RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 BRD8Q9H0E9 1235 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 C19orf44Q9H6X5 657 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 TSC22D2O75157 780 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 APOA1P02647 267 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 ERVK-10P10266 1014 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 CLUP10909 449 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.2□□□□□ -0.3
SLX4-201ENST00000294008 UNC45BQ8IWX7 931 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 LSG1Q9H089 658 aaKnown RBP13.2□□□□□ -0.3
SLX4-201ENST00000294008 STK17AQ9UEE5 414 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 SOX13Q9UN79 622 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 PLD3Q8IV08 490 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 MB21D1Q8N884 522 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 MAGED4Q96JG8 741 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 GPR101Q96P66 508 aaPredicted RBP13.2□□□□□ -0.3
SLX4-201ENST00000294008 NDEL1Q9GZM8 345 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 SENP2Q9HC62 589 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 LATS2Q9NRM7 1088 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 NFICP08651 508 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 ARF5P84085 180 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 CUL4AQ13619 759 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 SMYD4Q8IYR2 804 aaPredicted RBP13.2□□□□□ -0.3
SLX4-201ENST00000294008 USP28Q96RU2 1077 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 RNPEPQ9H4A4 650 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 BCL2L12Q9HB09 334 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 AATKQ6ZMQ8 1374 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 LINC00854A0A1B0GVQ3 168 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 C21orf2O43822 256 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 RASGRF1Q13972 1273 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 C1orf146Q5VVC0 180 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 EDC3Q96F86 508 aaKnown RBP13.2□□□□□ -0.3
SLX4-201ENST00000294008 IQCA1LA6NCM1 817 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 TTLL1O95922 423 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 PDHA1P08559 390 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 PCSK7Q16549 785 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 CIAPIN1Q6FI81 312 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 SPATA18Q8TC71 538 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 EPN3Q9H201 632 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 SPASTQ9UBP0 616 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 E2F8A0AVK6 867 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 TIPRLO75663 272 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 FEN1P39748 380 aaKnown RBP13.19□□□□□ -0.3
SLX4-201ENST00000294008 GPC3P51654 580 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 TWF1Q12792 350 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 MCTP2Q6DN12 878 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 TSPYL6Q8N831 410 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 SUCLG2Q96I99 432 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 TOPORSQ9NS56 1045 aaPredicted RBP13.19□□□□□ -0.3
SLX4-201ENST00000294008 BMP3P12645 472 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 GTF2E2P29084 291 aaKnown RBP13.19□□□□□ -0.3
SLX4-201ENST00000294008 PTGDRQ13258 359 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 PDAP1Q13442 181 aaKnown RBP13.19□□□□□ -0.3
SLX4-201ENST00000294008 SYT2Q8N9I0 419 aaPredicted RBP13.19□□□□□ -0.3
SLX4-201ENST00000294008 PCDHB8Q9UN66 801 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 KPNA7A9QM74 516 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 CTNND1O60716 968 aaKnown RBP13.19□□□□□ -0.3
SLX4-201ENST00000294008 BTKQ06187 659 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 CEP55Q53EZ4 464 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 C6orf10Q5SRN2 563 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 MRPS26Q9BYN8 205 aaKnown RBP13.19□□□□□ -0.3
SLX4-201ENST00000294008 RPS6KB2Q9UBS0 482 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 ZNF711Q9Y462 761 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 TNKSO95271 1327 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 BRAFP15056 766 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 MDM2Q00987 491 aaPredicted RBP13.19□□□□□ -0.3
SLX4-201ENST00000294008 TP53BP2Q13625 1128 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 NOL9Q5SY16 702 aaKnown RBP13.19□□□□□ -0.3
SLX4-201ENST00000294008 RAVER2Q9HCJ3 691 aaKnown RBP13.19□□□□□ -0.3
SLX4-201ENST00000294008 ZHX2Q9Y6X8 837 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 ACADMP11310 421 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 AKAP5P24588 427 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 SLC7A5Q01650 507 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 IFNL3Q8IZI9 196 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 THTPAQ9BU02 230 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 MOV10L1Q9BXT6 1211 aaKnown RBP13.19□□□□□ -0.3
SLX4-201ENST00000294008 NDOR1Q9UHB4 597 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 PFKFB1P16118 471 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 SMARCA1P28370 1054 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 PPP2R5BQ15173 497 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 KCNV2Q8TDN2 545 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 CDHR1Q96JP9 859 aa13.19□□□□□ -0.3
SLX4-201ENST00000294008 DDX50Q9BQ39 737 aaKnown RBP13.19□□□□□ -0.3
SLX4-201ENST00000294008 ENO2P09104 434 aaPredicted RBP13.18□□□□□ -0.3
SLX4-201ENST00000294008 CHRNDQ07001 517 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 BEND6Q5SZJ8 279 aaPredicted RBP13.18□□□□□ -0.3
SLX4-201ENST00000294008 TRAF7Q6Q0C0 670 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 USP6NLQ92738 828 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 YTHDC2Q9H6S0 1430 aaKnown RBP13.18□□□□□ -0.3
SLX4-201ENST00000294008 CYP19A1P11511 503 aaPredicted RBP13.18□□□□□ -0.3
SLX4-201ENST00000294008 EIF2B5Q13144 721 aaKnown RBP13.18□□□□□ -0.3
SLX4-201ENST00000294008 PDIK1LQ8N165 341 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 OSBPL6Q9BZF3 934 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 ASCC2Q9H1I8 757 aaPredicted RBP13.18□□□□□ -0.3
SLX4-201ENST00000294008 HSPBP1Q9NZL4 362 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 ADAM21Q9UKJ8 722 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 SNX14Q9Y5W7 946 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 SOS1Q07889 1333 aaPredicted RBP13.18□□□□□ -0.3
SLX4-201ENST00000294008 A0A1B0GW55 424 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 TNPO2O14787 897 aaKnown RBP13.18□□□□□ -0.3
SLX4-201ENST00000294008 DUX4L2P0CJ85 424 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms