RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 ASAP2O43150 1006 aa11.22□□□□□ -0.61
SKA1-201ENST00000285116 TGFB1I1O43294 461 aa11.22□□□□□ -0.61
SKA1-201ENST00000285116 PSMC2P35998 433 aaKnown RBP11.22□□□□□ -0.61
SKA1-201ENST00000285116 ZNF131P52739 623 aa11.22□□□□□ -0.61
SKA1-201ENST00000285116 KIF22Q14807 665 aa11.22□□□□□ -0.61
SKA1-201ENST00000285116 KRT71Q3SY84 523 aa11.22□□□□□ -0.61
SKA1-201ENST00000285116 BTNL9Q6UXG8 535 aa11.22□□□□□ -0.61
SKA1-201ENST00000285116 GPIHBP1Q8IV16 184 aa11.22□□□□□ -0.61
SKA1-201ENST00000285116 SLC9A9Q8IVB4 645 aa11.22□□□□□ -0.61
SKA1-201ENST00000285116 KIRREL3Q8IZU9 778 aa11.22□□□□□ -0.61
SKA1-201ENST00000285116 LNX1Q8TBB1 728 aaPredicted RBP11.22□□□□□ -0.61
SKA1-201ENST00000285116 GJA10Q969M2 543 aa11.22□□□□□ -0.61
SKA1-201ENST00000285116 STAMBPL1Q96FJ0 436 aa11.22□□□□□ -0.61
SKA1-201ENST00000285116 KANSL2Q9H9L4 492 aa11.22□□□□□ -0.61
SKA1-201ENST00000285116 USP20Q9Y2K6 914 aa11.22□□□□□ -0.61
SKA1-201ENST00000285116 UTP11Q9Y3A2 253 aaKnown RBP11.22□□□□□ -0.61
SKA1-201ENST00000285116 USP17L15C9J2P7 530 aa11.21□□□□□ -0.61
SKA1-201ENST00000285116 USP17L13C9JLJ4 530 aa11.21□□□□□ -0.61
SKA1-201ENST00000285116 USP17L11C9JVI0 530 aa11.21□□□□□ -0.61
SKA1-201ENST00000285116 USP17L18D6R9N7 530 aa11.21□□□□□ -0.61
SKA1-201ENST00000285116 USP17L22D6RA61 530 aa11.21□□□□□ -0.61
SKA1-201ENST00000285116 USP17L17D6RBQ6 530 aa11.21□□□□□ -0.61
SKA1-201ENST00000285116 USP17L19D6RCP7 530 aa11.21□□□□□ -0.61
SKA1-201ENST00000285116 USP17L20D6RJB6 530 aa11.21□□□□□ -0.61
SKA1-201ENST00000285116 STAT3P40763 770 aa11.21□□□□□ -0.61
SKA1-201ENST00000285116 FKBP1AP62942 108 aaKnown RBP11.21□□□□□ -0.61
SKA1-201ENST00000285116 ICA1Q05084 483 aa11.21□□□□□ -0.61
SKA1-201ENST00000285116 USP17L24Q0WX57 530 aa11.21□□□□□ -0.61
SKA1-201ENST00000285116 MYO1EQ12965 1108 aa11.21□□□□□ -0.61
SKA1-201ENST00000285116 DUPD1Q68J44 220 aa11.21□□□□□ -0.61
SKA1-201ENST00000285116 USP17L6PQ6QN14 398 aa11.21□□□□□ -0.61
SKA1-201ENST00000285116 PGM2Q96G03 612 aa11.21□□□□□ -0.61
SKA1-201ENST00000285116 AMNQ9BXJ7 453 aa11.21□□□□□ -0.61
SKA1-201ENST00000285116 ZDHHC18Q9NUE0 388 aa11.21□□□□□ -0.61
SKA1-201ENST00000285116 PFASO15067 1338 aa11.21□□□□□ -0.62
SKA1-201ENST00000285116 GGPS1O95749 300 aa11.21□□□□□ -0.62
SKA1-201ENST00000285116 SLC16A2P36021 539 aa11.21□□□□□ -0.62
SKA1-201ENST00000285116 CCNHP51946 323 aaPredicted RBP11.21□□□□□ -0.62
SKA1-201ENST00000285116 GALCP54803 685 aa11.21□□□□□ -0.62
SKA1-201ENST00000285116 PSMC6P62333 389 aa11.21□□□□□ -0.62
SKA1-201ENST00000285116 PLS1Q14651 629 aa11.21□□□□□ -0.62
SKA1-201ENST00000285116 C11orf63Q6NUN7 778 aa11.21□□□□□ -0.62
SKA1-201ENST00000285116 DDX42Q86XP3 938 aaKnown RBP eCLIP11.21□□□□□ -0.62
SKA1-201ENST00000285116 GPR88Q9GZN0 384 aa11.21□□□□□ -0.62
SKA1-201ENST00000285116 DDX47Q9H0S4 455 aaKnown RBP11.21□□□□□ -0.62
SKA1-201ENST00000285116 PCDHAC2Q9Y5I4 1007 aa11.21□□□□□ -0.62
SKA1-201ENST00000285116 SLX4Q8IY92 1834 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 CTNND1O60716 968 aaKnown RBP11.2□□□□□ -0.62
SKA1-201ENST00000285116 TBCAO75347 108 aaKnown RBP11.2□□□□□ -0.62
SKA1-201ENST00000285116 GCKP35557 465 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 SARNPP82979 210 aaKnown RBP11.2□□□□□ -0.62
SKA1-201ENST00000285116 PPARDQ03181 441 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 CDC42EP5Q6NZY7 148 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 TATDN1Q6P1N9 297 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 KCTD1Q719H9 257 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 DAAM2Q86T65 1068 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 HOOK3Q86VS8 718 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 CLEC10AQ8IUN9 316 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 EGFL6Q8IUX8 553 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 CERS5Q8N5B7 392 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 MORC4Q8TE76 937 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 P2RX7Q99572 595 aaKnown RBP11.2□□□□□ -0.62
SKA1-201ENST00000285116 CCDC134Q9H6E4 229 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 USP40Q9NVE5 1235 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 CNOT7Q9UIV1 285 aaKnown RBP11.2□□□□□ -0.62
SKA1-201ENST00000285116 DCDC2CA8MYV0 355 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 MIF4GDA9UHW6 222 aaKnown RBP11.2□□□□□ -0.62
SKA1-201ENST00000285116 DAPK3O43293 454 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 EVI5O60447 810 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 MTA2O94776 668 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 ANP32DO95626 131 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 FMO5P49326 533 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 CACNB1Q02641 598 aaPredicted RBP11.2□□□□□ -0.62
SKA1-201ENST00000285116 TRAF1Q13077 416 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 PABPC4Q13310 644 aaKnown RBP eCLIP11.2□□□□□ -0.628e-8■□□□□ 10.9
SKA1-201ENST00000285116 PICALMQ13492 652 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 PIGWQ7Z7B1 504 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 TCP11Q8WWU5 503 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 ZNF317Q96PQ6 595 aaPredicted RBP11.2□□□□□ -0.62
SKA1-201ENST00000285116 HSD17B14Q9BPX1 270 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 STRA6Q9BX79 667 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 AP1M1Q9BXS5 423 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 DBNDD1Q9H9R9 158 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 NOP53Q9NZM5 478 aaKnown RBP11.2□□□□□ -0.62
SKA1-201ENST00000285116 TRPC6Q9Y210 931 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 RABGAP1Q9Y3P9 1069 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 MYH11P35749 1972 aa11.2□□□□□ -0.62
SKA1-201ENST00000285116 PMM2O15305 246 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 MSH4O15457 936 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 CLTAP09496 248 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 ITGA4P13612 1032 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 EIF6P56537 245 aaKnown RBP11.19□□□□□ -0.62
SKA1-201ENST00000285116 GTF2IP78347 998 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 PPP2R5CQ13362 524 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 ZNF268Q14587 947 aaPredicted RBP11.19□□□□□ -0.62
SKA1-201ENST00000285116 DCAF12L1Q5VU92 463 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 APOBEC3HQ6NTF7 200 aaKnown RBP11.19□□□□□ -0.62
SKA1-201ENST00000285116 RINT1Q6NUQ1 792 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 STXBP4Q6ZWJ1 553 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 C1orf186Q6ZWK4 172 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms