RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 JAM2P57087 298 aa13.93□□□□□ -0.18
COL8A1-202ENST00000273342 GSTO1P78417 241 aa13.93□□□□□ -0.18
COL8A1-202ENST00000273342 SEPT2Q15019 361 aa13.93□□□□□ -0.18
COL8A1-202ENST00000273342 MYCT1Q8N699 235 aa13.93□□□□□ -0.18
COL8A1-202ENST00000273342 PCDHA1Q9Y5I3 950 aa13.93□□□□□ -0.18
COL8A1-202ENST00000273342 FOXN3O00409 490 aaPredicted RBP13.92□□□□□ -0.18
COL8A1-202ENST00000273342 RIPK2O43353 540 aa13.92□□□□□ -0.18
COL8A1-202ENST00000273342 RTN2O75298 545 aa13.92□□□□□ -0.18
COL8A1-202ENST00000273342 LDHCP07864 332 aa13.92□□□□□ -0.18
COL8A1-202ENST00000273342 CTTNQ14247 550 aaKnown RBP13.92□□□□□ -0.18
COL8A1-202ENST00000273342 MFSD14BQ5SR56 506 aa13.92□□□□□ -0.18
COL8A1-202ENST00000273342 C6orf118Q5T5N4 469 aa13.92□□□□□ -0.18
COL8A1-202ENST00000273342 C1orf54Q8WWF1 131 aa13.92□□□□□ -0.18
COL8A1-202ENST00000273342 MRRFQ96E11 262 aaKnown RBP13.92□□□□□ -0.18
COL8A1-202ENST00000273342 PGM2Q96G03 612 aa13.92□□□□□ -0.18
COL8A1-202ENST00000273342 RMDN2Q96LZ7 410 aa13.92□□□□□ -0.18
COL8A1-202ENST00000273342 YIPF3Q9GZM5 350 aa13.92□□□□□ -0.18
COL8A1-202ENST00000273342 MTRF1LQ9UGC7 380 aaKnown RBP13.92□□□□□ -0.18
COL8A1-202ENST00000273342 RASAL2Q9UJF2 1139 aa13.92□□□□□ -0.18
COL8A1-202ENST00000273342 NUDT17P0C025 328 aa13.92□□□□□ -0.18
COL8A1-202ENST00000273342 FITM2Q8N6M3 262 aa13.92□□□□□ -0.18
COL8A1-202ENST00000273342 MAGEC3Q8TD91 643 aa13.92□□□□□ -0.18
COL8A1-202ENST00000273342 NSRP1Q9H0G5 558 aaKnown RBP13.92□□□□□ -0.18
COL8A1-202ENST00000273342 USP15Q9Y4E8 981 aaPredicted RBP13.92□□□□□ -0.18
COL8A1-202ENST00000273342 EME2A4GXA9 379 aaPredicted RBP13.91□□□□□ -0.18
COL8A1-202ENST00000273342 FTLP02792 175 aaPredicted RBP13.91□□□□□ -0.18
COL8A1-202ENST00000273342 PYGMP11217 842 aa13.91□□□□□ -0.18
COL8A1-202ENST00000273342 HOXA13P31271 388 aaPredicted RBP13.91□□□□□ -0.18
COL8A1-202ENST00000273342 PPATQ06203 517 aa13.91□□□□□ -0.18
COL8A1-202ENST00000273342 IKQ13123 557 aaPredicted RBP13.91□□□□□ -0.18
COL8A1-202ENST00000273342 ITIH4Q14624 930 aa13.91□□□□□ -0.18
COL8A1-202ENST00000273342 P3H4Q92791 437 aa13.91□□□□□ -0.18
COL8A1-202ENST00000273342 CENPTQ96BT3 561 aa13.91□□□□□ -0.18
COL8A1-202ENST00000273342 NOP53Q9NZM5 478 aaKnown RBP13.91□□□□□ -0.18
COL8A1-202ENST00000273342 TRAF3IP3Q9Y228 551 aa13.91□□□□□ -0.18
COL8A1-202ENST00000273342 AFF2P51816 1311 aa13.91□□□□□ -0.18
COL8A1-202ENST00000273342 KIAA1551Q9HCM1 1747 aa13.91□□□□□ -0.18
COL8A1-202ENST00000273342 MYH14Q7Z406 1995 aaKnown RBP13.91□□□□□ -0.18
COL8A1-202ENST00000273342 DLATP10515 647 aaKnown RBP13.91□□□□□ -0.18
COL8A1-202ENST00000273342 VCAM1P19320 739 aa13.91□□□□□ -0.18
COL8A1-202ENST00000273342 PDE6CP51160 858 aa13.91□□□□□ -0.18
COL8A1-202ENST00000273342 FMNL3Q8IVF7 1028 aa13.91□□□□□ -0.18
COL8A1-202ENST00000273342 HOOK2Q96ED9 719 aa13.91□□□□□ -0.18
COL8A1-202ENST00000273342 CRAMP1Q96RY5 1269 aa13.91□□□□□ -0.18
COL8A1-202ENST00000273342 P2RX7Q99572 595 aaKnown RBP13.91□□□□□ -0.18
COL8A1-202ENST00000273342 PLCD4Q9BRC7 762 aa13.91□□□□□ -0.18
COL8A1-202ENST00000273342 ANO3Q9BYT9 981 aa13.91□□□□□ -0.18
COL8A1-202ENST00000273342 CARD9Q9H257 536 aa13.91□□□□□ -0.18
COL8A1-202ENST00000273342 PCIF1Q9H4Z3 704 aa13.91□□□□□ -0.18
COL8A1-202ENST00000273342 EBF2Q9HAK2 575 aa13.91□□□□□ -0.18
COL8A1-202ENST00000273342 UBAP1LF5GYI3 381 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 H0Y3Z8 333 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 TGFB1I1O43294 461 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 AGTP01019 485 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 LMNB1P20700 586 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 COMTP21964 271 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 RPL13P26373 211 aaKnown RBP13.9□□□□□ -0.18
COL8A1-202ENST00000273342 PTGIRP43119 386 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 ADCY2Q08462 1091 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 ZNF543Q08ER8 600 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 MPP2Q14168 576 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 KYNUQ16719 465 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 PPP4R3CPQ6ZMV5 832 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 TPH2Q8IWU9 490 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 ATG4AQ8WYN0 398 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 PFASO15067 1338 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 TISP43B9A030 160 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 PDXKO00764 312 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 TMEM253P0C7T8 217 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 SPATA31C1P0DKV0 1188 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 UBXN2AP68543 259 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 ORC2Q13416 577 aaPredicted RBP13.9□□□□□ -0.18
COL8A1-202ENST00000273342 ASPRV1Q53RT3 343 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 PRUNE1Q86TP1 453 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 SLC30A5Q8TAD4 765 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 NGLY1Q96IV0 654 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 TMEM237Q96Q45 408 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 TYW1Q9NV66 732 aaKnown RBP13.9□□□□□ -0.18
COL8A1-202ENST00000273342 ROBO3Q96MS0 1386 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 DCCP43146 1447 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 A0A0A6YYK5 440 aaPredicted RBP13.9□□□□□ -0.18
COL8A1-202ENST00000273342 ZBTB5O15062 677 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 SPOPO43791 374 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 UFL1O94874 794 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 CHKAP35790 457 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 FMO5P49326 533 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 PPP4CP60510 307 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 COPS2P61201 443 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 QRICH1Q2TAL8 776 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 HP1BP3Q5SSJ5 553 aaPredicted RBP13.9□□□□□ -0.18
COL8A1-202ENST00000273342 OLIG1Q8TAK6 271 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 KAT5Q92993 513 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 L3MBTL3Q96JM7 780 aaPredicted RBP13.9□□□□□ -0.18
COL8A1-202ENST00000273342 NAP1L3Q99457 506 aaPredicted RBP13.9□□□□□ -0.18
COL8A1-202ENST00000273342 CDC42EP4Q9H3Q1 356 aaKnown RBP13.9□□□□□ -0.18
COL8A1-202ENST00000273342 ETNK1Q9HBU6 452 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 UBE2TQ9NPD8 197 aaPredicted RBP13.9□□□□□ -0.18
COL8A1-202ENST00000273342 ASIC3Q9UHC3 531 aa13.9□□□□□ -0.18
COL8A1-202ENST00000273342 C6orf229H3BNL8 230 aa13.89□□□□□ -0.19
COL8A1-202ENST00000273342 PHF2O75151 1096 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms