RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 TRMT13Q9NUP7 481 aaKnown RBP6.6□□□□□ -1.35
SSX3-201ENST00000298396 SETD4Q9NVD3 440 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 ERAP1Q9NZ08 941 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 GTF2IRD1Q9UHL9 959 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 CEP131Q9UPN4 1083 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 SAMM50Q9Y512 469 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 CITO14578 2027 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 KIAA1671Q9BY89 1806 aa6.6□□□□□ -1.35
SSX3-201ENST00000298396 MYO9BQ13459 2157 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 TTC3P53804 2025 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 A0A1W2PRU2 124 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 E9PMD0 336 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 ST8SIA5O15466 376 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 TREHO43280 583 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 CUTAO60888 179 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 GADD45BO75293 160 aaPredicted RBP6.59□□□□□ -1.35
SSX3-201ENST00000298396 C22orf31O95567 290 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 INSRRP14616 1297 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 PLCG1P19174 1290 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 NCLP19338 710 aaKnown RBP6.59□□□□□ -1.35
SSX3-201ENST00000298396 CCT6AP40227 531 aaKnown RBP6.59□□□□□ -1.35
SSX3-201ENST00000298396 GDF10P55107 478 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 CHMP4BP1P59074 171 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 PSMC5P62195 406 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 TLE2Q04725 743 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 PPFIA1Q13136 1202 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 DRP2Q13474 957 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 GRIK4Q16099 956 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 BRDTQ58F21 947 aaPredicted RBP6.59□□□□□ -1.35
SSX3-201ENST00000298396 FAM160B1Q5W0V3 765 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 TRMT1LQ7Z2T5 733 aaKnown RBP6.59□□□□□ -1.35
SSX3-201ENST00000298396 ANKRD33Q7Z3H0 272 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 NECAB2Q7Z6G3 386 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 CABP7Q86V35 215 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 TPH2Q8IWU9 490 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 C4orf19Q8IY42 314 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 TMEM87AQ8NBN3 555 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 NEK9Q8TD19 979 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 KCNG4Q8TDN1 519 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 PIGOQ8TEQ8 1089 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 VWCEQ96DN2 955 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 AK8Q96MA6 479 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 GLT1D1Q96MS3 346 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 ARID3AQ99856 593 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 NIFKQ9BYG3 293 aaKnown RBP6.59□□□□□ -1.35
SSX3-201ENST00000298396 OSBPL7Q9BZF2 842 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 CCSER1Q9C0I3 900 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 AZI2Q9H6S1 392 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 TUFT1Q9NNX1 390 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 ATP13A2Q9NQ11 1180 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 XPNPEP1Q9NQW7 623 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 PDLIM7Q9NR12 457 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 DDX19AQ9NUU7 478 aaKnown RBP6.59□□□□□ -1.35
SSX3-201ENST00000298396 CFAP45Q9UL16 551 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 ZNF215Q9UL58 517 aaPredicted RBP6.59□□□□□ -1.35
SSX3-201ENST00000298396 HPSEQ9Y251 543 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 FNDC1Q4ZHG4 1894 aaPredicted RBP6.59□□□□□ -1.35
SSX3-201ENST00000298396 TRIOBPQ9H2D6 2365 aa6.59□□□□□ -1.35
SSX3-201ENST00000298396 COL1A2P08123 1366 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 UMODL1Q5DID0 1318 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 IGKV6-21A0A0C4DH24 114 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 FAM237AA0A1B0GTK4 181 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 TRIM43BA6NCK2 446 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 HBP1O60381 514 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 CYP2C9P11712 490 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 CAPN2P17655 700 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 ITGB8P26012 769 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 YWHABP31946 246 aaKnown RBP6.58□□□□□ -1.36
SSX3-201ENST00000298396 ME1P48163 572 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 RARRES1P49788 294 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 RGS19P49795 217 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 SLC26A2P50443 739 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 RNF144AP50876 292 aaPredicted RBP6.58□□□□□ -1.36
SSX3-201ENST00000298396 IGBP1P78318 339 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 FAAP100Q0VG06 881 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 ARSHQ5FYA8 562 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 XKR3Q5GH77 459 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 MTHFD1LQ6UB35 978 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 SERINC5Q86VE9 423 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 TPCN2Q8NHX9 752 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 ATP6V0A1Q93050 837 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 TRIM43Q96BQ3 446 aaPredicted RBP6.58□□□□□ -1.36
SSX3-201ENST00000298396 FAM167AQ96KS9 214 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 RUSC1Q9BVN2 902 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 KATNAL1Q9BW62 490 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 PANK2Q9BZ23 570 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 SCAND2PQ9GZW5 306 aaPredicted RBP6.58□□□□□ -1.36
SSX3-201ENST00000298396 DHX33Q9H6R0 707 aaKnown RBP6.58□□□□□ -1.36
SSX3-201ENST00000298396 ZSWIM4Q9H7M6 989 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 POLD4Q9HCU8 107 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 CYP26B1Q9NR63 512 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 ZNF358Q9NW07 568 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 TCEAL9Q9UHQ7 104 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 DBR1Q9UK59 544 aaKnown RBP6.58□□□□□ -1.36
SSX3-201ENST00000298396 TBX21Q9UL17 535 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 NOVA2Q9UNW9 492 aaKnown RBP6.58□□□□□ -1.36
SSX3-201ENST00000298396 USTQ9Y2C2 406 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 ATP6V1DQ9Y5K8 247 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 ATG2AQ2TAZ0 1938 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 LAMA2P24043 3122 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms