RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 ZC3H11AO75152 810 aaKnown RBP eCLIP9.9□□□□□ -0.82
TFF1-201ENST00000291527 MAFO75444 373 aaPredicted RBP9.9□□□□□ -0.82
TFF1-201ENST00000291527 ASGR2P07307 311 aa9.9□□□□□ -0.82
TFF1-201ENST00000291527 GALTP07902 379 aa9.9□□□□□ -0.82
TFF1-201ENST00000291527 FDPSP14324 419 aaKnown RBP9.9□□□□□ -0.82
TFF1-201ENST00000291527 TMOD1P28289 359 aa9.9□□□□□ -0.82
TFF1-201ENST00000291527 HOXA11P31270 313 aaPredicted RBP9.9□□□□□ -0.82
TFF1-201ENST00000291527 JAK3P52333 1124 aa9.9□□□□□ -0.82
TFF1-201ENST00000291527 FOSBP53539 338 aa9.9□□□□□ -0.82
TFF1-201ENST00000291527 NR5A1Q13285 461 aa9.9□□□□□ -0.82
TFF1-201ENST00000291527 XKR3Q5GH77 459 aa9.9□□□□□ -0.82
TFF1-201ENST00000291527 RARS2Q5T160 578 aaKnown RBP9.9□□□□□ -0.82
TFF1-201ENST00000291527 POTEDQ86YR6 584 aa9.9□□□□□ -0.82
TFF1-201ENST00000291527 VPS52Q8N1B4 723 aa9.9□□□□□ -0.82
TFF1-201ENST00000291527 LRRC43Q8N309 656 aa9.9□□□□□ -0.82
TFF1-201ENST00000291527 NECAB1Q8N987 351 aa9.9□□□□□ -0.82
TFF1-201ENST00000291527 DAGLBQ8NCG7 672 aa9.9□□□□□ -0.82
TFF1-201ENST00000291527 CCDC148Q8NFR7 591 aa9.9□□□□□ -0.82
TFF1-201ENST00000291527 SLC22A17Q8WUG5 538 aa9.9□□□□□ -0.82
TFF1-201ENST00000291527 ZNF274Q96GC6 653 aaPredicted RBP9.9□□□□□ -0.82
TFF1-201ENST00000291527 SCLT1Q96NL6 688 aa9.9□□□□□ -0.82
TFF1-201ENST00000291527 POP1Q99575 1024 aaKnown RBP9.9□□□□□ -0.82
TFF1-201ENST00000291527 GBP3Q9H0R5 595 aa9.9□□□□□ -0.82
TFF1-201ENST00000291527 ZBP1Q9H171 429 aa9.9□□□□□ -0.82
TFF1-201ENST00000291527 KCNMB3Q9NPA1 279 aa9.9□□□□□ -0.82
TFF1-201ENST00000291527 PDRG1Q9NUG6 133 aa9.9□□□□□ -0.82
TFF1-201ENST00000291527 TBC1D13Q9NVG8 400 aa9.9□□□□□ -0.82
TFF1-201ENST00000291527 CACNG4Q9UBN1 327 aa9.9□□□□□ -0.82
TFF1-201ENST00000291527 DDX25Q9UHL0 483 aaKnown RBP9.9□□□□□ -0.82
TFF1-201ENST00000291527 TCEAL9Q9UHQ7 104 aa9.9□□□□□ -0.82
TFF1-201ENST00000291527 DMXL1Q9Y485 3027 aa9.89□□□□□ -0.83
TFF1-201ENST00000291527 DEXIO95424 95 aa9.89□□□□□ -0.83
TFF1-201ENST00000291527 BRD1O95696 1058 aa9.89□□□□□ -0.83
TFF1-201ENST00000291527 EOMESO95936 686 aa9.89□□□□□ -0.83
TFF1-201ENST00000291527 SSBP05455 408 aaKnown RBP eCLIP9.89□□□□□ -0.83
TFF1-201ENST00000291527 SRGAP2CP0DJJ0 459 aa9.89□□□□□ -0.83
TFF1-201ENST00000291527 PSMA5P28066 241 aa9.89□□□□□ -0.83
TFF1-201ENST00000291527 SFNP31947 248 aa9.89□□□□□ -0.83
TFF1-201ENST00000291527 CA8P35219 290 aa9.89□□□□□ -0.83
TFF1-201ENST00000291527 SPIRE1Q08AE8 756 aa9.89□□□□□ -0.83
TFF1-201ENST00000291527 ST3GAL1Q11201 340 aa9.89□□□□□ -0.83
TFF1-201ENST00000291527 CTTNQ14247 550 aaKnown RBP9.89□□□□□ -0.83
TFF1-201ENST00000291527 NONOQ15233 471 aaKnown RBP eCLIP9.89□□□□□ -0.83
TFF1-201ENST00000291527 PTPN21Q16825 1174 aa9.89□□□□□ -0.83
TFF1-201ENST00000291527 ODR4Q5SWX8 454 aa9.89□□□□□ -0.83
TFF1-201ENST00000291527 MCTP2Q6DN12 878 aa9.89□□□□□ -0.83
TFF1-201ENST00000291527 TWF2Q6IBS0 349 aaKnown RBP9.89□□□□□ -0.83
TFF1-201ENST00000291527 POTEGQ6S5H5 508 aa9.89□□□□□ -0.83
TFF1-201ENST00000291527 BMP8AQ7Z5Y6 402 aa9.89□□□□□ -0.83
TFF1-201ENST00000291527 ABI1Q8IZP0 508 aa9.89□□□□□ -0.83
TFF1-201ENST00000291527 ST13P5Q8NFI4 369 aaPredicted RBP9.89□□□□□ -0.83
TFF1-201ENST00000291527 PRPF31Q8WWY3 499 aaKnown RBP9.89□□□□□ -0.83
TFF1-201ENST00000291527 RABGGTAQ92696 567 aa9.89□□□□□ -0.83
TFF1-201ENST00000291527 PPP2R3CQ969Q6 453 aa9.89□□□□□ -0.83
TFF1-201ENST00000291527 IGSF21Q96ID5 467 aa9.89□□□□□ -0.83
TFF1-201ENST00000291527 DYDC2Q96IM9 177 aa9.89□□□□□ -0.83
TFF1-201ENST00000291527 CDCA3Q99618 268 aaPredicted RBP9.89□□□□□ -0.83
TFF1-201ENST00000291527 EIF2AQ9BY44 585 aaKnown RBP9.89□□□□□ -0.83
TFF1-201ENST00000291527 GCOM2Q9BZD3 368 aaPredicted RBP9.89□□□□□ -0.83
TFF1-201ENST00000291527 CXCL16Q9H2A7 254 aa9.89□□□□□ -0.83
TFF1-201ENST00000291527 XPNPEP1Q9NQW7 623 aa9.89□□□□□ -0.83
TFF1-201ENST00000291527 CYP26B1Q9NR63 512 aa9.89□□□□□ -0.83
TFF1-201ENST00000291527 FAM105AQ9NUU6 356 aa9.89□□□□□ -0.83
TFF1-201ENST00000291527 PIN4Q9Y237 131 aaKnown RBP9.89□□□□□ -0.83
TFF1-201ENST00000291527 HES2Q9Y543 173 aa9.89□□□□□ -0.83
TFF1-201ENST00000291527 CYP46A1Q9Y6A2 500 aa9.89□□□□□ -0.83
TFF1-201ENST00000291527 PTPRZ1P23471 2315 aaPredicted RBP9.89□□□□□ -0.83
TFF1-201ENST00000291527 COL4A3Q01955 1670 aa9.88□□□□□ -0.83
TFF1-201ENST00000291527 LILRB3O75022 631 aa9.88□□□□□ -0.83
TFF1-201ENST00000291527 POMCP01189 267 aa9.88□□□□□ -0.83
TFF1-201ENST00000291527 ANP32AP39687 249 aaKnown RBP9.88□□□□□ -0.83
TFF1-201ENST00000291527 PSMC5P62195 406 aa9.88□□□□□ -0.83
TFF1-201ENST00000291527 CYP4A11Q02928 519 aa9.88□□□□□ -0.83
TFF1-201ENST00000291527 LAMTOR4Q0VGL1 99 aa9.88□□□□□ -0.83
TFF1-201ENST00000291527 PPP2R5CQ13362 524 aa9.88□□□□□ -0.83
TFF1-201ENST00000291527 SMC1AQ14683 1233 aaKnown RBP9.88□□□□□ -0.83
TFF1-201ENST00000291527 NOMO2Q5JPE7 1267 aa9.88□□□□□ -0.83
TFF1-201ENST00000291527 PIK3AP1Q6ZUJ8 805 aa9.88□□□□□ -0.83
TFF1-201ENST00000291527 CATSPER4Q7RTX7 472 aa9.88□□□□□ -0.83
TFF1-201ENST00000291527 CDR2LQ86X02 465 aaPredicted RBP9.88□□□□□ -0.83
TFF1-201ENST00000291527 KREMEN2Q8NCW0 462 aa9.88□□□□□ -0.83
TFF1-201ENST00000291527 SMG8Q8ND04 991 aaKnown RBP9.88□□□□□ -0.83
TFF1-201ENST00000291527 ASAP3Q8TDY4 903 aa9.88□□□□□ -0.83
TFF1-201ENST00000291527 TNFRSF25Q93038 417 aa9.88□□□□□ -0.83
TFF1-201ENST00000291527 CPB2Q96IY4 423 aa9.88□□□□□ -0.83
TFF1-201ENST00000291527 MFSD14AQ96MC6 490 aa9.88□□□□□ -0.83
TFF1-201ENST00000291527 TM6SF1Q9BZW5 370 aa9.88□□□□□ -0.83
TFF1-201ENST00000291527 DHX33Q9H6R0 707 aaKnown RBP9.88□□□□□ -0.83
TFF1-201ENST00000291527 NGRNQ9NPE2 291 aaKnown RBP9.88□□□□□ -0.83
TFF1-201ENST00000291527 LIMD1Q9UGP4 676 aa9.88□□□□□ -0.83
TFF1-201ENST00000291527 PUF60Q9UHX1 559 aaKnown RBP9.88□□□□□ -0.83
TFF1-201ENST00000291527 USP20Q9Y2K6 914 aa9.88□□□□□ -0.83
TFF1-201ENST00000291527 PCDHB2Q9Y5E7 798 aa9.88□□□□□ -0.83
TFF1-201ENST00000291527 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.87□□□□□ -0.83
TFF1-201ENST00000291527 TTLL13PA6NNM8 815 aa9.87□□□□□ -0.83
TFF1-201ENST00000291527 CCNT1O60563 726 aaKnown RBP9.87□□□□□ -0.83
TFF1-201ENST00000291527 JAK2O60674 1132 aa9.87□□□□□ -0.83
TFF1-201ENST00000291527 N4BP1O75113 896 aaKnown RBP9.87□□□□□ -0.83
TFF1-201ENST00000291527 SLITRK3O94933 977 aa9.87□□□□□ -0.83
TFF1-201ENST00000291527 REC8O95072 547 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms