RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 PNMA2Q9UL42 364 aa26.4■■□□□ 1.82
SPTSSA-201ENST00000298130 GOLGA8IPA6NC78 632 aa26.39■■□□□ 1.82
SPTSSA-201ENST00000298130 GOLGA8JA6NMD2 632 aa26.39■■□□□ 1.82
SPTSSA-201ENST00000298130 TUFT1Q9NNX1 390 aa26.39■■□□□ 1.82
SPTSSA-201ENST00000298130 AFF2P51816 1311 aa26.39■■□□□ 1.82
SPTSSA-201ENST00000298130 BHMG1C9JSJ3 638 aaPredicted RBP26.39■■□□□ 1.81
SPTSSA-201ENST00000298130 PPP2R2AP63151 447 aa26.39■■□□□ 1.81
SPTSSA-201ENST00000298130 SF3B2Q13435 895 aaKnown RBP26.39■■□□□ 1.81
SPTSSA-201ENST00000298130 MESDQ14696 234 aa26.39■■□□□ 1.81
SPTSSA-201ENST00000298130 CEP55Q53EZ4 464 aa26.39■■□□□ 1.81
SPTSSA-201ENST00000298130 ZDHHC14Q8IZN3 488 aa26.39■■□□□ 1.81
SPTSSA-201ENST00000298130 RAPGEF5Q92565 580 aa26.39■■□□□ 1.81
SPTSSA-201ENST00000298130 GLIS2Q9BZE0 524 aaPredicted RBP26.39■■□□□ 1.81
SPTSSA-201ENST00000298130 TCRBV7S2A1N4TA0A589 114 aa26.38■■□□□ 1.81
SPTSSA-201ENST00000298130 ARHGEF35A5YM69 484 aa26.38■■□□□ 1.81
SPTSSA-201ENST00000298130 A6NNZ2 444 aa26.38■■□□□ 1.81
SPTSSA-201ENST00000298130 TUBB8Q3ZCM7 444 aa26.38■■□□□ 1.81
SPTSSA-201ENST00000298130 MMS22LQ6ZRQ5 1243 aa26.38■■□□□ 1.81
SPTSSA-201ENST00000298130 MIGA2Q7L4E1 593 aa26.38■■□□□ 1.81
SPTSSA-201ENST00000298130 FBXO25Q8TCJ0 367 aa26.38■■□□□ 1.81
SPTSSA-201ENST00000298130 FAM84AQ96KN4 292 aa26.38■■□□□ 1.81
SPTSSA-201ENST00000298130 DDX20Q9UHI6 824 aaKnown RBP26.38■■□□□ 1.81
SPTSSA-201ENST00000298130 INTUQ9ULD6 942 aa26.38■■□□□ 1.81
SPTSSA-201ENST00000298130 GMNCA6NCL1 334 aa26.38■■□□□ 1.81
SPTSSA-201ENST00000298130 CALCAP01258 141 aa26.38■■□□□ 1.81
SPTSSA-201ENST00000298130 EMC10Q5UCC4 262 aa26.38■■□□□ 1.81
SPTSSA-201ENST00000298130 STRIP1Q5VSL9 837 aa26.38■■□□□ 1.81
SPTSSA-201ENST00000298130 SLC5A5Q92911 643 aa26.38■■□□□ 1.81
SPTSSA-201ENST00000298130 AGPAT1Q99943 283 aa26.38■■□□□ 1.81
SPTSSA-201ENST00000298130 PTPN22Q9Y2R2 807 aa26.38■■□□□ 1.81
SPTSSA-201ENST00000298130 DAAM1Q9Y4D1 1078 aa26.38■■□□□ 1.81
SPTSSA-201ENST00000298130 C10orf71Q711Q0 1435 aa26.38■■□□□ 1.81
SPTSSA-201ENST00000298130 CHRNA5P30532 468 aa26.37■■□□□ 1.81
SPTSSA-201ENST00000298130 RUFY4Q6ZNE9 571 aa26.37■■□□□ 1.81
SPTSSA-201ENST00000298130 RPUSD2Q8IZ73 545 aaKnown RBP26.37■■□□□ 1.81
SPTSSA-201ENST00000298130 DMAC2Q9NW81 257 aa26.37■■□□□ 1.81
SPTSSA-201ENST00000298130 SLCO1A2P46721 670 aa26.37■■□□□ 1.81
SPTSSA-201ENST00000298130 FNTAP49354 379 aa26.37■■□□□ 1.81
SPTSSA-201ENST00000298130 NPEPPSP55786 919 aa26.37■■□□□ 1.81
SPTSSA-201ENST00000298130 LMO3Q8TAP4 145 aa26.37■■□□□ 1.81
SPTSSA-201ENST00000298130 NACC1Q96RE7 527 aa26.37■■□□□ 1.81
SPTSSA-201ENST00000298130 FRMPD4Q14CM0 1322 aa26.37■■□□□ 1.81
SPTSSA-201ENST00000298130 PTENP60484 403 aa26.36■■□□□ 1.81
SPTSSA-201ENST00000298130 PPP2R5CQ13362 524 aa26.36■■□□□ 1.81
SPTSSA-201ENST00000298130 GRIPAP1Q4V328 841 aa26.36■■□□□ 1.81
SPTSSA-201ENST00000298130 ARFGAP2Q8N6H7 521 aa26.36■■□□□ 1.81
SPTSSA-201ENST00000298130 NCANO14594 1321 aa26.36■■□□□ 1.81
SPTSSA-201ENST00000298130 THSD7AQ9UPZ6 1657 aa26.36■■□□□ 1.81
SPTSSA-201ENST00000298130 IPO5O00410 1097 aaKnown RBP26.36■■□□□ 1.81
SPTSSA-201ENST00000298130 MAPK7Q13164 816 aa26.36■■□□□ 1.81
SPTSSA-201ENST00000298130 JAMLQ86YT9 394 aa26.36■■□□□ 1.81
SPTSSA-201ENST00000298130 MASTLQ96GX5 879 aa26.36■■□□□ 1.81
SPTSSA-201ENST00000298130 GPRC5CQ9NQ84 441 aa26.36■■□□□ 1.81
SPTSSA-201ENST00000298130 FAM114A2Q9NRY5 505 aa26.36■■□□□ 1.81
SPTSSA-201ENST00000298130 SCN9AQ15858 1988 aa26.36■■□□□ 1.81
SPTSSA-201ENST00000298130 KCNJ1P48048 391 aa26.35■■□□□ 1.81
SPTSSA-201ENST00000298130 MNAT1P51948 309 aa26.35■■□□□ 1.81
SPTSSA-201ENST00000298130 BTNL9Q6UXG8 535 aa26.35■■□□□ 1.81
SPTSSA-201ENST00000298130 NSMFQ6X4W1 530 aa26.35■■□□□ 1.81
SPTSSA-201ENST00000298130 PLEKHO2Q8TD55 490 aa26.35■■□□□ 1.81
SPTSSA-201ENST00000298130 PCDHB18PQ96TA0 734 aa26.35■■□□□ 1.81
SPTSSA-201ENST00000298130 ERP44Q9BS26 406 aa26.35■■□□□ 1.81
SPTSSA-201ENST00000298130 ANKRD62A6NC57 917 aa26.35■■□□□ 1.81
SPTSSA-201ENST00000298130 PIK3CDO00329 1044 aa26.35■■□□□ 1.81
SPTSSA-201ENST00000298130 SGPL1O95470 568 aa26.35■■□□□ 1.81
SPTSSA-201ENST00000298130 PADI6Q6TGC4 694 aa26.35■■□□□ 1.81
SPTSSA-201ENST00000298130 EPB41L4BQ9H329 900 aa26.35■■□□□ 1.81
SPTSSA-201ENST00000298130 LRRC37AA6NMS7 1700 aa26.35■■□□□ 1.81
SPTSSA-201ENST00000298130 TRAPPC3O43617 180 aa26.35■■□□□ 1.81
SPTSSA-201ENST00000298130 IBSPP21815 317 aaPredicted RBP26.35■■□□□ 1.81
SPTSSA-201ENST00000298130 MTMR3Q13615 1198 aa26.35■■□□□ 1.81
SPTSSA-201ENST00000298130 SLC15A2Q16348 729 aa26.35■■□□□ 1.81
SPTSSA-201ENST00000298130 TTC27Q6P3X3 843 aa26.35■■□□□ 1.81
SPTSSA-201ENST00000298130 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP26.35■■□□□ 1.81
SPTSSA-201ENST00000298130 SELENOSQ9BQE4 189 aa26.35■■□□□ 1.81
SPTSSA-201ENST00000298130 WDR11Q9BZH6 1224 aa26.35■■□□□ 1.81
SPTSSA-201ENST00000298130 ANKRD31Q8N7Z5 1873 aa26.34■■□□□ 1.81
SPTSSA-201ENST00000298130 DUPD1Q68J44 220 aa26.34■■□□□ 1.81
SPTSSA-201ENST00000298130 PHLDB2Q86SQ0 1253 aa26.34■■□□□ 1.81
SPTSSA-201ENST00000298130 IL31RAQ8NI17 732 aa26.34■■□□□ 1.81
SPTSSA-201ENST00000298130 RNF25Q96BH1 459 aaPredicted RBP26.34■■□□□ 1.81
SPTSSA-201ENST00000298130 POP1Q99575 1024 aaKnown RBP26.34■■□□□ 1.81
SPTSSA-201ENST00000298130 ZDHHC18Q9NUE0 388 aa26.34■■□□□ 1.81
SPTSSA-201ENST00000298130 VCAM1P19320 739 aa26.34■■□□□ 1.81
SPTSSA-201ENST00000298130 FGFR4P22455 802 aa26.34■■□□□ 1.81
SPTSSA-201ENST00000298130 ANXA13P27216 316 aa26.34■■□□□ 1.81
SPTSSA-201ENST00000298130 ZNF131P52739 623 aa26.34■■□□□ 1.81
SPTSSA-201ENST00000298130 SEC14L1Q92503 715 aa26.34■■□□□ 1.81
SPTSSA-201ENST00000298130 AGBL1Q96MI9 1066 aa26.34■■□□□ 1.81
SPTSSA-201ENST00000298130 MKNK1Q9BUB5 465 aa26.34■■□□□ 1.81
SPTSSA-201ENST00000298130 ANKRD63C9JTQ0 380 aa26.33■■□□□ 1.81
SPTSSA-201ENST00000298130 ITGB5P18084 799 aa26.33■■□□□ 1.81
SPTSSA-201ENST00000298130 COMTP21964 271 aa26.33■■□□□ 1.81
SPTSSA-201ENST00000298130 IFI35P80217 286 aaPredicted RBP26.33■■□□□ 1.81
SPTSSA-201ENST00000298130 BIRC3Q13489 604 aa26.33■■□□□ 1.81
SPTSSA-201ENST00000298130 SLC27A3Q5K4L6 730 aa26.33■■□□□ 1.81
SPTSSA-201ENST00000298130 MCTP2Q6DN12 878 aa26.33■■□□□ 1.81
SPTSSA-201ENST00000298130 EIF1ADQ8N9N8 165 aaKnown RBP26.33■■□□□ 1.81
SPTSSA-201ENST00000298130 PSMD1Q99460 953 aa26.33■■□□□ 1.81
SPTSSA-201ENST00000298130 CARD9Q9H257 536 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms