RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 PLCB3Q01970 1234 aa17.03■□□□□ 0.32
PDE6D-201ENST00000287600 TTC38Q5R3I4 469 aa17.03■□□□□ 0.32
PDE6D-201ENST00000287600 KCNT2Q6UVM3 1135 aa17.03■□□□□ 0.32
PDE6D-201ENST00000287600 ECHDC2Q86YB7 292 aa17.03■□□□□ 0.32
PDE6D-201ENST00000287600 VN1R2Q8NFZ6 395 aa17.03■□□□□ 0.32
PDE6D-201ENST00000287600 RPGRIP1Q96KN7 1286 aa17.03■□□□□ 0.32
PDE6D-201ENST00000287600 MFSD14AQ96MC6 490 aa17.03■□□□□ 0.32
PDE6D-201ENST00000287600 PHF7Q9BWX1 381 aaPredicted RBP17.03■□□□□ 0.32
PDE6D-201ENST00000287600 RNF19AQ9NV58 838 aa17.03■□□□□ 0.32
PDE6D-201ENST00000287600 MUC6Q6W4X9 2439 aa17.02■□□□□ 0.32
PDE6D-201ENST00000287600 LOC730098B7Z3J9 87 aa17.02■□□□□ 0.32
PDE6D-201ENST00000287600 FGFR4P22455 802 aa17.02■□□□□ 0.32
PDE6D-201ENST00000287600 TRAPPC10P48553 1259 aa17.02■□□□□ 0.32
PDE6D-201ENST00000287600 KRT17Q04695 432 aa17.02■□□□□ 0.32
PDE6D-201ENST00000287600 MTERF2Q49AM1 385 aa17.02■□□□□ 0.32
PDE6D-201ENST00000287600 NCAPH2Q6IBW4 605 aa17.02■□□□□ 0.32
PDE6D-201ENST00000287600 LLGL2Q6P1M3 1020 aa17.02■□□□□ 0.32
PDE6D-201ENST00000287600 LRRC55Q6ZSA7 311 aa17.02■□□□□ 0.32
PDE6D-201ENST00000287600 EDAQ92838 391 aa17.02■□□□□ 0.32
PDE6D-201ENST00000287600 SNX21Q969T3 373 aa17.02■□□□□ 0.32
PDE6D-201ENST00000287600 MTMR9Q96QG7 549 aa17.02■□□□□ 0.32
PDE6D-201ENST00000287600 TMEM60Q9H2L4 133 aa17.02■□□□□ 0.32
PDE6D-201ENST00000287600 TTC12Q9H892 705 aaPredicted RBP17.02■□□□□ 0.32
PDE6D-201ENST00000287600 TECP42680 631 aa17.01■□□□□ 0.31
PDE6D-201ENST00000287600 PSMC5P62195 406 aa17.01■□□□□ 0.31
PDE6D-201ENST00000287600 SPIRE1Q08AE8 756 aa17.01■□□□□ 0.31
PDE6D-201ENST00000287600 ORC2Q13416 577 aaPredicted RBP17.01■□□□□ 0.31
PDE6D-201ENST00000287600 NBR1Q14596 966 aa17.01■□□□□ 0.31
PDE6D-201ENST00000287600 EPHA7Q15375 998 aa17.01■□□□□ 0.31
PDE6D-201ENST00000287600 CLLU1OSQ5K130 101 aa17.01■□□□□ 0.31
PDE6D-201ENST00000287600 ALYREFQ86V81 257 aaKnown RBP17.01■□□□□ 0.31
PDE6D-201ENST00000287600 HELQQ8TDG4 1101 aa17.01■□□□□ 0.31
PDE6D-201ENST00000287600 FBXL18Q96ME1 805 aa17.01■□□□□ 0.31
PDE6D-201ENST00000287600 KCNH6Q9H252 994 aa17.01■□□□□ 0.31
PDE6D-201ENST00000287600 NGRNQ9NPE2 291 aaKnown RBP17.01■□□□□ 0.31
PDE6D-201ENST00000287600 DACT1Q9NYF0 836 aa17.01■□□□□ 0.31
PDE6D-201ENST00000287600 TMEM150BA6NC51 233 aa17■□□□□ 0.31
PDE6D-201ENST00000287600 DDX11L8A8MPP1 907 aa17■□□□□ 0.31
PDE6D-201ENST00000287600 P4HBP07237 508 aaKnown RBP17■□□□□ 0.31
PDE6D-201ENST00000287600 ATF7P17544 494 aaPredicted RBP17■□□□□ 0.31
PDE6D-201ENST00000287600 CA8P35219 290 aa17■□□□□ 0.31
PDE6D-201ENST00000287600 QARSP47897 775 aaKnown RBP17■□□□□ 0.31
PDE6D-201ENST00000287600 TOB1P50616 345 aaPredicted RBP17■□□□□ 0.31
PDE6D-201ENST00000287600 DRP2Q13474 957 aa17■□□□□ 0.31
PDE6D-201ENST00000287600 CBX2Q14781 532 aaPredicted RBP17■□□□□ 0.31
PDE6D-201ENST00000287600 XKR3Q5GH77 459 aa17■□□□□ 0.31
PDE6D-201ENST00000287600 ANKRD54Q6NXT1 300 aa17■□□□□ 0.31
PDE6D-201ENST00000287600 TMC7Q7Z402 723 aa17■□□□□ 0.31
PDE6D-201ENST00000287600 SUSD6Q92537 303 aa17■□□□□ 0.31
PDE6D-201ENST00000287600 INTS4Q96HW7 963 aaKnown RBP17■□□□□ 0.31
PDE6D-201ENST00000287600 SH2D3AQ9BRG2 576 aa17■□□□□ 0.31
PDE6D-201ENST00000287600 MRPL9Q9BYD2 267 aaKnown RBP17■□□□□ 0.31
PDE6D-201ENST00000287600 GCOM2Q9BZD3 368 aaPredicted RBP17■□□□□ 0.31
PDE6D-201ENST00000287600 SPG21Q9NZD8 308 aa17■□□□□ 0.31
PDE6D-201ENST00000287600 RGL1Q9NZL6 768 aa17■□□□□ 0.31
PDE6D-201ENST00000287600 TECTAO75443 2155 aa16.99■□□□□ 0.31
PDE6D-201ENST00000287600 A0A0U1RQF3 1178 aa16.99■□□□□ 0.31
PDE6D-201ENST00000287600 TMEM221A6NGB7 291 aa16.99■□□□□ 0.31
PDE6D-201ENST00000287600 HIDE1A8MVS5 230 aa16.99■□□□□ 0.31
PDE6D-201ENST00000287600 M0R296 226 aa16.99■□□□□ 0.31
PDE6D-201ENST00000287600 DKC1O60832 514 aaKnown RBP eCLIP16.99■□□□□ 0.31
PDE6D-201ENST00000287600 CSDE1O75534 798 aaKnown RBP16.99■□□□□ 0.31
PDE6D-201ENST00000287600 OR52Z1P0C646 297 aa16.99■□□□□ 0.31
PDE6D-201ENST00000287600 PDCP20941 246 aa16.99■□□□□ 0.31
PDE6D-201ENST00000287600 SFPQP23246 707 aaKnown RBP eCLIP16.99■□□□□ 0.31
PDE6D-201ENST00000287600 DNM2P50570 870 aa16.99■□□□□ 0.31
PDE6D-201ENST00000287600 NHLH1Q02575 133 aa16.99■□□□□ 0.31
PDE6D-201ENST00000287600 CYP4A11Q02928 519 aa16.99■□□□□ 0.31
PDE6D-201ENST00000287600 SMC1AQ14683 1233 aaKnown RBP16.99■□□□□ 0.31
PDE6D-201ENST00000287600 TARBP2Q15633 366 aaKnown RBP16.99■□□□□ 0.31
PDE6D-201ENST00000287600 TRIM67Q6ZTA4 783 aa16.99■□□□□ 0.31
PDE6D-201ENST00000287600 HSCBQ8IWL3 235 aa16.99■□□□□ 0.31
PDE6D-201ENST00000287600 DYDC2Q96IM9 177 aa16.99■□□□□ 0.31
PDE6D-201ENST00000287600 APOL5Q9BWW9 433 aa16.99■□□□□ 0.31
PDE6D-201ENST00000287600 NIFKQ9BYG3 293 aaKnown RBP16.99■□□□□ 0.31
PDE6D-201ENST00000287600 PCDHB6Q9Y5E3 794 aa16.99■□□□□ 0.31
PDE6D-201ENST00000287600 ZNF318Q5VUA4 2279 aa16.99■□□□□ 0.31
PDE6D-201ENST00000287600 A0A087WZ62 844 aa16.98■□□□□ 0.31
PDE6D-201ENST00000287600 VPS37CA5D8V6 355 aaPredicted RBP16.98■□□□□ 0.31
PDE6D-201ENST00000287600 STBD1O95210 358 aa16.98■□□□□ 0.31
PDE6D-201ENST00000287600 EOMESO95936 686 aa16.98■□□□□ 0.31
PDE6D-201ENST00000287600 ZXDAP98168 799 aa16.98■□□□□ 0.31
PDE6D-201ENST00000287600 CDC42EP1Q00587 391 aa16.98■□□□□ 0.31
PDE6D-201ENST00000287600 KCNC3Q14003 757 aa16.98■□□□□ 0.31
PDE6D-201ENST00000287600 CTTNQ14247 550 aaKnown RBP16.98■□□□□ 0.31
PDE6D-201ENST00000287600 RILPL1Q5EBL4 403 aa16.98■□□□□ 0.31
PDE6D-201ENST00000287600 TMEM184AQ6ZMB5 413 aa16.98■□□□□ 0.31
PDE6D-201ENST00000287600 ZNF598Q86UK7 904 aaKnown RBP16.98■□□□□ 0.31
PDE6D-201ENST00000287600 TPH2Q8IWU9 490 aa16.98■□□□□ 0.31
PDE6D-201ENST00000287600 SUGP1Q8IWZ8 645 aaKnown RBP16.98■□□□□ 0.31
PDE6D-201ENST00000287600 SLC39A11Q8N1S5 342 aa16.98■□□□□ 0.31
PDE6D-201ENST00000287600 EIF2AK1Q9BQI3 630 aaKnown RBP16.98■□□□□ 0.31
PDE6D-201ENST00000287600 FDXACB1Q9BRP7 624 aaPredicted RBP16.98■□□□□ 0.31
PDE6D-201ENST00000287600 LXNQ9BS40 222 aa16.98■□□□□ 0.31
PDE6D-201ENST00000287600 CHST12Q9NRB3 414 aa16.98■□□□□ 0.31
PDE6D-201ENST00000287600 WRAP73Q9P2S5 460 aaPredicted RBP16.98■□□□□ 0.31
PDE6D-201ENST00000287600 PIN4Q9Y237 131 aaKnown RBP16.98■□□□□ 0.31
PDE6D-201ENST00000287600 POTEMA6NI47 508 aa16.97■□□□□ 0.31
PDE6D-201ENST00000287600 SLITRK3O94933 977 aa16.97■□□□□ 0.31
PDE6D-201ENST00000287600 SP100P23497 879 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms