RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 DDX19AQ9NUU7 478 aaKnown RBP3.23□□□□□ -1.89
HERC4-201ENST00000277817 SPTLC3Q9NUV7 552 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 TMEM160Q9NX00 188 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 SERPINB13Q9UIV8 391 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 SYNGAP1Q96PV0 1343 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 LRRC37A2A6NM11 1700 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 FLT4P35916 1363 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 DYTNA2CJ06 578 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 TSHRP16473 764 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 PIK3CBP42338 1070 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 FAM193AP78312 1265 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 SLC7A5Q01650 507 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 KIF22Q14807 665 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 RPUSD3Q6P087 351 aaKnown RBP3.23□□□□□ -1.89
HERC4-201ENST00000277817 CNNM3Q8NE01 707 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 JADE3Q92613 823 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 SH3KBP1Q96B97 665 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 MSLNLQ96KJ4 702 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 CCDC43Q96MW1 224 aaKnown RBP3.23□□□□□ -1.89
HERC4-201ENST00000277817 CARD10Q9BWT7 1032 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 SOX17Q9H6I2 414 aaPredicted RBP3.23□□□□□ -1.89
HERC4-201ENST00000277817 SPON1Q9HCB6 807 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 CD248Q9HCU0 757 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 ZCCHC17Q9NP64 241 aaKnown RBP3.23□□□□□ -1.89
HERC4-201ENST00000277817 NMRK2Q9NPI5 230 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 ZNHIT6Q9NWK9 470 aaKnown RBP3.23□□□□□ -1.89
HERC4-201ENST00000277817 EVLQ9UI08 416 aaPredicted RBP3.23□□□□□ -1.89
HERC4-201ENST00000277817 CEP131Q9UPN4 1083 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 KLF18A0A0U1RQI7 1052 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 CTAGE5O15320 804 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 MMP20O60882 483 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 FAM155BO75949 473 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 FGF18O76093 207 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 URI1O94763 535 aaPredicted RBP3.23□□□□□ -1.89
HERC4-201ENST00000277817 FSHRP23945 695 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 TIMM10P62072 90 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 TFCP2Q12800 502 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 ZNF267Q14586 743 aaPredicted RBP3.23□□□□□ -1.89
HERC4-201ENST00000277817 NOLC1Q14978 699 aaKnown RBP eCLIP3.23□□□□□ -1.89
HERC4-201ENST00000277817 SLC4A8Q2Y0W8 1093 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 ANO6Q4KMQ2 910 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 HSP90AA4PQ58FG1 418 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 CAVIN4Q5BKX8 364 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 SPECC1Q5M775 1068 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 FAM173BQ6P4H8 233 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 CNNM4Q6P4Q7 775 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 CCDC186Q7Z3E2 898 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 KIF18AQ8NI77 898 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 ANKS1AQ92625 1134 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 TEKT5Q96M29 485 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 PLEKHF1Q96S99 279 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 RUFY1Q96T51 708 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 PDGFDQ9GZP0 370 aaPredicted RBP3.23□□□□□ -1.89
HERC4-201ENST00000277817 BICC1Q9H694 974 aaKnown RBP3.23□□□□□ -1.89
HERC4-201ENST00000277817 RRAGDQ9NQL2 400 aaPredicted RBP3.23□□□□□ -1.89
HERC4-201ENST00000277817 TMEM39AQ9NV64 488 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 HMG20BQ9P0W2 317 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 TUBD1Q9UJT1 453 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 CRYL1Q9Y2S2 319 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 SOS1Q07889 1333 aaPredicted RBP3.23□□□□□ -1.89
HERC4-201ENST00000277817 ZNF521Q96K83 1311 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 CCDC196A0A1B0GTZ2 297 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 GOLGA8AA7E2F4 631 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 DVL2O14641 736 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 USO1O60763 962 aaKnown RBP3.23□□□□□ -1.89
HERC4-201ENST00000277817 RNF40O75150 1001 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 NR1H2P55055 460 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 ARL4CP56559 192 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 TMPRSS15P98073 1019 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 WASHC5Q12768 1159 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 TRIM32Q13049 653 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 STIM1Q13586 685 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 UVSSAQ2YD98 709 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 ADGRD1Q6QNK2 874 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 DTHD1Q6ZMT9 781 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 PDZD4Q76G19 769 aaPredicted RBP3.23□□□□□ -1.89
HERC4-201ENST00000277817 C11orf74Q86VG3 221 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 COLGALT2Q8IYK4 626 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 C7orf61Q8IZ16 206 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 PCYOX1LQ8NBM8 494 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 NCOA7Q8NI08 942 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 ASB12Q8WXK4 309 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 ABHD17AQ96GS6 310 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 TMEM41AQ96HV5 264 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 KIAA1683Q9H0B3 1180 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 ZSCAN16Q9H4T2 348 aaPredicted RBP3.23□□□□□ -1.89
HERC4-201ENST00000277817 MKNK2Q9HBH9 465 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 GPRC5BQ9NZH0 403 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 PCDHB10Q9UN67 800 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 DOCK2Q92608 1830 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 A0A087X0M5 115 aa3.22□□□□□ -1.89
HERC4-201ENST00000277817 A0A1B0GX30 115 aa3.22□□□□□ -1.89
HERC4-201ENST00000277817 METTL12A8MUP2 240 aa3.22□□□□□ -1.89
HERC4-201ENST00000277817 B3GALT2O43825 422 aa3.22□□□□□ -1.89
HERC4-201ENST00000277817 TOP1P11387 765 aaKnown RBP3.22□□□□□ -1.89
HERC4-201ENST00000277817 GSPT1P15170 499 aaKnown RBP3.22□□□□□ -1.89
HERC4-201ENST00000277817 MARCKSP29966 332 aaPredicted RBP3.22□□□□□ -1.89
HERC4-201ENST00000277817 MCM5P33992 734 aa3.22□□□□□ -1.89
HERC4-201ENST00000277817 NOP2P46087 812 aaKnown RBP3.22□□□□□ -1.89
HERC4-201ENST00000277817 METAP2P50579 478 aaKnown RBP eCLIP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms