RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 XKR9Q5GH70 373 aa19.91■□□□□ 0.78
SHKBP1-201ENST00000291842 ARHGEF16Q5VV41 709 aa19.91■□□□□ 0.78
SHKBP1-201ENST00000291842 PRAMEF18Q5VWM3 479 aa19.91■□□□□ 0.78
SHKBP1-201ENST00000291842 FOXR1Q6PIV2 292 aa19.91■□□□□ 0.78
SHKBP1-201ENST00000291842 RNF207Q6ZRF8 634 aa19.91■□□□□ 0.78
SHKBP1-201ENST00000291842 SLFN11Q7Z7L1 901 aa19.91■□□□□ 0.78
SHKBP1-201ENST00000291842 LMBR1Q8WVP7 490 aa19.91■□□□□ 0.78
SHKBP1-201ENST00000291842 KAT5Q92993 513 aa19.91■□□□□ 0.78
SHKBP1-201ENST00000291842 ATG4CQ96DT6 458 aa19.91■□□□□ 0.78
SHKBP1-201ENST00000291842 DDX47Q9H0S4 455 aaKnown RBP19.91■□□□□ 0.78
SHKBP1-201ENST00000291842 THAP2Q9H0W7 228 aa19.91■□□□□ 0.78
SHKBP1-201ENST00000291842 PIM2Q9P1W9 311 aa19.91■□□□□ 0.78
SHKBP1-201ENST00000291842 STXBP5LQ9Y2K9 1186 aa19.91■□□□□ 0.78
SHKBP1-201ENST00000291842 FER1L6Q2WGJ9 1857 aa19.91■□□□□ 0.78
SHKBP1-201ENST00000291842 A0A0A6YYK5 440 aaPredicted RBP19.91■□□□□ 0.78
SHKBP1-201ENST00000291842 USP8P40818 1118 aa19.91■□□□□ 0.78
SHKBP1-201ENST00000291842 PAK2Q13177 524 aa19.91■□□□□ 0.78
SHKBP1-201ENST00000291842 C1orf220Q5T0J3 134 aa19.91■□□□□ 0.78
SHKBP1-201ENST00000291842 SCFD2Q8WU76 684 aa19.91■□□□□ 0.78
SHKBP1-201ENST00000291842 ZIM3Q96PE6 472 aa19.91■□□□□ 0.78
SHKBP1-201ENST00000291842 PDCD2LQ9BRP1 358 aa19.91■□□□□ 0.78
SHKBP1-201ENST00000291842 TBC1D22BQ9NU19 505 aa19.91■□□□□ 0.78
SHKBP1-201ENST00000291842 PPP1R1BQ9UD71 204 aaPredicted RBP19.91■□□□□ 0.78
SHKBP1-201ENST00000291842 RGS17Q9UGC6 210 aaPredicted RBP19.91■□□□□ 0.78
SHKBP1-201ENST00000291842 INTUQ9ULD6 942 aa19.91■□□□□ 0.78
SHKBP1-201ENST00000291842 PGRMC1O00264 195 aaKnown RBP19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 SORBS3O60504 671 aa19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 HSF2BPO75031 334 aa19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 SOX10P56693 466 aa19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 NBPF12Q5TAG4 269 aaPredicted RBP19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 AEBP2Q6ZN18 517 aaPredicted RBP19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 INTS8Q75QN2 995 aaKnown RBP19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 DDX42Q86XP3 938 aaKnown RBP eCLIP19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 ACTRT1Q8TDG2 376 aa19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 CTNNBL1Q8WYA6 563 aaPredicted RBP19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 ARL8AQ96BM9 186 aa19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 RUFY1Q96T51 708 aa19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 VPS33BQ9H267 617 aa19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 TAOK3Q9H2K8 898 aa19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 PXMP2Q9NR77 195 aa19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 CCDC169A6NNP5 214 aa19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 CES2O00748 559 aa19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 KRT14P02533 472 aa19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 BAATQ14032 418 aaPredicted RBP19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 SKIDA1Q1XH10 827 aa19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 DNAJC21Q5F1R6 531 aaKnown RBP19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 TAF3Q5VWG9 929 aa19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 XXYLT1Q8NBI6 393 aa19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 FAM76AQ8TAV0 307 aa19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 ELMO3Q96BJ8 720 aa19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.9■□□□□ 0.787e-6■■■■□ 21.2
SHKBP1-201ENST00000291842 SUCLA2Q9P2R7 463 aaPredicted RBP19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 CHORDC1Q9UHD1 332 aaPredicted RBP19.9■□□□□ 0.78
SHKBP1-201ENST00000291842 KRIT1O00522 736 aa19.89■□□□□ 0.77
SHKBP1-201ENST00000291842 CTNND1O60716 968 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-201ENST00000291842 ZBED4O75132 1171 aa19.89■□□□□ 0.77
SHKBP1-201ENST00000291842 TMEM253P0C7T8 217 aa19.89■□□□□ 0.77
SHKBP1-201ENST00000291842 ERVK-9P63128 1117 aa19.89■□□□□ 0.77
SHKBP1-201ENST00000291842 TNFAIP1Q13829 316 aa19.89■□□□□ 0.77
SHKBP1-201ENST00000291842 ZNF746Q6NUN9 644 aaPredicted RBP19.89■□□□□ 0.77
SHKBP1-201ENST00000291842 SYCE1Q8N0S2 351 aa19.89■□□□□ 0.77
SHKBP1-201ENST00000291842 ZKSCAN4Q969J2 545 aaPredicted RBP19.89■□□□□ 0.77
SHKBP1-201ENST00000291842 SAAL1Q96ER3 474 aa19.89■□□□□ 0.77
SHKBP1-201ENST00000291842 AMFRQ9UKV5 643 aa19.89■□□□□ 0.77
SHKBP1-201ENST00000291842 TELO2Q9Y4R8 837 aa19.89■□□□□ 0.77
SHKBP1-201ENST00000291842 VWA5AO00534 786 aa19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 SART1O43290 800 aaKnown RBP19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 PSMC5P62195 406 aa19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 GTF2BQ00403 316 aa19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 SP4Q02446 784 aa19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 HLTFQ14527 1009 aaKnown RBP eCLIP19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 NAA35Q5VZE5 725 aa19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 LRRC31Q6UY01 552 aa19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 ADAT2Q7Z6V5 191 aaKnown RBP19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 RFFLQ8WZ73 363 aa19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 HES6Q96HZ4 224 aa19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 AGPAT1Q99943 283 aa19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 ACP6Q9NPH0 428 aa19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 HACL1Q9UJ83 578 aa19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 LOXHD1Q8IVV2 1947 aa19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 ANKRD63C9JTQ0 380 aa19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 ZBTB7AO95365 584 aa19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 ADRB2P07550 413 aa19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 GHRHRQ02643 423 aa19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 TTMPQ5BVD1 217 aa19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 CBWD2Q8IUF1 395 aa19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 MICALL2Q8IY33 904 aa19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 CCDC127Q96BQ5 260 aa19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 POP1Q99575 1024 aaKnown RBP19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 SH3GL2Q99962 352 aa19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 AMACRQ9UHK6 382 aa19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 COG5Q9UP83 839 aa19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 GJA3Q9Y6H8 435 aa19.88■□□□□ 0.77
SHKBP1-201ENST00000291842 CCDC172P0C7W6 258 aa19.87■□□□□ 0.77
SHKBP1-201ENST00000291842 MAP2K1Q02750 393 aaPredicted RBP19.87■□□□□ 0.77
SHKBP1-201ENST00000291842 MYBPC2Q14324 1141 aa19.87■□□□□ 0.77
SHKBP1-201ENST00000291842 KIF22Q14807 665 aa19.87■□□□□ 0.77
SHKBP1-201ENST00000291842 ALS2CLQ60I27 953 aa19.87■□□□□ 0.77
SHKBP1-201ENST00000291842 KCTD16Q68DU8 428 aa19.87■□□□□ 0.77
SHKBP1-201ENST00000291842 C4orf19Q8IY42 314 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms