RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 GLE1Q53GS7 698 aaKnown RBP13.46□□□□□ -0.26
SLC6A1-201ENST00000287766 HP1BP3Q5SSJ5 553 aaPredicted RBP13.46□□□□□ -0.26
SLC6A1-201ENST00000287766 SSU72P8A0A1W2PR75 194 aa13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 ATF2P15336 505 aa13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 FXR2P51116 673 aaKnown RBP eCLIP13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 IRAK1P51617 712 aa13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 POLGP54098 1239 aaPredicted RBP13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 LMBRD2Q68DH5 695 aaPredicted RBP13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 NXNQ6DKJ4 435 aa13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 PAGR1Q9BTK6 254 aa13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 GGT7Q9UJ14 662 aa13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 EMSYQ7Z589 1322 aa13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 NOP56O00567 594 aaKnown RBP13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 DYNLT1P63172 113 aa13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 SLC10A5Q5PT55 438 aa13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 C10orf76Q5T2E6 689 aa13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 TEX2Q8IWB9 1127 aa13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 DAGLBQ8NCG7 672 aa13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 PNMA5Q96PV4 448 aa13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 INTS2Q9H0H0 1204 aaKnown RBP13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 BCAP29Q9UHQ4 241 aa13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 SSX2IPQ9Y2D8 614 aa13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 PCDHB4Q9Y5E5 795 aa13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 DIAPH2O60879 1101 aa13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 CD58P19256 250 aa13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 PIK3CAP42336 1068 aa13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 PRELPP51888 382 aa13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 OSTNP61366 133 aa13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 ARHGEF18Q6ZSZ5 1173 aa13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 CYP2W1Q8TAV3 490 aa13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 MASTLQ96GX5 879 aa13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 HNRNPCP07910 306 aaKnown RBP eCLIP13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 HNRNPH1P31943 449 aaKnown RBP13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 WDR59Q6PJI9 974 aa13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 PODNQ7Z5L7 613 aa13.45□□□□□ -0.26
SLC6A1-201ENST00000287766 GOLGA8SH3BPF8 625 aa13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 PPP1R18Q6NYC8 613 aa13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 ANKRD35Q8N283 1001 aa13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 SUPT20HQ8NEM7 779 aa13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 PPWD1Q96BP3 646 aaKnown RBP13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 ADAM33Q9BZ11 813 aa13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 EHD4Q9H223 541 aa13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 ETNK1Q9HBU6 452 aa13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 BLOC1S4Q9NUP1 217 aa13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 CCDC188H7C350 402 aa13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 ATMINO43313 823 aaPredicted RBP13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 DNAJC8O75937 253 aaPredicted RBP13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 ECEL1O95672 775 aa13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 ESRRAP11474 423 aaPredicted RBP13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 CUL1Q13616 776 aa13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 TMED2Q15363 201 aa13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 RC3H1Q5TC82 1133 aaKnown RBP13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 PAPD7Q5XG87 772 aaKnown RBP13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 KIRREL3Q8IZU9 778 aa13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 METTL13Q8N6R0 699 aa13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 ANKS1AQ92625 1134 aa13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 ZNF668Q96K58 619 aaPredicted RBP13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 KCND1Q9NSA2 647 aa13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 LRRC10BA6NIK2 292 aa13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 LRRC14Q15048 493 aa13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 IRF2BP1Q8IU81 584 aa13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 SP8Q8IXZ3 490 aa13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 ATP2A3Q93084 1043 aa13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 RNPC3Q96LT9 517 aaKnown RBP13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 PITPNM3Q9BZ71 974 aa13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 HAUS2Q9NVX0 235 aa13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 ANAPC7Q9UJX3 599 aa13.44□□□□□ -0.26
SLC6A1-201ENST00000287766 AFF2P51816 1311 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 KLRC4O43908 158 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 CA4P22748 312 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 SLC30A9Q6PML9 568 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 MCF2L2Q86YR7 1114 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 SLC35G2Q8TBE7 412 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 PPP4R1Q8TF05 950 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 NT5C2P49902 561 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 IRX1P78414 480 aaPredicted RBP13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 ORC2Q13416 577 aaPredicted RBP13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 LRRC31Q6UY01 552 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 XXYLT1Q8NBI6 393 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 PDZD8Q8NEN9 1154 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 SLC30A5Q8TAD4 765 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 ATP6V1G3Q96LB4 118 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 RUSC1Q9BVN2 902 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 FBXO28Q9NVF7 368 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 A0A1W2PQJ5 194 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 SOX5P35711 763 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 ESRRGP62508 458 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 KIF22Q14807 665 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 FRMD5Q7Z6J6 570 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 LONP2Q86WA8 852 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 C1orf54Q8WWF1 131 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 TMEM206Q9H813 350 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 DDX4Q9NQI0 724 aaKnown RBP13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 CNOT8Q9UFF9 292 aaKnown RBP13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 PRR12Q9ULL5 1215 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 SCINQ9Y6U3 715 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 PABPN1LA6NDY0 278 aaKnown RBP13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 PDXKO00764 312 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 APOEP02649 317 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms