RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 FSD2A1L4K1 749 aa18.25■□□□□ 0.51
NPM1-201ENST00000296930 PI4K2BG5E9Z4 385 aa18.25■□□□□ 0.51
NPM1-201ENST00000296930 PPM1AP35813 382 aa18.25■□□□□ 0.51
NPM1-201ENST00000296930 NRIP1P48552 1158 aa18.25■□□□□ 0.51
NPM1-201ENST00000296930 PLCB3Q01970 1234 aa18.25■□□□□ 0.51
NPM1-201ENST00000296930 SMAD4Q13485 552 aaKnown RBP18.25■□□□□ 0.51
NPM1-201ENST00000296930 CLUL1Q15846 466 aa18.25■□□□□ 0.51
NPM1-201ENST00000296930 MCTP1Q6DN14 999 aa18.25■□□□□ 0.51
NPM1-201ENST00000296930 KCNT2Q6UVM3 1135 aa18.25■□□□□ 0.51
NPM1-201ENST00000296930 RSPH1Q8WYR4 309 aa18.25■□□□□ 0.51
NPM1-201ENST00000296930 NLRP4Q96MN2 994 aa18.25■□□□□ 0.51
NPM1-201ENST00000296930 ZNF558Q96NG5 402 aa18.25■□□□□ 0.51
NPM1-201ENST00000296930 DHX33Q9H6R0 707 aaKnown RBP18.25■□□□□ 0.51
NPM1-201ENST00000296930 ZSWIM4Q9H7M6 989 aa18.25■□□□□ 0.51
NPM1-201ENST00000296930 TLE6Q9H808 572 aa18.25■□□□□ 0.51
NPM1-201ENST00000296930 PUF60Q9UHX1 559 aaKnown RBP18.25■□□□□ 0.51
NPM1-201ENST00000296930 C5orf42Q9H799 3197 aa18.25■□□□□ 0.51
NPM1-201ENST00000296930 BTBD18B2RXH4 712 aa18.25■□□□□ 0.51
NPM1-201ENST00000296930 MBTPS2O43462 519 aa18.25■□□□□ 0.51
NPM1-201ENST00000296930 GAS2O43903 313 aaKnown RBP18.25■□□□□ 0.51
NPM1-201ENST00000296930 SKIP12755 728 aa18.25■□□□□ 0.51
NPM1-201ENST00000296930 YWHABP31946 246 aaKnown RBP18.25■□□□□ 0.51
NPM1-201ENST00000296930 ZP2Q05996 745 aa18.25■□□□□ 0.51
NPM1-201ENST00000296930 SMAD2Q15796 467 aaKnown RBP18.25■□□□□ 0.51
NPM1-201ENST00000296930 FOXD4L6Q3SYB3 417 aaPredicted RBP18.25■□□□□ 0.51
NPM1-201ENST00000296930 CLLU1OSQ5K130 101 aa18.25■□□□□ 0.51
NPM1-201ENST00000296930 TWF2Q6IBS0 349 aaKnown RBP18.25■□□□□ 0.51
NPM1-201ENST00000296930 FOXD4L3Q6VB84 417 aaPredicted RBP18.25■□□□□ 0.51
NPM1-201ENST00000296930 CATSPER4Q7RTX7 472 aa18.25■□□□□ 0.51
NPM1-201ENST00000296930 RBM23Q86U06 439 aaKnown RBP18.25■□□□□ 0.51
NPM1-201ENST00000296930 KSR1Q8IVT5 923 aa18.25■□□□□ 0.51
NPM1-201ENST00000296930 ADHFE1Q8IWW8 467 aa18.25■□□□□ 0.51
NPM1-201ENST00000296930 DIS3L2Q8IYB7 885 aaKnown RBP18.25■□□□□ 0.51
NPM1-201ENST00000296930 MRPS27Q92552 414 aaKnown RBP18.25■□□□□ 0.51
NPM1-201ENST00000296930 DYDC2Q96IM9 177 aa18.25■□□□□ 0.51
NPM1-201ENST00000296930 MRPL9Q9BYD2 267 aaKnown RBP18.25■□□□□ 0.51
NPM1-201ENST00000296930 ZSCAN16Q9H4T2 348 aaPredicted RBP18.25■□□□□ 0.51
NPM1-201ENST00000296930 RGL1Q9NZL6 768 aa18.25■□□□□ 0.51
NPM1-201ENST00000296930 PCDHA12Q9UN75 941 aa18.25■□□□□ 0.51
NPM1-201ENST00000296930 COL4A3BPQ9Y5P4 624 aa18.25■□□□□ 0.51
NPM1-201ENST00000296930 ATF7P17544 494 aaPredicted RBP18.24■□□□□ 0.51
NPM1-201ENST00000296930 PHKA2P46019 1235 aa18.24■□□□□ 0.51
NPM1-201ENST00000296930 CALCRLQ16602 461 aa18.24■□□□□ 0.51
NPM1-201ENST00000296930 FAM173BQ6P4H8 233 aa18.24■□□□□ 0.51
NPM1-201ENST00000296930 ZNF579Q8NAF0 562 aaKnown RBP18.24■□□□□ 0.51
NPM1-201ENST00000296930 HELQQ8TDG4 1101 aa18.24■□□□□ 0.51
NPM1-201ENST00000296930 PSPC1Q8WXF1 523 aaKnown RBP18.24■□□□□ 0.51
NPM1-201ENST00000296930 MSLNLQ96KJ4 702 aa18.24■□□□□ 0.51
NPM1-201ENST00000296930 GBP4Q96PP9 640 aa18.24■□□□□ 0.51
NPM1-201ENST00000296930 CDCA3Q99618 268 aaPredicted RBP18.24■□□□□ 0.51
NPM1-201ENST00000296930 IFT122Q9HBG6 1241 aa18.24■□□□□ 0.51
NPM1-201ENST00000296930 PIN4Q9Y237 131 aaKnown RBP18.24■□□□□ 0.51
NPM1-201ENST00000296930 PCDHGC5Q9Y5F6 944 aa18.24■□□□□ 0.51
NPM1-201ENST00000296930 ATP6V1DQ9Y5K8 247 aa18.24■□□□□ 0.51
NPM1-201ENST00000296930 FSCN2O14926 492 aa18.23■□□□□ 0.51
NPM1-201ENST00000296930 ERVFC1P60507 584 aa18.23■□□□□ 0.51
NPM1-201ENST00000296930 CYP4A11Q02928 519 aa18.23■□□□□ 0.51
NPM1-201ENST00000296930 KRT17Q04695 432 aa18.23■□□□□ 0.51
NPM1-201ENST00000296930 CTTNQ14247 550 aaKnown RBP18.23■□□□□ 0.51
NPM1-201ENST00000296930 XKR9Q5GH70 373 aa18.23■□□□□ 0.51
NPM1-201ENST00000296930 TMEM31Q5JXX7 168 aa18.23■□□□□ 0.51
NPM1-201ENST00000296930 TCP11Q8WWU5 503 aa18.23■□□□□ 0.51
NPM1-201ENST00000296930 POP1Q99575 1024 aaKnown RBP18.23■□□□□ 0.51
NPM1-201ENST00000296930 SPG21Q9NZD8 308 aa18.23■□□□□ 0.51
NPM1-201ENST00000296930 NEMFO60524 1076 aa18.22■□□□□ 0.51
NPM1-201ENST00000296930 EYA4O95677 639 aa18.22■□□□□ 0.51
NPM1-201ENST00000296930 RAB27AP51159 221 aa18.22■□□□□ 0.51
NPM1-201ENST00000296930 NFKBIBQ15653 356 aa18.22■□□□□ 0.51
NPM1-201ENST00000296930 SRGAP1Q7Z6B7 1085 aa18.22■□□□□ 0.51
NPM1-201ENST00000296930 TPH2Q8IWU9 490 aa18.22■□□□□ 0.51
NPM1-201ENST00000296930 PRPF31Q8WWY3 499 aaKnown RBP18.22■□□□□ 0.51
NPM1-201ENST00000296930 TMEM143Q96AN5 459 aa18.22■□□□□ 0.51
NPM1-201ENST00000296930 CLEC1BQ9P126 229 aa18.22■□□□□ 0.51
NPM1-201ENST00000296930 C19orf67A6NJJ6 358 aa18.22■□□□□ 0.51
NPM1-201ENST00000296930 ASAP2O43150 1006 aa18.22■□□□□ 0.51
NPM1-201ENST00000296930 GPR37L1O60883 481 aa18.22■□□□□ 0.51
NPM1-201ENST00000296930 ZNF623O75123 536 aa18.22■□□□□ 0.51
NPM1-201ENST00000296930 SLITRK3O94933 977 aa18.22■□□□□ 0.51
NPM1-201ENST00000296930 ALADP13716 330 aa18.22■□□□□ 0.51
NPM1-201ENST00000296930 U2AF2P26368 475 aaKnown RBP eCLIP18.22■□□□□ 0.516e-8■□□□□ 10.4
NPM1-201ENST00000296930 COASYQ13057 564 aa18.22■□□□□ 0.51
NPM1-201ENST00000296930 EMC2Q15006 297 aa18.22■□□□□ 0.51
NPM1-201ENST00000296930 EIF2AK1Q9BQI3 630 aaKnown RBP18.22■□□□□ 0.51
NPM1-201ENST00000296930 LRFN3Q9BTN0 628 aa18.22■□□□□ 0.51
NPM1-201ENST00000296930 TTC12Q9H892 705 aaPredicted RBP18.22■□□□□ 0.51
NPM1-201ENST00000296930 NGRNQ9NPE2 291 aaKnown RBP18.22■□□□□ 0.51
NPM1-201ENST00000296930 AGPAT5Q9NUQ2 364 aa18.22■□□□□ 0.51
NPM1-201ENST00000296930 FAM105AQ9NUU6 356 aa18.22■□□□□ 0.51
NPM1-201ENST00000296930 PER2O15055 1255 aa18.21■□□□□ 0.51
NPM1-201ENST00000296930 GLP2RO95838 553 aa18.21■□□□□ 0.51
NPM1-201ENST00000296930 SRGAP2CP0DJJ0 459 aa18.21■□□□□ 0.51
NPM1-201ENST00000296930 PBX3P40426 434 aa18.21■□□□□ 0.51
NPM1-201ENST00000296930 CACNB1Q02641 598 aaPredicted RBP18.21■□□□□ 0.51
NPM1-201ENST00000296930 DNM1Q05193 864 aaKnown RBP18.21■□□□□ 0.51
NPM1-201ENST00000296930 LAMTOR4Q0VGL1 99 aa18.21■□□□□ 0.51
NPM1-201ENST00000296930 SAFBQ15424 915 aaKnown RBP eCLIP18.21■□□□□ 0.51
NPM1-201ENST00000296930 DUSP6Q16828 381 aa18.21■□□□□ 0.51
NPM1-201ENST00000296930 SMRP1Q8NCR6 262 aa18.21■□□□□ 0.51
NPM1-201ENST00000296930 MTRQ99707 1265 aa18.21■□□□□ 0.51
NPM1-201ENST00000296930 HSD17B14Q9BPX1 270 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms