ 1.4
TPM4-201ENST00000300933 EBAG9O00559 213 aa23.78■■□□□ 1.4
TPM4-201ENST00000300933 USP2O75604 605 aaPredicted RBP23.78■■□□□ 1.4
TPM4-201ENST00000300933 KRT76Q01546 638 aa23.78■■□□□ 1.4
TPM4-201ENST00000300933 CBWD2Q8IUF1 395 aa23.78■■□□□ 1.4
TPM4-201ENST00000300933 CCDC60Q8IWA6 550 aaPredicted RBP23.78■■□□□ 1.4
TPM4-201ENST00000300933 RNF10Q8N5U6 811 aaKnown RBP23.78■■□□□ 1.4
TPM4-201ENST00000300933 KAT5Q92993 513 aa23.78■■□□□ 1.4
TPM4-201ENST00000300933 TEX13BQ9BXU2 312 aa23.78■■□□□ 1.4
TPM4-201ENST00000300933 GPR88Q9GZN0 384 aa23.78■■□□□ 1.4
TPM4-201ENST00000300933 MAP3K20Q9NYL2 800 aaKnown RBP23.78■■□□□ 1.4
TPM4-201ENST00000300933 AFG3L2Q9Y4W6 797 aa23.78■■□□□ 1.4
TPM4-201ENST00000300933 SSC5DA1L4H1 1573 aa23.78■■□□□ 1.4
TPM4-201ENST00000300933 ADM5C9JUS6 153 aa23.78■■□□□ 1.4
TPM4-201ENST00000300933 KCNA2P16389 499 aa23.78■■□□□ 1.4
TPM4-201ENST00000300933 ABCB4P21439 1286 aa23.78■■□□□ 1.4
TPM4-201ENST00000300933 NPTX2P47972 431 aa23.78■■□□□ 1.4
TPM4-201ENST00000300933 VGLL4Q14135 290 aa23.78■■□□□ 1.4
TPM4-201ENST00000300933 FBXW10Q5XX13 1052 aa23.78■■□□□ 1.4
TPM4-201ENST00000300933 PALB2Q86YC2 1186 aa23.78■■□□□ 1.4
TPM4-201ENST00000300933 ACP6Q9NPH0 428 aa23.78■■□□□ 1.4
TPM4-201ENST00000300933 LUC7LQ9NQ29 371 aaKnown RBP23.78■■□□□ 1.4
TPM4-201ENST00000300933 FOXN3O00409 490 aaPredicted RBP23.77■■□□□ 1.4
TPM4-201ENST00000300933 CPP00450 1065 aa23.77■■□□□ 1.4
TPM4-201ENST00000300933 KRT13P13646 458 aa23.77■■□□□ 1.4
TPM4-201ENST00000300933 ADSSP30520 456 aa23.77■■□□□ 1.4
TPM4-201ENST00000300933 VAMP7P51809 220 aa23.77■■□□□ 1.4
TPM4-201ENST00000300933 JAK3P52333 1124 aa23.77■■□□□ 1.4
TPM4-201ENST00000300933 MOB2Q70IA6 237 aa23.77■■□□□ 1.4
TPM4-201ENST00000300933 LNX1Q8TBB1 728 aaPredicted RBP23.77■■□□□ 1.4
TPM4-201ENST00000300933 INPP4AQ96PE3 977 aaPredicted RBP23.77■■□□□ 1.4
TPM4-201ENST00000300933 RBM12Q9NTZ6 932 aaKnown RBP23.77■■□□□ 1.4
TPM4-201ENST00000300933 DOCK1Q14185 1865 aa23.77■■□□□ 1.4
TPM4-201ENST00000300933 RLFQ13129 1914 aa23.77■■□□□ 1.4
TPM4-201ENST00000300933 USP8P40818 1118 aa23.77■■□□□ 1.4
TPM4-201ENST00000300933 STAT1P42224 750 aa23.77■■□□□ 1.4
TPM4-201ENST00000300933 ARHGEF19Q8IW93 802 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms