RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 TAS1R3Q7RTX0 852 aa16.69■□□□□ 0.26
CCDC140-201ENST00000295226 SCFD1Q8WVM8 642 aa16.69■□□□□ 0.26
CCDC140-201ENST00000295226 SPIRE2Q8WWL2 714 aa16.69■□□□□ 0.26
CCDC140-201ENST00000295226 NTPCRQ9BSD7 190 aaKnown RBP16.69■□□□□ 0.26
CCDC140-201ENST00000295226 CDY2AQ9Y6F7 541 aa16.69■□□□□ 0.26
CCDC140-201ENST00000295226 PPP1R3GB7ZBB8 358 aa16.68■□□□□ 0.26
CCDC140-201ENST00000295226 IQCF3P0C7M6 154 aa16.68■□□□□ 0.26
CCDC140-201ENST00000295226 HOXD13P35453 343 aa16.68■□□□□ 0.26
CCDC140-201ENST00000295226 MRPS6P82932 125 aaKnown RBP16.68■□□□□ 0.26
CCDC140-201ENST00000295226 FAAP100Q0VG06 881 aa16.68■□□□□ 0.26
CCDC140-201ENST00000295226 TFDP1Q14186 410 aa16.68■□□□□ 0.26
CCDC140-201ENST00000295226 ZNF618Q5T7W0 954 aa16.68■□□□□ 0.26
CCDC140-201ENST00000295226 C11orf57Q6ZUT1 292 aaPredicted RBP16.68■□□□□ 0.26
CCDC140-201ENST00000295226 ANKRD33Q7Z3H0 272 aa16.68■□□□□ 0.26
CCDC140-201ENST00000295226 NME8Q8N427 588 aa16.68■□□□□ 0.26
CCDC140-201ENST00000295226 TRIML1Q8N9V2 468 aa16.68■□□□□ 0.26
CCDC140-201ENST00000295226 TMEM40Q8WWA1 233 aa16.68■□□□□ 0.26
CCDC140-201ENST00000295226 DNAJC25Q9H1X3 360 aa16.68■□□□□ 0.26
CCDC140-201ENST00000295226 ARHGAP28Q9P2N2 729 aa16.68■□□□□ 0.26
CCDC140-201ENST00000295226 EDN1P05305 212 aa16.67■□□□□ 0.26
CCDC140-201ENST00000295226 MAPTP10636 758 aaKnown RBP16.67■□□□□ 0.26
CCDC140-201ENST00000295226 CKBP12277 381 aa16.67■□□□□ 0.26
CCDC140-201ENST00000295226 PTENP60484 403 aa16.67■□□□□ 0.26
CCDC140-201ENST00000295226 EPM2AIP1Q7L775 607 aaPredicted RBP16.67■□□□□ 0.26
CCDC140-201ENST00000295226 RSPH3Q86UC2 560 aa16.67■□□□□ 0.26
CCDC140-201ENST00000295226 TNS4Q8IZW8 715 aa16.67■□□□□ 0.26
CCDC140-201ENST00000295226 PDLIM2Q96JY6 352 aa16.67■□□□□ 0.26
CCDC140-201ENST00000295226 STRA6Q9BX79 667 aa16.67■□□□□ 0.26
CCDC140-201ENST00000295226 CELF4Q9BZC1 486 aaKnown RBP16.67■□□□□ 0.26
CCDC140-201ENST00000295226 UMODL1Q5DID0 1318 aa16.66■□□□□ 0.26
CCDC140-201ENST00000295226 TTLL13PA6NNM8 815 aa16.66■□□□□ 0.26
CCDC140-201ENST00000295226 DCDC2CA8MYV0 355 aa16.66■□□□□ 0.26
CCDC140-201ENST00000295226 INO80B-WBP1J3KQ70 363 aa16.66■□□□□ 0.26
CCDC140-201ENST00000295226 K7ERI5 159 aa16.66■□□□□ 0.26
CCDC140-201ENST00000295226 PPP1R37O75864 691 aa16.66■□□□□ 0.26
CCDC140-201ENST00000295226 CCDC192P0DO97 292 aa16.66■□□□□ 0.26
CCDC140-201ENST00000295226 STX1AQ16623 288 aa16.66■□□□□ 0.26
CCDC140-201ENST00000295226 ANO6Q4KMQ2 910 aa16.66■□□□□ 0.26
CCDC140-201ENST00000295226 C1orf53Q5VUE5 145 aa16.66■□□□□ 0.26
CCDC140-201ENST00000295226 CDCA2Q69YH5 1023 aaPredicted RBP16.66■□□□□ 0.26
CCDC140-201ENST00000295226 MYOCDQ8IZQ8 938 aa16.66■□□□□ 0.26
CCDC140-201ENST00000295226 SEZ6LQ9BYH1 1024 aa16.66■□□□□ 0.26
CCDC140-201ENST00000295226 INO80BQ9C086 356 aaPredicted RBP16.66■□□□□ 0.26
CCDC140-201ENST00000295226 TBX20Q9UMR3 447 aa16.66■□□□□ 0.26
CCDC140-201ENST00000295226 MROH7Q68CQ1 1323 aa16.66■□□□□ 0.26
CCDC140-201ENST00000295226 TISP43B9A030 160 aa16.65■□□□□ 0.26
CCDC140-201ENST00000295226 TLR3O15455 904 aaKnown RBP16.65■□□□□ 0.26
CCDC140-201ENST00000295226 PHKA2P46019 1235 aa16.65■□□□□ 0.26
CCDC140-201ENST00000295226 STX17P56962 302 aa16.65■□□□□ 0.26
CCDC140-201ENST00000295226 GTF2BQ00403 316 aa16.65■□□□□ 0.26
CCDC140-201ENST00000295226 MBTD1Q05BQ5 628 aa16.65■□□□□ 0.26
CCDC140-201ENST00000295226 MGAT3Q09327 533 aa16.65■□□□□ 0.26
CCDC140-201ENST00000295226 RPAINQ86UA6 219 aa16.65■□□□□ 0.26
CCDC140-201ENST00000295226 ZBTB8OSQ8IWT0 167 aa16.65■□□□□ 0.26
CCDC140-201ENST00000295226 ADSSL1Q8N142 457 aa16.65■□□□□ 0.26
CCDC140-201ENST00000295226 ZNF507Q8TCN5 953 aa16.65■□□□□ 0.26
CCDC140-201ENST00000295226 ANO10Q9NW15 660 aa16.65■□□□□ 0.26
CCDC140-201ENST00000295226 CTNND2Q9UQB3 1225 aa16.65■□□□□ 0.26
CCDC140-201ENST00000295226 PCDHB13Q9Y5F0 798 aa16.65■□□□□ 0.26
CCDC140-201ENST00000295226 TRPV2Q9Y5S1 764 aa16.65■□□□□ 0.26
CCDC140-201ENST00000295226 M0QZ92 97 aa16.65■□□□□ 0.26
CCDC140-201ENST00000295226 B4GALT5O43286 388 aa16.65■□□□□ 0.26
CCDC140-201ENST00000295226 CAPN2P17655 700 aa16.65■□□□□ 0.26
CCDC140-201ENST00000295226 CRYBB1P53674 252 aaPredicted RBP16.65■□□□□ 0.26
CCDC140-201ENST00000295226 PMS1P54277 932 aaKnown RBP16.65■□□□□ 0.26
CCDC140-201ENST00000295226 TRAF7Q6Q0C0 670 aa16.65■□□□□ 0.26
CCDC140-201ENST00000295226 ZNF410Q86VK4 478 aa16.65■□□□□ 0.26
CCDC140-201ENST00000295226 MLKLQ8NB16 471 aa16.65■□□□□ 0.26
CCDC140-201ENST00000295226 TOX2Q96NM4 488 aa16.65■□□□□ 0.26
CCDC140-201ENST00000295226 GCOM2Q9BZD3 368 aaPredicted RBP16.65■□□□□ 0.26
CCDC140-201ENST00000295226 PPP1R12CQ9BZL4 782 aa16.65■□□□□ 0.26
CCDC140-201ENST00000295226 CCDC113Q9H0I3 377 aa16.65■□□□□ 0.26
CCDC140-201ENST00000295226 SEMA6BQ9H3T3 888 aa16.65■□□□□ 0.26
CCDC140-201ENST00000295226 ST6GALNAC4Q9H4F1 302 aa16.65■□□□□ 0.26
CCDC140-201ENST00000295226 TRIM49BA6NDI0 452 aa16.64■□□□□ 0.25
CCDC140-201ENST00000295226 DARSP14868 501 aaKnown RBP16.64■□□□□ 0.25
CCDC140-201ENST00000295226 GUF1Q8N442 669 aaKnown RBP16.64■□□□□ 0.25
CCDC140-201ENST00000295226 NELFBQ8WX92 580 aa16.64■□□□□ 0.25
CCDC140-201ENST00000295226 MED15Q96RN5 788 aa16.64■□□□□ 0.25
CCDC140-201ENST00000295226 TMEM39AQ9NV64 488 aa16.64■□□□□ 0.25
CCDC140-201ENST00000295226 NOC2LQ9Y3T9 749 aaKnown RBP16.64■□□□□ 0.25
CCDC140-201ENST00000295226 ANKRD63C9JTQ0 380 aa16.63■□□□□ 0.25
CCDC140-201ENST00000295226 EIF3DO15371 548 aaKnown RBP eCLIP16.63■□□□□ 0.25
CCDC140-201ENST00000295226 PRKCBP05771 671 aa16.63■□□□□ 0.25
CCDC140-201ENST00000295226 GHRP10912 638 aa16.63■□□□□ 0.25
CCDC140-201ENST00000295226 EIF4BP23588 611 aaKnown RBP16.63■□□□□ 0.25
CCDC140-201ENST00000295226 CYP2C18P33260 490 aa16.63■□□□□ 0.25
CCDC140-201ENST00000295226 EFNA5P52803 228 aa16.63■□□□□ 0.25
CCDC140-201ENST00000295226 CCL23P55773 120 aa16.63■□□□□ 0.25
CCDC140-201ENST00000295226 CDC42EP1Q00587 391 aa16.63■□□□□ 0.25
CCDC140-201ENST00000295226 POU5F1BQ06416 359 aa16.63■□□□□ 0.25
CCDC140-201ENST00000295226 MBTPS1Q14703 1052 aa16.63■□□□□ 0.25
CCDC140-201ENST00000295226 MAPK6Q16659 721 aa16.63■□□□□ 0.25
CCDC140-201ENST00000295226 CDR2LQ86X02 465 aaPredicted RBP16.63■□□□□ 0.25
CCDC140-201ENST00000295226 SYCP3Q8IZU3 236 aa16.63■□□□□ 0.25
CCDC140-201ENST00000295226 EEF2KMTQ96G04 330 aa16.63■□□□□ 0.25
CCDC140-201ENST00000295226 ACCSQ96QU6 501 aa16.63■□□□□ 0.25
CCDC140-201ENST00000295226 NOC4LQ9BVI4 516 aaKnown RBP16.63■□□□□ 0.25
CCDC140-201ENST00000295226 TARS2Q9BW92 718 aaKnown RBP16.63■□□□□ 0.25
CCDC140-201ENST00000295226 C2orf40Q9H1Z8 148 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms