RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 REXO1Q8N1G1 1221 aaKnown RBP9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 CCDC33Q8N5R6 958 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 NFATC2IPQ8NCF5 419 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 URGCPQ8TCY9 931 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 HERVK_113Q902F9 699 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 CRNKL1Q9BZJ0 848 aaKnown RBP9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 FBXO40Q9UH90 709 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 KRBA1A5PL33 1030 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 TP73O15350 636 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 ASAP2O43150 1006 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 GNAI3P08754 354 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 ATF4P18848 351 aaPredicted RBP9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 CTNNA2P26232 953 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 KRT6CP48668 564 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 GDI2P50395 445 aaKnown RBP9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 SNAP47Q5SQN1 464 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 CYP26C1Q6V0L0 522 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 STXBP4Q6ZWJ1 553 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 GPR161Q8N6U8 529 aaKnown RBP9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 TIFAQ96CG3 184 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 NUSAP1Q9BXS6 441 aaKnown RBP9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 DLGAP2Q9P1A6 1054 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 TELO2Q9Y4R8 837 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 PTPRMP28827 1452 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 ZFYVE9O95405 1425 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 KRT86O43790 486 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 PENKP01210 267 aaPredicted RBP9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 KRT8P05787 483 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 BYSLQ13895 437 aaKnown RBP9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 PGBD3Q8N328 593 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 TBC1D19Q8N5T2 526 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 TTC13Q8NBP0 860 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 KCTD10Q9H3F6 313 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 C8orf33Q9H7E9 229 aaPredicted RBP9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 QTRT2Q9H974 415 aaKnown RBP9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 LY9Q9HBG7 655 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 SETBP1Q9Y6X0 1596 aa9.49□□□□□ -0.89
CTDSPL-201ENST00000273179 TYW5A2RUC4 315 aaKnown RBP9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 RAB19A4D1S5 217 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 SMCO2A6NFE2 343 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 SNPHO15079 494 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 PLSCR1O15162 318 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 CHEK2O96017 543 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 THEGLP0DJG4 465 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 UBL4AP11441 157 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 STMN1P16949 149 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 ETV5P41161 510 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 KCNJ6P48051 423 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 PPA1Q15181 289 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 SMU1Q2TAY7 513 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 ZNF792Q3KQV3 632 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 KCTD21Q4G0X4 260 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 C1orf141Q5JVX7 400 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 PLA2G4DQ86XP0 818 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 SSH1Q8WYL5 1049 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 FAM167AQ96KS9 214 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 KATNAL1Q9BW62 490 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 MRPL1Q9BYD6 325 aaKnown RBP9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 ELAC1Q9H777 363 aaKnown RBP9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 AGPAT3Q9NRZ7 376 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 ARHGEF28Q8N1W1 1705 aaKnown RBP9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 MAGEB16A2A368 324 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 IDUAP35475 653 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 ASMTP46597 345 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 ARID5AQ03989 594 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 ANGPT1Q15389 498 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 B3GNT6Q6ZMB0 384 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 EEPD1Q7L9B9 569 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 KDELC2Q7Z4H8 507 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 PALB2Q86YC2 1186 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 MIGA1Q8NAN2 632 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 KCND1Q9NSA2 647 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 C15orf41Q9Y2V0 281 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 A2ML1A8K2U0 1454 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 PRRT4C9JH25 899 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 TNFRSF10AO00220 468 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 BIRC5O15392 142 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 SYNCRIPO60506 623 aaKnown RBP9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 DKC1O60832 514 aaKnown RBP eCLIP9.48□□□□□ -0.892e-8■■■■■ 44.8
CTDSPL-201ENST00000273179 SMNDC1O75940 238 aaKnown RBP eCLIP9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 KLHL2O95198 593 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 ANP32DO95626 131 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 NPR1P16066 1061 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 WEE1P30291 646 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 TMPRSS15P98073 1019 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 CALCOCO2Q13137 446 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 SGO2Q562F6 1265 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 OR8H1Q8NGG4 311 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 SMG7Q92540 1137 aaKnown RBP9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 B3GALT6Q96L58 329 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 LPIN3Q9BQK8 851 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 NTN4Q9HB63 628 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 PLAAQ9Y263 795 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 A0A0G2JPF8 293 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 KRT87PA6NCN2 255 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 HNRNPCL3B7ZW38 293 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 TRDMT1O14717 391 aaKnown RBP9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 ZBTB14O43829 449 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 RPS6KA5O75582 802 aa9.48□□□□□ -0.89
CTDSPL-201ENST00000273179 HNRNPCL4P0DMR1 293 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms