RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 INO80B-WBP1J3KQ70 363 aa13.38□□□□□ -0.27
HMGB2-201ENST00000296503 DGKIO75912 1065 aa13.38□□□□□ -0.27
HMGB2-201ENST00000296503 F13A1P00488 732 aa13.38□□□□□ -0.27
HMGB2-201ENST00000296503 IGFBP4P22692 258 aa13.38□□□□□ -0.27
HMGB2-201ENST00000296503 PTENP60484 403 aa13.38□□□□□ -0.27
HMGB2-201ENST00000296503 POU5F1BQ06416 359 aa13.38□□□□□ -0.27
HMGB2-201ENST00000296503 NCBP1Q09161 790 aaKnown RBP13.38□□□□□ -0.27
HMGB2-201ENST00000296503 GRB10Q13322 594 aa13.38□□□□□ -0.27
HMGB2-201ENST00000296503 CAPSQ13938 189 aa13.38□□□□□ -0.27
HMGB2-201ENST00000296503 BTG3Q14201 252 aaPredicted RBP13.38□□□□□ -0.27
HMGB2-201ENST00000296503 SLC39A14Q15043 492 aa13.38□□□□□ -0.27
HMGB2-201ENST00000296503 STK38Q15208 465 aa13.38□□□□□ -0.27
HMGB2-201ENST00000296503 SPECC1Q5M775 1068 aa13.38□□□□□ -0.27
HMGB2-201ENST00000296503 HYIQ5T013 277 aa13.38□□□□□ -0.27
HMGB2-201ENST00000296503 TWF2Q6IBS0 349 aaKnown RBP13.38□□□□□ -0.27
HMGB2-201ENST00000296503 KCNK18Q7Z418 384 aa13.38□□□□□ -0.27
HMGB2-201ENST00000296503 KCTD17Q8N5Z5 321 aa13.38□□□□□ -0.27
HMGB2-201ENST00000296503 CSRNP2Q9H175 543 aa13.38□□□□□ -0.27
HMGB2-201ENST00000296503 MINDY3Q9H8M7 445 aa13.38□□□□□ -0.27
HMGB2-201ENST00000296503 RFXAPO00287 272 aa13.38□□□□□ -0.27
HMGB2-201ENST00000296503 ERLIN2O94905 339 aa13.38□□□□□ -0.27
HMGB2-201ENST00000296503 FOSL2P15408 326 aa13.38□□□□□ -0.27
HMGB2-201ENST00000296503 FAM189BP81408 668 aa13.38□□□□□ -0.27
HMGB2-201ENST00000296503 PAN2Q504Q3 1202 aaKnown RBP13.38□□□□□ -0.27
HMGB2-201ENST00000296503 SPRED2Q7Z698 418 aa13.38□□□□□ -0.27
HMGB2-201ENST00000296503 RNF169Q8NCN4 708 aa13.38□□□□□ -0.27
HMGB2-201ENST00000296503 SP7Q8TDD2 431 aaPredicted RBP13.38□□□□□ -0.27
HMGB2-201ENST00000296503 CLIC6Q96NY7 704 aa13.38□□□□□ -0.27
HMGB2-201ENST00000296503 TMEM161AQ9NX61 479 aa13.38□□□□□ -0.27
HMGB2-201ENST00000296503 STXBP5LQ9Y2K9 1186 aa13.38□□□□□ -0.27
HMGB2-201ENST00000296503 SLC26A4O43511 780 aa13.37□□□□□ -0.27
HMGB2-201ENST00000296503 NASPP49321 788 aaPredicted RBP13.37□□□□□ -0.27
HMGB2-201ENST00000296503 ERVK-21P61565 698 aa13.37□□□□□ -0.27
HMGB2-201ENST00000296503 PKP1Q13835 747 aa13.37□□□□□ -0.27
HMGB2-201ENST00000296503 DHX8Q14562 1220 aaKnown RBP13.37□□□□□ -0.27
HMGB2-201ENST00000296503 RINT1Q6NUQ1 792 aa13.37□□□□□ -0.27
HMGB2-201ENST00000296503 CRIPAKQ8N1N5 446 aa13.37□□□□□ -0.27
HMGB2-201ENST00000296503 KIFAP3Q92845 792 aa13.37□□□□□ -0.27
HMGB2-201ENST00000296503 ZNF689Q96CS4 500 aaPredicted RBP13.37□□□□□ -0.27
HMGB2-201ENST00000296503 PDLIM2Q96JY6 352 aa13.37□□□□□ -0.27
HMGB2-201ENST00000296503 IFT74Q96LB3 600 aa13.37□□□□□ -0.27
HMGB2-201ENST00000296503 C17orf80Q9BSJ5 609 aa13.37□□□□□ -0.27
HMGB2-201ENST00000296503 ELAC1Q9H777 363 aaKnown RBP13.37□□□□□ -0.27
HMGB2-201ENST00000296503 FBXO2Q9UK22 296 aaPredicted RBP13.37□□□□□ -0.27
HMGB2-201ENST00000296503 A0A0U1RQF3 1178 aa13.36□□□□□ -0.27
HMGB2-201ENST00000296503 PLA2G4BP0C869 781 aa13.36□□□□□ -0.27
HMGB2-201ENST00000296503 GATMP50440 423 aa13.36□□□□□ -0.27
HMGB2-201ENST00000296503 KARSQ15046 597 aaKnown RBP13.36□□□□□ -0.27
HMGB2-201ENST00000296503 PPP2R5AQ15172 486 aa13.36□□□□□ -0.27
HMGB2-201ENST00000296503 CSPP1Q1MSJ5 1256 aa13.36□□□□□ -0.27
HMGB2-201ENST00000296503 ECHDC2Q86YB7 292 aa13.36□□□□□ -0.27
HMGB2-201ENST00000296503 ZBTB8OSQ8IWT0 167 aa13.36□□□□□ -0.27
HMGB2-201ENST00000296503 SYT2Q8N9I0 419 aaPredicted RBP13.36□□□□□ -0.27
HMGB2-201ENST00000296503 EPSTI1Q96J88 318 aa13.36□□□□□ -0.27
HMGB2-201ENST00000296503 CCDC39Q9UFE4 941 aa13.36□□□□□ -0.27
HMGB2-201ENST00000296503 TBKBP1A7MCY6 615 aa13.36□□□□□ -0.27
HMGB2-201ENST00000296503 SPTLC2O15270 562 aa13.36□□□□□ -0.27
HMGB2-201ENST00000296503 EOMESO95936 686 aa13.36□□□□□ -0.27
HMGB2-201ENST00000296503 MSNP26038 577 aaKnown RBP13.36□□□□□ -0.27
HMGB2-201ENST00000296503 RAD51AP2Q09MP3 1159 aa13.36□□□□□ -0.27
HMGB2-201ENST00000296503 PCBP1Q15365 356 aaKnown RBP eCLIP13.36□□□□□ -0.27
HMGB2-201ENST00000296503 TMEM119Q4V9L6 283 aa13.36□□□□□ -0.27
HMGB2-201ENST00000296503 IFNLR1Q8IU57 520 aaPredicted RBP13.36□□□□□ -0.27
HMGB2-201ENST00000296503 TMEM192Q8IY95 271 aa13.36□□□□□ -0.27
HMGB2-201ENST00000296503 KRI1Q8N9T8 703 aaKnown RBP13.36□□□□□ -0.27
HMGB2-201ENST00000296503 LINC00301Q8NCQ3 95 aa13.36□□□□□ -0.27
HMGB2-201ENST00000296503 DEPTORQ8TB45 409 aa13.36□□□□□ -0.27
HMGB2-201ENST00000296503 SAMD11Q96NU1 681 aa13.36□□□□□ -0.27
HMGB2-201ENST00000296503 RUSC1Q9BVN2 902 aa13.36□□□□□ -0.27
HMGB2-201ENST00000296503 CCSER1Q9C0I3 900 aa13.36□□□□□ -0.27
HMGB2-201ENST00000296503 AGPAT5Q9NUQ2 364 aa13.36□□□□□ -0.27
HMGB2-201ENST00000296503 ADGRA3Q8IWK6 1321 aa13.36□□□□□ -0.27
HMGB2-201ENST00000296503 EPOPA6NHQ4 379 aa13.35□□□□□ -0.27
HMGB2-201ENST00000296503 HOXA2O43364 376 aa13.35□□□□□ -0.27
HMGB2-201ENST00000296503 HIP1RO75146 1068 aa13.35□□□□□ -0.27
HMGB2-201ENST00000296503 FGFR1P11362 822 aa13.35□□□□□ -0.27
HMGB2-201ENST00000296503 SKIP12755 728 aa13.35□□□□□ -0.27
HMGB2-201ENST00000296503 LIG1P18858 919 aa13.35□□□□□ -0.27
HMGB2-201ENST00000296503 PLCG1P19174 1290 aa13.35□□□□□ -0.27
HMGB2-201ENST00000296503 TXLNAP40222 546 aa13.35□□□□□ -0.27
HMGB2-201ENST00000296503 NAMPTP43490 491 aa13.35□□□□□ -0.27
HMGB2-201ENST00000296503 MBTD1Q05BQ5 628 aa13.35□□□□□ -0.27
HMGB2-201ENST00000296503 LONRF3Q496Y0 759 aa13.35□□□□□ -0.27
HMGB2-201ENST00000296503 EPC2Q52LR7 807 aa13.35□□□□□ -0.27
HMGB2-201ENST00000296503 SPOUT1Q5T280 376 aaKnown RBP13.35□□□□□ -0.27
HMGB2-201ENST00000296503 C1orf186Q6ZWK4 172 aa13.35□□□□□ -0.27
HMGB2-201ENST00000296503 USP49Q70CQ1 688 aa13.35□□□□□ -0.27
HMGB2-201ENST00000296503 CMTR2Q8IYT2 770 aaKnown RBP13.35□□□□□ -0.27
HMGB2-201ENST00000296503 ABI1Q8IZP0 508 aa13.35□□□□□ -0.27
HMGB2-201ENST00000296503 FBXO22Q8NEZ5 403 aa13.35□□□□□ -0.27
HMGB2-201ENST00000296503 BSNDQ8WZ55 320 aa13.35□□□□□ -0.27
HMGB2-201ENST00000296503 SYMPKQ92797 1274 aaKnown RBP13.35□□□□□ -0.27
HMGB2-201ENST00000296503 CPB2Q96IY4 423 aa13.35□□□□□ -0.27
HMGB2-201ENST00000296503 NFKBIZQ9BYH8 718 aa13.35□□□□□ -0.27
HMGB2-201ENST00000296503 C2orf40Q9H1Z8 148 aa13.35□□□□□ -0.27
HMGB2-201ENST00000296503 CCDC169A6NNP5 214 aa13.34□□□□□ -0.27
HMGB2-201ENST00000296503 SFI1A8K8P3 1242 aa13.34□□□□□ -0.27
HMGB2-201ENST00000296503 GTPBP6O43824 516 aaPredicted RBP13.34□□□□□ -0.27
HMGB2-201ENST00000296503 AXLP30530 894 aa13.34□□□□□ -0.27
HMGB2-201ENST00000296503 HOXA11P31270 313 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms