RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 IFNGR1P15260 489 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 USP14P54578 494 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 DRG2P55039 364 aaKnown RBP3.08□□□□□ -1.92
CHD1-201ENST00000284049 GPSM2P81274 684 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 MST1RQ04912 1400 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 NR0B2Q15466 257 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.08□□□□□ -1.921e-7■■□□□ 13.4
CHD1-201ENST00000284049 TRAPPC3LQ5T215 181 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 COL13A1Q5TAT6 717 aaPredicted RBP3.08□□□□□ -1.92
CHD1-201ENST00000284049 POTEBQ6S5H4 581 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 KLHDC4Q8TBB5 520 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 ATP2A3Q93084 1043 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 CD244Q9BZW8 370 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 WDR12Q9GZL7 423 aaKnown RBP3.08□□□□□ -1.92
CHD1-201ENST00000284049 SYNCQ9H7C4 482 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 ITM2CQ9NQX7 267 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 NSMCE4AQ9NXX6 385 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 HOOK1Q9UJC3 728 aaKnown RBP3.08□□□□□ -1.92
CHD1-201ENST00000284049 RPS6KA6Q9UK32 745 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 ZNF215Q9UL58 517 aaPredicted RBP3.08□□□□□ -1.92
CHD1-201ENST00000284049 TRPM2O94759 1503 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 SIAH2O43255 324 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 DKC1O60832 514 aaKnown RBP eCLIP3.08□□□□□ -1.92
CHD1-201ENST00000284049 BAG2O95816 211 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 CYP17A1P05093 508 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 GSNP06396 782 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 POLBP06746 335 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 KRT10P13645 584 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 TNNT1P13805 278 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 ASPAP45381 313 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 POLD2P49005 469 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 CREMQ03060 361 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 SEMA5AQ13591 1074 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 HSP90AA5PQ58FG0 334 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 METTL24Q5JXM2 366 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 SNIP1Q8TAD8 396 aaKnown RBP3.08□□□□□ -1.92
CHD1-201ENST00000284049 SLC35A4Q96G79 324 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 APIPQ96GX9 242 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 CFAP53Q96M91 514 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 EIF3CQ99613 913 aaKnown RBP3.08□□□□□ -1.92
CHD1-201ENST00000284049 PRKRIP1Q9H875 184 aaPredicted RBP3.08□□□□□ -1.92
CHD1-201ENST00000284049 TDP1Q9NUW8 608 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 MARCH2Q9P0N8 246 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 ZNF451Q9Y4E5 1061 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 PCDHA13Q9Y5I0 950 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 CDK13Q14004 1512 aaKnown RBP3.08□□□□□ -1.92
CHD1-201ENST00000284049 NAIPQ13075 1403 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 CD109Q6YHK3 1445 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 A0A087WV62 115 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 GNAT3A8MTJ3 354 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 H0Y8X5 98 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 PHGDHO43175 533 aaKnown RBP3.08□□□□□ -1.92
CHD1-201ENST00000284049 ACRP10323 421 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 DESP17661 470 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 XPAP23025 273 aaPredicted RBP3.08□□□□□ -1.92
CHD1-201ENST00000284049 HTR1BP28222 390 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 TPP2P29144 1249 aaPredicted RBP3.08□□□□□ -1.92
CHD1-201ENST00000284049 SNW1Q13573 536 aaKnown RBP3.08□□□□□ -1.92
CHD1-201ENST00000284049 P3H1Q32P28 736 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 ARL13BQ3SXY8 428 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 LIAT1Q6ZQX7 453 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 USP45Q70EL2 814 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 FASTKD5Q7L8L6 764 aaKnown RBP3.08□□□□□ -1.92
CHD1-201ENST00000284049 OTOP3Q7RTS5 596 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 VN1R5Q7Z5H4 357 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 PODNQ7Z5L7 613 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 GOLGA6L1Q8N7Z2 621 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 JADE3Q92613 823 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 ZUFSPQ96AP4 578 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 OXSMQ9NWU1 459 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 AASSQ9UDR5 926 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 ZHX1Q9UKY1 873 aaPredicted RBP3.08□□□□□ -1.92
CHD1-201ENST00000284049 CEP131Q9UPN4 1083 aa3.08□□□□□ -1.92
CHD1-201ENST00000284049 ARHGEF37A1IGU5 675 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 NFKBIEO00221 500 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 GFRA2O00451 464 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 ADAMTS3O15072 1205 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 BUB1BO60566 1050 aaPredicted RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 PEX19P40855 299 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 MRPS35P82673 323 aaKnown RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 DUSP4Q13115 394 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 NPNTQ6UXI9 565 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 RSPO2Q6UXX9 243 aaPredicted RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 MRPL41Q8IXM3 137 aaKnown RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 ZNF713Q8N859 430 aaPredicted RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 ANKRD44Q8N8A2 993 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 GSTCDQ8NEC7 633 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 ZSCAN18Q8TBC5 510 aaPredicted RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 EAF2Q96CJ1 260 aaPredicted RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 IWS1Q96ST2 819 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 FOXQ1Q9C009 403 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 DMRT3Q9NQL9 472 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 PDLIM7Q9NR12 457 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 ATP23Q9Y6H3 246 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 ERBB4Q15303 1308 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 NWD1Q149M9 1564 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 MYO3AQ8NEV4 1616 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 ERVK-7P63135 1459 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 A6NLC8 198 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 TBX18O95935 607 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms