RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 VGLL2Q8N8G2 317 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 CCDC97Q96F63 343 aaPredicted RBP12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 ABHD10Q9NUJ1 306 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 TYW1Q9NV66 732 aaKnown RBP12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 TBK1Q9UHD2 729 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 NDC80O14777 642 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 KIF11P52732 1056 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 PPP2R2AP63151 447 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 MCPH1Q8NEM0 835 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 ZNF473Q8WTR7 871 aaKnown RBP12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 LARP4BQ92615 738 aaKnown RBP12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 FUT8Q9BYC5 575 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 RGS17Q9UGC6 210 aaPredicted RBP12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 NUB1Q9Y5A7 615 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 LRRC37A3O60309 1634 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 ANO9A1A5B4 782 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 PPP1R12AO14974 1030 aaPredicted RBP12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 STRNO43815 780 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 XRCC5P13010 732 aaKnown RBP12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 HOXA7P31268 230 aaPredicted RBP12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 DRP2Q13474 957 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 CUL1Q13616 776 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 TTBK2Q6IQ55 1244 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 CYTH2Q99418 400 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 MAK16Q9BXY0 300 aaKnown RBP12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 CPVLQ9H3G5 476 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 ARMCX3Q9UH62 379 aaPredicted RBP12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 CFAP73A6NFT4 308 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 DYNC1LI2O43237 492 aaPredicted RBP12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 FKTNO75072 461 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 TOMM70O94826 608 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 CHGBP05060 677 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 ICAM1P05362 532 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 ALCAMQ13740 583 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 ARL6IP4Q66PJ3 421 aaKnown RBP12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 LRRC31Q6UY01 552 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 PALM2Q8IXS6 379 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 FGD4Q96M96 766 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 ZMYND12Q9H0C1 365 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 NWD2Q9ULI1 1742 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 MAFGO15525 162 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 TEX33O43247 280 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 TMEM191BP0C7N4 346 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 VCAM1P19320 739 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 RAD23BP54727 409 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 LRRC43Q8N309 656 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 CXorf38Q8TB03 319 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 CALR3Q96L12 384 aaKnown RBP12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 GLT1D1Q96MS3 346 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 AIFM3Q96NN9 605 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 EPN3Q9H201 632 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 ATP6V0A4Q9HBG4 840 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 SLC9A2Q9UBY0 812 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 BCRP11274 1271 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 ATF2P15336 505 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 VGLL4Q14135 290 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 LIN9Q5TKA1 542 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 NAIF1Q69YI7 327 aaPredicted RBP12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 CATSPER4Q7RTX7 472 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 GMCL1Q96IK5 515 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 NACA2Q9H009 215 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 GJB4Q9NTQ9 266 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 CICQ96RK0 1608 aaPredicted RBP12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 HNRNPDLO14979 420 aaKnown RBP12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 NPM3O75607 178 aaKnown RBP12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 PHKA2P46019 1235 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 HERVK_113P62684 666 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 SLC20A2Q08357 652 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 C6orf118Q5T5N4 469 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 KIAA1841Q6NSI8 718 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 ALDH8A1Q9H2A2 487 aaPredicted RBP12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 RWDD2AQ9UIY3 292 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 ANGPTL2Q9UKU9 493 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 TRIM17Q9Y577 477 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 TBC1D12O60347 775 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 GMNNO75496 209 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 HNRNPCP07910 306 aaKnown RBP eCLIP12.19□□□□□ -0.465e-6■■■□□ 18.1
NPC1L1-201ENST00000289547 PIP4K2CQ8TBX8 421 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 ETNK1Q9HBU6 452 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 SYNPO2Q9UMS6 1093 aa12.19□□□□□ -0.46
NPC1L1-201ENST00000289547 DENND3A2RUS2 1198 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 SART1O43290 800 aaKnown RBP12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 NR3C2P08235 984 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 TOB2Q14106 344 aaPredicted RBP12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 CYP4F22Q6NT55 531 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 METTL23Q86XA0 190 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 CHMP6Q96FZ7 201 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 PBKQ96KB5 322 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 ACCSQ96QU6 501 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 APOL6Q9BWW8 343 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 PITPNM3Q9BZ71 974 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 TMEM206Q9H813 350 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 ANKFY1Q9P2R3 1169 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 TRPM3Q9HCF6 1732 aaPredicted RBP12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 MAPK13O15264 365 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 PHEXP78562 749 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 CUL3Q13618 768 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 ZNF658Q5TYW1 1059 aaPredicted RBP12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 CLEC10AQ8IUN9 316 aa12.18□□□□□ -0.46
NPC1L1-201ENST00000289547 PCSK9Q8NBP7 692 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms