RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 SCLT1Q96NL6 688 aa22■■□□□ 1.11
TMED4-201ENST00000289577 SEMA4AQ9H3S1 761 aa22■■□□□ 1.11
TMED4-201ENST00000289577 USP40Q9NVE5 1235 aa22■■□□□ 1.11
TMED4-201ENST00000289577 TMOD4Q9NZQ9 345 aa22■■□□□ 1.11
TMED4-201ENST00000289577 EML1O00423 815 aa21.99■■□□□ 1.11
TMED4-201ENST00000289577 PODXLO00592 558 aa21.99■■□□□ 1.11
TMED4-201ENST00000289577 ALAS1P13196 640 aa21.99■■□□□ 1.11
TMED4-201ENST00000289577 NF2P35240 595 aa21.99■■□□□ 1.11
TMED4-201ENST00000289577 PPP2R5AQ15172 486 aa21.99■■□□□ 1.11
TMED4-201ENST00000289577 INTS9Q9NV88 658 aaKnown RBP21.99■■□□□ 1.11
TMED4-201ENST00000289577 RGL1Q9NZL6 768 aa21.99■■□□□ 1.11
TMED4-201ENST00000289577 PARP2Q9UGN5 583 aa21.99■■□□□ 1.11
TMED4-201ENST00000289577 UBE4BO95155 1302 aa21.99■■□□□ 1.11
TMED4-201ENST00000289577 TLDC2A0PJX2 215 aa21.99■■□□□ 1.11
TMED4-201ENST00000289577 FAM13AO94988 1023 aa21.99■■□□□ 1.11
TMED4-201ENST00000289577 CTTNQ14247 550 aaKnown RBP21.99■■□□□ 1.11
TMED4-201ENST00000289577 ZC2HC1CQ53FD0 456 aaPredicted RBP21.99■■□□□ 1.11
TMED4-201ENST00000289577 MSL1Q68DK7 614 aa21.99■■□□□ 1.11
TMED4-201ENST00000289577 C1orf186Q6ZWK4 172 aa21.99■■□□□ 1.11
TMED4-201ENST00000289577 AMNQ9BXJ7 453 aa21.99■■□□□ 1.11
TMED4-201ENST00000289577 BTAF1O14981 1849 aa21.99■■□□□ 1.11
TMED4-201ENST00000289577 BBOX1O75936 387 aa21.98■■□□□ 1.11
TMED4-201ENST00000289577 KRT13P13646 458 aa21.98■■□□□ 1.11
TMED4-201ENST00000289577 COG2Q14746 738 aa21.98■■□□□ 1.11
TMED4-201ENST00000289577 SLFN13Q68D06 897 aa21.98■■□□□ 1.11
TMED4-201ENST00000289577 AADACL2Q6P093 401 aa21.98■■□□□ 1.11
TMED4-201ENST00000289577 ZDHHC14Q8IZN3 488 aa21.98■■□□□ 1.11
TMED4-201ENST00000289577 MYCT1Q8N699 235 aa21.98■■□□□ 1.11
TMED4-201ENST00000289577 RBM17Q96I25 401 aaKnown RBP21.98■■□□□ 1.11
TMED4-201ENST00000289577 FIZ1Q96SL8 496 aa21.98■■□□□ 1.11
TMED4-201ENST00000289577 AGPAT1Q99943 283 aa21.98■■□□□ 1.11
TMED4-201ENST00000289577 HSD17B14Q9BPX1 270 aa21.98■■□□□ 1.11
TMED4-201ENST00000289577 UBAP1LF5GYI3 381 aa21.98■■□□□ 1.11
TMED4-201ENST00000289577 ATP6V1G2O95670 118 aa21.98■■□□□ 1.11
TMED4-201ENST00000289577 GGPS1O95749 300 aa21.98■■□□□ 1.11
TMED4-201ENST00000289577 HLA-DOAP06340 250 aa21.98■■□□□ 1.11
TMED4-201ENST00000289577 EZRP15311 586 aaKnown RBP21.98■■□□□ 1.11
TMED4-201ENST00000289577 FAM98CQ17RN3 349 aaKnown RBP21.98■■□□□ 1.11
TMED4-201ENST00000289577 TRAPPC3LQ5T215 181 aa21.98■■□□□ 1.11
TMED4-201ENST00000289577 UBAP2Q5T6F2 1119 aaKnown RBP21.98■■□□□ 1.11
TMED4-201ENST00000289577 TTC27Q6P3X3 843 aa21.98■■□□□ 1.11
TMED4-201ENST00000289577 DONSONQ9NYP3 566 aa21.98■■□□□ 1.11
TMED4-201ENST00000289577 MTRF1LQ9UGC7 380 aaKnown RBP21.98■■□□□ 1.11
TMED4-201ENST00000289577 PFASO15067 1338 aa21.97■■□□□ 1.11
TMED4-201ENST00000289577 EEF2P13639 858 aaKnown RBP21.97■■□□□ 1.11
TMED4-201ENST00000289577 RFX1P22670 979 aa21.97■■□□□ 1.11
TMED4-201ENST00000289577 PHLDB3Q6NSJ2 640 aa21.97■■□□□ 1.11
TMED4-201ENST00000289577 CERS5Q8N5B7 392 aa21.97■■□□□ 1.11
TMED4-201ENST00000289577 UBL4BQ8N7F7 174 aa21.97■■□□□ 1.11
TMED4-201ENST00000289577 KRT35Q92764 455 aa21.97■■□□□ 1.11
TMED4-201ENST00000289577 PRMT1Q99873 361 aaKnown RBP21.97■■□□□ 1.11
TMED4-201ENST00000289577 ZSWIM1Q9BR11 485 aa21.97■■□□□ 1.11
TMED4-201ENST00000289577 STMN4Q9H169 189 aaPredicted RBP21.97■■□□□ 1.11
TMED4-201ENST00000289577 ATP6V0A4Q9HBG4 840 aa21.97■■□□□ 1.11
TMED4-201ENST00000289577 NYAP2Q9P242 653 aa21.97■■□□□ 1.11
TMED4-201ENST00000289577 FOXN3O00409 490 aaPredicted RBP21.96■■□□□ 1.11
TMED4-201ENST00000289577 CYP3A4P08684 503 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 TRIM49P0CI25 452 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 TRIM49CP0CI26 452 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 MYL7Q01449 175 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 PPP1R7Q15435 360 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 HIBCHQ6NVY1 386 aaPredicted RBP21.96■■□□□ 1.11
TMED4-201ENST00000289577 ZNF720Q7Z2F6 126 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 LMO3Q8TAP4 145 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 MTFR1LQ9H019 292 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 DNAJC18Q9H819 358 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 PARVGQ9HBI0 331 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 AGPAT3Q9NRZ7 376 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 SAMD15Q9P1V8 674 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 LTBP1Q14766 1721 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 RIPK2O43353 540 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 SLURP2P0DP57 97 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 RARGP13631 454 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 PEX5P50542 639 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 RIPK1Q13546 671 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 SLMAPQ14BN4 828 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 CYP1B1Q16678 543 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 MFSD5Q6N075 450 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 TLDC1Q6P9B6 456 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 HS2ST1Q7LGA3 356 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 TRPM8Q7Z2W7 1104 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 CYP2W1Q8TAV3 490 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 PIGOQ8TEQ8 1089 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 N4BP2L2Q92802 583 aaPredicted RBP21.96■■□□□ 1.11
TMED4-201ENST00000289577 RPS6KC1Q96S38 1066 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 ELAC2Q9BQ52 826 aaKnown RBP21.96■■□□□ 1.11
TMED4-201ENST00000289577 NOD2Q9HC29 1040 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 TUFT1Q9NNX1 390 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 SEPT11Q9NVA2 429 aaKnown RBP21.96■■□□□ 1.11
TMED4-201ENST00000289577 SEL1LQ9UBV2 794 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 FRMD4BQ9Y2L6 1034 aa21.96■■□□□ 1.11
TMED4-201ENST00000289577 TAF1LQ8IZX4 1826 aa21.95■■□□□ 1.11
TMED4-201ENST00000289577 SMIM23A6NLE4 172 aa21.95■■□□□ 1.1
TMED4-201ENST00000289577 KIF1CO43896 1103 aaKnown RBP21.95■■□□□ 1.1
TMED4-201ENST00000289577 MARCKSL1P49006 195 aa21.95■■□□□ 1.1
TMED4-201ENST00000289577 ZNF131P52739 623 aa21.95■■□□□ 1.1
TMED4-201ENST00000289577 AUHQ13825 339 aaKnown RBP21.95■■□□□ 1.1
TMED4-201ENST00000289577 ARHGAP44Q17R89 818 aa21.95■■□□□ 1.1
TMED4-201ENST00000289577 CDC42EP5Q6NZY7 148 aa21.95■■□□□ 1.1
TMED4-201ENST00000289577 CCDC63Q8NA47 563 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms