RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 KIAA1217Q5T5P2 1943 aa12.8□□□□□ -0.36
RHO-201ENST00000296271 ATMINO43313 823 aaPredicted RBP12.79□□□□□ -0.36
RHO-201ENST00000296271 PPP1R12BO60237 982 aaPredicted RBP12.79□□□□□ -0.36
RHO-201ENST00000296271 BUB1BO60566 1050 aaPredicted RBP12.79□□□□□ -0.36
RHO-201ENST00000296271 EIF3JO75822 258 aaKnown RBP12.79□□□□□ -0.36
RHO-201ENST00000296271 PTPRAP18433 802 aa12.79□□□□□ -0.36
RHO-201ENST00000296271 BACE1P56817 501 aa12.79□□□□□ -0.36
RHO-201ENST00000296271 MAP2K1Q02750 393 aaPredicted RBP12.79□□□□□ -0.36
RHO-201ENST00000296271 TMEM132BQ14DG7 1078 aa12.79□□□□□ -0.36
RHO-201ENST00000296271 RPS6KA1Q15418 735 aa12.79□□□□□ -0.36
RHO-201ENST00000296271 SKIDA1Q1XH10 827 aa12.79□□□□□ -0.36
RHO-201ENST00000296271 DAAM2Q86T65 1068 aa12.79□□□□□ -0.36
RHO-201ENST00000296271 SLC35G2Q8TBE7 412 aa12.79□□□□□ -0.36
RHO-201ENST00000296271 CASKIN2Q8WXE0 1202 aa12.79□□□□□ -0.36
RHO-201ENST00000296271 CNKSR2Q8WXI2 1034 aa12.79□□□□□ -0.36
RHO-201ENST00000296271 SEMA4DQ92854 862 aa12.79□□□□□ -0.36
RHO-201ENST00000296271 SYT11Q9BT88 431 aa12.79□□□□□ -0.36
RHO-201ENST00000296271 GABBR1Q9UBS5 961 aa12.79□□□□□ -0.36
RHO-201ENST00000296271 PFASO15067 1338 aa12.79□□□□□ -0.36
RHO-201ENST00000296271 GTPBP10A4D1E9 387 aaKnown RBP12.79□□□□□ -0.36
RHO-201ENST00000296271 ZBED4O75132 1171 aa12.79□□□□□ -0.36
RHO-201ENST00000296271 NR3C2P08235 984 aa12.79□□□□□ -0.36
RHO-201ENST00000296271 VAMP7P51809 220 aa12.79□□□□□ -0.36
RHO-201ENST00000296271 TNIP1Q15025 636 aa12.79□□□□□ -0.36
RHO-201ENST00000296271 DDX47Q9H0S4 455 aaKnown RBP12.79□□□□□ -0.36
RHO-201ENST00000296271 RABEP2Q9H5N1 569 aa12.79□□□□□ -0.36
RHO-201ENST00000296271 LUC7LQ9NQ29 371 aaKnown RBP12.79□□□□□ -0.36
RHO-201ENST00000296271 FERP16591 822 aa12.78□□□□□ -0.36
RHO-201ENST00000296271 NPTX2P47972 431 aa12.78□□□□□ -0.36
RHO-201ENST00000296271 ZNF211Q13398 564 aaPredicted RBP12.78□□□□□ -0.36
RHO-201ENST00000296271 LMBRD2Q68DH5 695 aaPredicted RBP12.78□□□□□ -0.36
RHO-201ENST00000296271 SCARA3Q6AZY7 606 aa12.78□□□□□ -0.36
RHO-201ENST00000296271 SWSAP1Q6NVH7 229 aa12.78□□□□□ -0.36
RHO-201ENST00000296271 SLC39A4Q6P5W5 647 aa12.78□□□□□ -0.36
RHO-201ENST00000296271 USP38Q8NB14 1042 aa12.78□□□□□ -0.36
RHO-201ENST00000296271 NLGN2Q8NFZ4 835 aa12.78□□□□□ -0.36
RHO-201ENST00000296271 MKNK1Q9BUB5 465 aa12.78□□□□□ -0.36
RHO-201ENST00000296271 TMEM117Q9H0C3 514 aa12.78□□□□□ -0.36
RHO-201ENST00000296271 ZNF214Q9UL59 606 aaPredicted RBP12.78□□□□□ -0.36
RHO-201ENST00000296271 SGPL1O95470 568 aa12.78□□□□□ -0.36
RHO-201ENST00000296271 SP2Q02086 613 aa12.78□□□□□ -0.36
RHO-201ENST00000296271 TNFAIP1Q13829 316 aa12.78□□□□□ -0.36
RHO-201ENST00000296271 LLGL1Q15334 1064 aa12.78□□□□□ -0.36
RHO-201ENST00000296271 NFIL3Q16649 462 aa12.78□□□□□ -0.36
RHO-201ENST00000296271 HSP90B2PQ58FF3 399 aa12.78□□□□□ -0.36
RHO-201ENST00000296271 DNAJC21Q5F1R6 531 aaKnown RBP12.78□□□□□ -0.36
RHO-201ENST00000296271 TTC19Q6DKK2 380 aaPredicted RBP12.78□□□□□ -0.36
RHO-201ENST00000296271 PEX26Q7Z412 305 aa12.78□□□□□ -0.36
RHO-201ENST00000296271 REPS2Q8NFH8 660 aa12.78□□□□□ -0.36
RHO-201ENST00000296271 DHX38Q92620 1227 aaKnown RBP12.78□□□□□ -0.36
RHO-201ENST00000296271 ACCSQ96QU6 501 aa12.78□□□□□ -0.36
RHO-201ENST00000296271 KCND2Q9NZV8 630 aa12.78□□□□□ -0.36
RHO-201ENST00000296271 DBR1Q9UK59 544 aaKnown RBP12.78□□□□□ -0.36
RHO-201ENST00000296271 FBXL5Q9UKA1 691 aa12.78□□□□□ -0.36
RHO-201ENST00000296271 BZW2Q9Y6E2 419 aaKnown RBP12.78□□□□□ -0.36
RHO-201ENST00000296271 POLR2AP24928 1970 aaKnown RBP12.78□□□□□ -0.36
RHO-201ENST00000296271 HIRAP54198 1017 aaPredicted RBP12.77□□□□□ -0.36
RHO-201ENST00000296271 ITIH3Q06033 890 aa12.77□□□□□ -0.36
RHO-201ENST00000296271 MAP9Q49MG5 647 aa12.77□□□□□ -0.36
RHO-201ENST00000296271 EPC2Q52LR7 807 aa12.77□□□□□ -0.36
RHO-201ENST00000296271 DCAF12L1Q5VU92 463 aa12.77□□□□□ -0.36
RHO-201ENST00000296271 STXBP4Q6ZWJ1 553 aa12.77□□□□□ -0.36
RHO-201ENST00000296271 CYFIP1Q7L576 1253 aa12.77□□□□□ -0.36
RHO-201ENST00000296271 NT5DC3Q86UY8 548 aa12.77□□□□□ -0.36
RHO-201ENST00000296271 VSIG10LQ86VR7 867 aa12.77□□□□□ -0.36
RHO-201ENST00000296271 CCDC60Q8IWA6 550 aaPredicted RBP12.77□□□□□ -0.36
RHO-201ENST00000296271 SCYL3Q8IZE3 742 aa12.77□□□□□ -0.36
RHO-201ENST00000296271 ZNF280CQ8ND82 737 aa12.77□□□□□ -0.36
RHO-201ENST00000296271 ARL8AQ96BM9 186 aa12.77□□□□□ -0.36
RHO-201ENST00000296271 PCDHB18PQ96TA0 734 aa12.77□□□□□ -0.36
RHO-201ENST00000296271 PI4K2AQ9BTU6 479 aa12.77□□□□□ -0.36
RHO-201ENST00000296271 CELF4Q9BZC1 486 aaKnown RBP12.77□□□□□ -0.36
RHO-201ENST00000296271 TBC1D22BQ9NU19 505 aa12.77□□□□□ -0.36
RHO-201ENST00000296271 TCEAL9Q9UHQ7 104 aa12.77□□□□□ -0.36
RHO-201ENST00000296271 RLFQ13129 1914 aa12.77□□□□□ -0.37
RHO-201ENST00000296271 DENND3A2RUS2 1198 aa12.77□□□□□ -0.37
RHO-201ENST00000296271 TMEM110-MUSTN1A8MSY1 372 aa12.77□□□□□ -0.37
RHO-201ENST00000296271 TUBBP07437 444 aa12.77□□□□□ -0.37
RHO-201ENST00000296271 KRT13P13646 458 aa12.77□□□□□ -0.37
RHO-201ENST00000296271 MUTP22033 750 aa12.77□□□□□ -0.37
RHO-201ENST00000296271 MARCKSL1P49006 195 aa12.77□□□□□ -0.37
RHO-201ENST00000296271 WNT7BP56706 349 aa12.77□□□□□ -0.37
RHO-201ENST00000296271 TGFB2P61812 414 aa12.77□□□□□ -0.37
RHO-201ENST00000296271 PSMC5P62195 406 aa12.77□□□□□ -0.37
RHO-201ENST00000296271 GTF2BQ00403 316 aa12.77□□□□□ -0.37
RHO-201ENST00000296271 CNTN2Q02246 1040 aa12.77□□□□□ -0.37
RHO-201ENST00000296271 XXYLT1Q8NBI6 393 aa12.77□□□□□ -0.37
RHO-201ENST00000296271 TMEM161BQ8NDZ6 487 aa12.77□□□□□ -0.37
RHO-201ENST00000296271 FAM71BQ8TC56 605 aa12.77□□□□□ -0.37
RHO-201ENST00000296271 TAF4BQ92750 862 aa12.77□□□□□ -0.37
RHO-201ENST00000296271 BTBD6Q96KE9 485 aa12.77□□□□□ -0.37
RHO-201ENST00000296271 KREMEN1Q96MU8 473 aa12.77□□□□□ -0.37
RHO-201ENST00000296271 NEUROG2Q9H2A3 272 aa12.77□□□□□ -0.37
RHO-201ENST00000296271 STXBP5LQ9Y2K9 1186 aa12.77□□□□□ -0.37
RHO-201ENST00000296271 NOC2LQ9Y3T9 749 aaKnown RBP12.77□□□□□ -0.37
RHO-201ENST00000296271 GOLGA6BA6NDN3 693 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 WDR64B1ANS9 1081 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 STBD1O95210 358 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 CNGA1P29973 690 aa12.76□□□□□ -0.37
RHO-201ENST00000296271 AARSP49588 968 aaKnown RBP eCLIP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms