RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 SKIP12755 728 aa17.09■□□□□ 0.33
SOD1-201ENST00000270142 GCFC2P16383 781 aaKnown RBP17.09■□□□□ 0.33
SOD1-201ENST00000270142 HOXB8P17481 243 aaPredicted RBP17.09■□□□□ 0.33
SOD1-201ENST00000270142 SP100P23497 879 aaPredicted RBP17.09■□□□□ 0.33
SOD1-201ENST00000270142 CA8P35219 290 aa17.09■□□□□ 0.33
SOD1-201ENST00000270142 NHLH1Q02575 133 aa17.09■□□□□ 0.33
SOD1-201ENST00000270142 BMP8AQ7Z5Y6 402 aa17.09■□□□□ 0.33
SOD1-201ENST00000270142 POTEDQ86YR6 584 aa17.09■□□□□ 0.33
SOD1-201ENST00000270142 BCL7CQ8WUZ0 217 aaPredicted RBP17.09■□□□□ 0.33
SOD1-201ENST00000270142 SLC7A3Q8WY07 619 aa17.09■□□□□ 0.33
SOD1-201ENST00000270142 RSPH1Q8WYR4 309 aa17.09■□□□□ 0.33
SOD1-201ENST00000270142 CEP170P1Q96L14 293 aa17.09■□□□□ 0.33
SOD1-201ENST00000270142 LXNQ9BS40 222 aa17.09■□□□□ 0.33
SOD1-201ENST00000270142 ZBP1Q9H171 429 aa17.09■□□□□ 0.33
SOD1-201ENST00000270142 DHX33Q9H6R0 707 aaKnown RBP17.09■□□□□ 0.33
SOD1-201ENST00000270142 BMP2KQ9NSY1 1161 aaPredicted RBP17.09■□□□□ 0.33
SOD1-201ENST00000270142 AGPAT5Q9NUQ2 364 aa17.09■□□□□ 0.33
SOD1-201ENST00000270142 TBC1D13Q9NVG8 400 aa17.09■□□□□ 0.33
SOD1-201ENST00000270142 INPP5FQ9Y2H2 1132 aa17.09■□□□□ 0.33
SOD1-201ENST00000270142 COL4A3BPQ9Y5P4 624 aa17.09■□□□□ 0.33
SOD1-201ENST00000270142 DKC1O60832 514 aaKnown RBP eCLIP17.08■□□□□ 0.32
SOD1-201ENST00000270142 ZNF623O75123 536 aa17.08■□□□□ 0.32
SOD1-201ENST00000270142 OFD1O75665 1012 aa17.08■□□□□ 0.32
SOD1-201ENST00000270142 XBP1P17861 261 aa17.08■□□□□ 0.32
SOD1-201ENST00000270142 RAB27AP51159 221 aa17.08■□□□□ 0.32
SOD1-201ENST00000270142 POLGP54098 1239 aaPredicted RBP17.08■□□□□ 0.32
SOD1-201ENST00000270142 EPHA7Q15375 998 aa17.08■□□□□ 0.32
SOD1-201ENST00000270142 NOMO2Q5JPE7 1267 aa17.08■□□□□ 0.32
SOD1-201ENST00000270142 NCAPH2Q6IBW4 605 aa17.08■□□□□ 0.32
SOD1-201ENST00000270142 GLB1LQ6UWU2 654 aa17.08■□□□□ 0.32
SOD1-201ENST00000270142 C4orf19Q8IY42 314 aa17.08■□□□□ 0.32
SOD1-201ENST00000270142 VPS52Q8N1B4 723 aa17.08■□□□□ 0.32
SOD1-201ENST00000270142 AUTS2Q8WXX7 1259 aa17.08■□□□□ 0.32
SOD1-201ENST00000270142 TMEM143Q96AN5 459 aa17.08■□□□□ 0.32
SOD1-201ENST00000270142 RGL1Q9NZL6 768 aa17.08■□□□□ 0.32
SOD1-201ENST00000270142 MUC6Q6W4X9 2439 aa17.07■□□□□ 0.32
SOD1-201ENST00000270142 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.07■□□□□ 0.32
SOD1-201ENST00000270142 FAM205CA6NFA0 338 aa17.07■□□□□ 0.32
SOD1-201ENST00000270142 TBX3O15119 743 aa17.07■□□□□ 0.32
SOD1-201ENST00000270142 B4GALT3O60512 393 aa17.07■□□□□ 0.32
SOD1-201ENST00000270142 CXCL14O95715 111 aa17.07■□□□□ 0.32
SOD1-201ENST00000270142 GALTP07902 379 aa17.07■□□□□ 0.32
SOD1-201ENST00000270142 YWHABP31946 246 aaKnown RBP17.07■□□□□ 0.32
SOD1-201ENST00000270142 SPIRE1Q08AE8 756 aa17.07■□□□□ 0.32
SOD1-201ENST00000270142 SIGLEC14Q08ET2 396 aa17.07■□□□□ 0.32
SOD1-201ENST00000270142 TPRNQ4KMQ1 711 aa17.07■□□□□ 0.32
SOD1-201ENST00000270142 PSPC1Q8WXF1 523 aaKnown RBP17.07■□□□□ 0.32
SOD1-201ENST00000270142 PBXIP1Q96AQ6 731 aa17.07■□□□□ 0.32
SOD1-201ENST00000270142 IGSF21Q96ID5 467 aa17.07■□□□□ 0.32
SOD1-201ENST00000270142 DYDC2Q96IM9 177 aa17.07■□□□□ 0.32
SOD1-201ENST00000270142 NAP1L4Q99733 375 aaKnown RBP17.07■□□□□ 0.32
SOD1-201ENST00000270142 MINDY3Q9H8M7 445 aa17.07■□□□□ 0.32
SOD1-201ENST00000270142 ORC3Q9UBD5 711 aaPredicted RBP17.07■□□□□ 0.32
SOD1-201ENST00000270142 DNAJB4Q9UDY4 337 aa17.07■□□□□ 0.32
SOD1-201ENST00000270142 PPME1Q9Y570 386 aa17.07■□□□□ 0.32
SOD1-201ENST00000270142 PCDHB2Q9Y5E7 798 aa17.07■□□□□ 0.32
SOD1-201ENST00000270142 MARCH6O60337 910 aa17.06■□□□□ 0.32
SOD1-201ENST00000270142 SRGAP2CP0DJJ0 459 aa17.06■□□□□ 0.32
SOD1-201ENST00000270142 CTSAP10619 480 aa17.06■□□□□ 0.32
SOD1-201ENST00000270142 RFC5P40937 340 aa17.06■□□□□ 0.32
SOD1-201ENST00000270142 SLC11A1P49279 550 aa17.06■□□□□ 0.32
SOD1-201ENST00000270142 AK2P54819 239 aa17.06■□□□□ 0.32
SOD1-201ENST00000270142 NR5A1Q13285 461 aa17.06■□□□□ 0.32
SOD1-201ENST00000270142 CTTNQ14247 550 aaKnown RBP17.06■□□□□ 0.32
SOD1-201ENST00000270142 BMS1Q14692 1282 aaKnown RBP17.06■□□□□ 0.32
SOD1-201ENST00000270142 PTPN21Q16825 1174 aa17.06■□□□□ 0.32
SOD1-201ENST00000270142 AGMOQ6ZNB7 445 aa17.06■□□□□ 0.32
SOD1-201ENST00000270142 SRGAP1Q7Z6B7 1085 aa17.06■□□□□ 0.32
SOD1-201ENST00000270142 DDX53Q86TM3 631 aaKnown RBP17.06■□□□□ 0.32
SOD1-201ENST00000270142 PRPF31Q8WWY3 499 aaKnown RBP17.06■□□□□ 0.32
SOD1-201ENST00000270142 PGBD4Q96DM1 585 aa17.06■□□□□ 0.32
SOD1-201ENST00000270142 GBP3Q9H0R5 595 aa17.06■□□□□ 0.32
SOD1-201ENST00000270142 ADAM7Q9H2U9 754 aa17.06■□□□□ 0.32
SOD1-201ENST00000270142 POMKQ9H5K3 350 aa17.06■□□□□ 0.32
SOD1-201ENST00000270142 ZNF318Q5VUA4 2279 aa17.06■□□□□ 0.32
SOD1-201ENST00000270142 WDFY4Q6ZS81 3184 aa17.06■□□□□ 0.32
SOD1-201ENST00000270142 ZBTB39O15060 712 aa17.05■□□□□ 0.32
SOD1-201ENST00000270142 LARGE1O95461 756 aa17.05■□□□□ 0.32
SOD1-201ENST00000270142 FDPSP14324 419 aaKnown RBP17.05■□□□□ 0.32
SOD1-201ENST00000270142 HOXA11P31270 313 aaPredicted RBP17.05■□□□□ 0.32
SOD1-201ENST00000270142 CYP4A11Q02928 519 aa17.05■□□□□ 0.32
SOD1-201ENST00000270142 RNASELQ05823 741 aaKnown RBP17.05■□□□□ 0.32
SOD1-201ENST00000270142 ITIH3Q06033 890 aa17.05■□□□□ 0.32
SOD1-201ENST00000270142 LAMTOR4Q0VGL1 99 aa17.05■□□□□ 0.32
SOD1-201ENST00000270142 EMC2Q15006 297 aa17.05■□□□□ 0.32
SOD1-201ENST00000270142 UBXN11Q5T124 520 aa17.05■□□□□ 0.32
SOD1-201ENST00000270142 IER5LQ5T953 404 aa17.05■□□□□ 0.32
SOD1-201ENST00000270142 ZNF280BQ86YH2 543 aa17.05■□□□□ 0.32
SOD1-201ENST00000270142 EXOC8Q8IYI6 725 aa17.05■□□□□ 0.32
SOD1-201ENST00000270142 PRSS33Q8NF86 280 aa17.05■□□□□ 0.32
SOD1-201ENST00000270142 TNFRSF25Q93038 417 aa17.05■□□□□ 0.32
SOD1-201ENST00000270142 ASIC4Q96FT7 647 aa17.05■□□□□ 0.32
SOD1-201ENST00000270142 VN1R3Q9BXE9 311 aa17.05■□□□□ 0.32
SOD1-201ENST00000270142 TSHZ2Q9NRE2 1034 aa17.05■□□□□ 0.32
SOD1-201ENST00000270142 IRAK3Q9Y616 596 aa17.05■□□□□ 0.32
SOD1-201ENST00000270142 CARNS1A5YM72 827 aa17.04■□□□□ 0.32
SOD1-201ENST00000270142 C2CD4DB7Z1M9 353 aa17.04■□□□□ 0.32
SOD1-201ENST00000270142 GAS2O43903 313 aaKnown RBP17.04■□□□□ 0.32
SOD1-201ENST00000270142 DDHD2O94830 711 aa17.04■□□□□ 0.32
SOD1-201ENST00000270142 WEE2P0C1S8 567 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms