RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 CBWD3Q5JTY5 395 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 CBWD5Q5RIA9 395 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 LMBRD2Q68DH5 695 aaPredicted RBP12.83□□□□□ -0.36
SSRP1-201ENST00000278412 RAD9BQ6WBX8 426 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 RHPN2Q8IUC4 686 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 PPTC7Q8NI37 304 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 SLC35C1Q96A29 364 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 NLRP4Q96MN2 994 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 TTYH3Q9C0H2 523 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 NLRC4Q9NPP4 1024 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 SETD4Q9NVD3 440 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.83□□□□□ -0.36
SSRP1-201ENST00000278412 H3BRB1 525 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 CALUO43852 315 aaPredicted RBP12.83□□□□□ -0.36
SSRP1-201ENST00000278412 EXOC3O60645 756 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 NOL4O94818 638 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 PGK1P00558 417 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 CNGA1P29973 690 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 KRT9P35527 623 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 PPP1R2P41236 205 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 LAMC2Q13753 1193 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 TLK2Q86UE8 772 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 FAM186BQ8IYM0 893 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 TARS2Q9BW92 718 aaKnown RBP12.83□□□□□ -0.36
SSRP1-201ENST00000278412 TMX1Q9H3N1 280 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 TUT1Q9H6E5 874 aaKnown RBP12.83□□□□□ -0.36
SSRP1-201ENST00000278412 DMAC2Q9NW81 257 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 HSPBP1Q9NZL4 362 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 ARHGAP28Q9P2N2 729 aa12.83□□□□□ -0.36
SSRP1-201ENST00000278412 ARMCX3Q9UH62 379 aaPredicted RBP12.83□□□□□ -0.36
SSRP1-201ENST00000278412 EMSYQ7Z589 1322 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 AKR1B15C9JRZ8 316 aaPredicted RBP12.82□□□□□ -0.36
SSRP1-201ENST00000278412 MAFO75444 373 aaPredicted RBP12.82□□□□□ -0.36
SSRP1-201ENST00000278412 OFD1O75665 1012 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 INHBEP58166 350 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 NOLC1Q14978 699 aaKnown RBP eCLIP12.82□□□□□ -0.36
SSRP1-201ENST00000278412 C1orf220Q5T0J3 134 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 EFCAB12Q6NXP0 572 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 KCNV1Q6PIU1 500 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 PPFIBP1Q86W92 1011 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 FAM114A1Q8IWE2 563 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 RNF149Q8NC42 400 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 MCPH1Q8NEM0 835 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 BBXQ8WY36 941 aaPredicted RBP12.82□□□□□ -0.36
SSRP1-201ENST00000278412 KAT2BQ92831 832 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 KIFAP3Q92845 792 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 CEP63Q96MT8 703 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 SMARCAD1Q9H4L7 1026 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 NRBP2Q9NSY0 501 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 HNRNPDLO14979 420 aaKnown RBP12.82□□□□□ -0.36
SSRP1-201ENST00000278412 C22orf31O95567 290 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 MYCP01106 439 aaPredicted RBP12.82□□□□□ -0.36
SSRP1-201ENST00000278412 HOXC6P09630 235 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 TRIM21P19474 475 aaKnown RBP12.82□□□□□ -0.36
SSRP1-201ENST00000278412 FGFR4P22455 802 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 KLRC1P26715 233 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 DNM2P50570 870 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 LAMTOR4Q0VGL1 99 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 NOGQ13253 232 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 ENOX2Q16206 610 aaKnown RBP12.82□□□□□ -0.36
SSRP1-201ENST00000278412 MARCH8Q5T0T0 291 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 PLPPR4Q7Z2D5 763 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 CD99L2Q8TCZ2 262 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 CCDC127Q96BQ5 260 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 ACCSQ96QU6 501 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 APBA2Q99767 749 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 ANKFY1Q9P2R3 1169 aa12.82□□□□□ -0.36
SSRP1-201ENST00000278412 ACOT2P49753 483 aa12.81□□□□□ -0.36
SSRP1-201ENST00000278412 GSDMDP57764 484 aa12.81□□□□□ -0.36
SSRP1-201ENST00000278412 WDR59Q6PJI9 974 aa12.81□□□□□ -0.36
SSRP1-201ENST00000278412 HS2ST1Q7LGA3 356 aa12.81□□□□□ -0.36
SSRP1-201ENST00000278412 MAP4K3Q8IVH8 894 aa12.81□□□□□ -0.36
SSRP1-201ENST00000278412 BICD1Q96G01 975 aa12.81□□□□□ -0.36
SSRP1-201ENST00000278412 C16orf45Q96MC5 204 aaPredicted RBP12.81□□□□□ -0.36
SSRP1-201ENST00000278412 BAG1Q99933 345 aaPredicted RBP12.81□□□□□ -0.36
SSRP1-201ENST00000278412 ABHD10Q9NUJ1 306 aa12.81□□□□□ -0.36
SSRP1-201ENST00000278412 GINS2Q9Y248 185 aa12.81□□□□□ -0.36
SSRP1-201ENST00000278412 IGHA2P01877 340 aa12.81□□□□□ -0.36
SSRP1-201ENST00000278412 CCND3P30281 292 aaPredicted RBP12.81□□□□□ -0.36
SSRP1-201ENST00000278412 RGS2P41220 211 aa12.81□□□□□ -0.36
SSRP1-201ENST00000278412 APLP1P51693 650 aa12.81□□□□□ -0.36
SSRP1-201ENST00000278412 PPP3CAQ08209 521 aa12.81□□□□□ -0.36
SSRP1-201ENST00000278412 DPY19L2P1Q6NXN4 242 aa12.81□□□□□ -0.36
SSRP1-201ENST00000278412 DNAAF5Q86Y56 855 aa12.81□□□□□ -0.36
SSRP1-201ENST00000278412 CCDC150Q8NCX0 1101 aa12.81□□□□□ -0.36
SSRP1-201ENST00000278412 NTPCRQ9BSD7 190 aaKnown RBP12.81□□□□□ -0.36
SSRP1-201ENST00000278412 LSM14BQ9BX40 385 aaKnown RBP12.81□□□□□ -0.36
SSRP1-201ENST00000278412 ERAP1Q9NZ08 941 aa12.81□□□□□ -0.36
SSRP1-201ENST00000278412 SUCLA2Q9P2R7 463 aaPredicted RBP12.81□□□□□ -0.36
SSRP1-201ENST00000278412 ZNF236Q9UL36 1845 aa12.81□□□□□ -0.36
SSRP1-201ENST00000278412 ZBTB33Q86T24 672 aa12.8□□□□□ -0.36
SSRP1-201ENST00000278412 ACRBPQ8NEB7 543 aa12.8□□□□□ -0.36
SSRP1-201ENST00000278412 ZCCHC17Q9NP64 241 aaKnown RBP12.8□□□□□ -0.36
SSRP1-201ENST00000278412 CREBZFQ9NS37 354 aa12.8□□□□□ -0.36
SSRP1-201ENST00000278412 DKC1O60832 514 aaKnown RBP eCLIP12.8□□□□□ -0.36
SSRP1-201ENST00000278412 KIF20AO95235 890 aa12.8□□□□□ -0.36
SSRP1-201ENST00000278412 XRCC5P13010 732 aaKnown RBP12.8□□□□□ -0.36
SSRP1-201ENST00000278412 GCLMP48507 274 aa12.8□□□□□ -0.36
SSRP1-201ENST00000278412 SMTNP53814 917 aa12.8□□□□□ -0.36
SSRP1-201ENST00000278412 NLRP11P59045 1033 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms