RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 GGT7Q9UJ14 662 aa19.16■□□□□ 0.66
COL5A3-201ENST00000264828 RAD23BP54727 409 aa19.16■□□□□ 0.66
COL5A3-201ENST00000264828 GPS1Q13098 491 aa19.16■□□□□ 0.66
COL5A3-201ENST00000264828 MORF4L2Q15014 288 aa19.16■□□□□ 0.66
COL5A3-201ENST00000264828 ICE2Q659A1 982 aa19.16■□□□□ 0.66
COL5A3-201ENST00000264828 ZBED8Q8IZ13 594 aa19.16■□□□□ 0.66
COL5A3-201ENST00000264828 RNF103-CHMP3A0A140T963 221 aa19.16■□□□□ 0.66
COL5A3-201ENST00000264828 BRAFP15056 766 aa19.16■□□□□ 0.66
COL5A3-201ENST00000264828 HLA-DPA1P20036 260 aa19.16■□□□□ 0.66
COL5A3-201ENST00000264828 LIFRP42702 1097 aa19.16■□□□□ 0.66
COL5A3-201ENST00000264828 ARFIP2P53365 341 aa19.16■□□□□ 0.66
COL5A3-201ENST00000264828 SLFN12LQ6IEE8 588 aa19.16■□□□□ 0.66
COL5A3-201ENST00000264828 PI4KBQ9UBF8 816 aa19.16■□□□□ 0.66
COL5A3-201ENST00000264828 KCNH2Q12809 1159 aa19.16■□□□□ 0.66
COL5A3-201ENST00000264828 PDIA2Q13087 525 aaKnown RBP19.16■□□□□ 0.66
COL5A3-201ENST00000264828 MDH1BQ5I0G3 518 aa19.16■□□□□ 0.66
COL5A3-201ENST00000264828 PPP1R36Q96LQ0 422 aa19.16■□□□□ 0.66
COL5A3-201ENST00000264828 TMEM260Q9NX78 707 aa19.16■□□□□ 0.66
COL5A3-201ENST00000264828 MAN1A2O60476 641 aa19.15■□□□□ 0.66
COL5A3-201ENST00000264828 EFTUD2Q15029 972 aaKnown RBP eCLIP19.15■□□□□ 0.66
COL5A3-201ENST00000264828 CATSPER3Q86XQ3 398 aa19.15■□□□□ 0.66
COL5A3-201ENST00000264828 ASNSD1Q9NWL6 643 aa19.15■□□□□ 0.66
COL5A3-201ENST00000264828 MOSPD1Q9UJG1 213 aa19.15■□□□□ 0.66
COL5A3-201ENST00000264828 TRIM33Q9UPN9 1127 aa19.15■□□□□ 0.66
COL5A3-201ENST00000264828 NCAPD2Q15021 1401 aa19.15■□□□□ 0.66
COL5A3-201ENST00000264828 UBE4BO95155 1302 aa19.15■□□□□ 0.66
COL5A3-201ENST00000264828 SLC16A4O15374 487 aa19.15■□□□□ 0.66
COL5A3-201ENST00000264828 ZNF699Q32M78 642 aa19.15■□□□□ 0.66
COL5A3-201ENST00000264828 RNF135Q8IUD6 432 aa19.15■□□□□ 0.66
COL5A3-201ENST00000264828 STOML1Q9UBI4 398 aa19.15■□□□□ 0.66
COL5A3-201ENST00000264828 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.15■□□□□ 0.66
COL5A3-201ENST00000264828 TMEM247A6NEH6 219 aa19.15■□□□□ 0.66
COL5A3-201ENST00000264828 DHX40Q8IX18 779 aaKnown RBP19.15■□□□□ 0.66
COL5A3-201ENST00000264828 ETNK1Q9HBU6 452 aa19.15■□□□□ 0.66
COL5A3-201ENST00000264828 SH3GLB2Q9NR46 395 aa19.15■□□□□ 0.66
COL5A3-201ENST00000264828 ABCB11O95342 1321 aa19.15■□□□□ 0.66
COL5A3-201ENST00000264828 MIF4GDA9UHW6 222 aaKnown RBP19.15■□□□□ 0.66
COL5A3-201ENST00000264828 NMT2O60551 498 aa19.15■□□□□ 0.66
COL5A3-201ENST00000264828 ZC3H12BQ5HYM0 836 aaKnown RBP19.15■□□□□ 0.66
COL5A3-201ENST00000264828 SLC26A7Q8TE54 656 aa19.15■□□□□ 0.66
COL5A3-201ENST00000264828 ALG13Q9NP73 1137 aaKnown RBP19.15■□□□□ 0.66
COL5A3-201ENST00000264828 MCAMP43121 646 aa19.15■□□□□ 0.66
COL5A3-201ENST00000264828 ZNF341Q9BYN7 854 aa19.15■□□□□ 0.66
COL5A3-201ENST00000264828 KRT39Q6A163 491 aa19.14■□□□□ 0.66
COL5A3-201ENST00000264828 MMTAG2Q9BU76 263 aaKnown RBP19.14■□□□□ 0.66
COL5A3-201ENST00000264828 LAMC1P11047 1609 aa19.14■□□□□ 0.65
COL5A3-201ENST00000264828 CFAP69A5D8W1 941 aa19.14■□□□□ 0.65
COL5A3-201ENST00000264828 PPARGP37231 505 aaPredicted RBP19.14■□□□□ 0.65
COL5A3-201ENST00000264828 AP1B1Q10567 949 aa19.14■□□□□ 0.65
COL5A3-201ENST00000264828 RBBP7Q16576 425 aa19.14■□□□□ 0.65
COL5A3-201ENST00000264828 TBC1D9BQ66K14 1250 aa19.14■□□□□ 0.65
COL5A3-201ENST00000264828 ICA1LQ8NDH6 482 aa19.14■□□□□ 0.65
COL5A3-201ENST00000264828 ATF5Q9Y2D1 282 aaPredicted RBP19.14■□□□□ 0.65
COL5A3-201ENST00000264828 ATP1A1P05023 1023 aaKnown RBP19.14■□□□□ 0.65
COL5A3-201ENST00000264828 LBRQ14739 615 aaKnown RBP19.14■□□□□ 0.65
COL5A3-201ENST00000264828 TEX33O43247 280 aa19.14■□□□□ 0.65
COL5A3-201ENST00000264828 FGFR4P22455 802 aa19.14■□□□□ 0.65
COL5A3-201ENST00000264828 C1orf54Q8WWF1 131 aa19.14■□□□□ 0.65
COL5A3-201ENST00000264828 NR1H4Q96RI1 486 aaPredicted RBP19.14■□□□□ 0.65
COL5A3-201ENST00000264828 ARHGAP31Q2M1Z3 1444 aa19.14■□□□□ 0.65
COL5A3-201ENST00000264828 MXD4Q14582 209 aaPredicted RBP19.14■□□□□ 0.65
COL5A3-201ENST00000264828 CCDC85BQ15834 202 aaPredicted RBP19.14■□□□□ 0.65
COL5A3-201ENST00000264828 ATXN7L3BQ96GX2 97 aa19.14■□□□□ 0.65
COL5A3-201ENST00000264828 NDE1Q9NXR1 346 aa19.14■□□□□ 0.65
COL5A3-201ENST00000264828 STX18Q9P2W9 335 aaKnown RBP19.14■□□□□ 0.65
COL5A3-201ENST00000264828 M0QYV0 167 aa19.13■□□□□ 0.65
COL5A3-201ENST00000264828 MYL3P08590 195 aa19.13■□□□□ 0.65
COL5A3-201ENST00000264828 NCAPHQ15003 741 aa19.13■□□□□ 0.65
COL5A3-201ENST00000264828 INTS2Q9H0H0 1204 aaKnown RBP19.13■□□□□ 0.65
COL5A3-201ENST00000264828 DHX36Q9H2U1 1008 aaKnown RBP19.13■□□□□ 0.65
COL5A3-201ENST00000264828 ATP6V0A4Q9HBG4 840 aa19.13■□□□□ 0.65
COL5A3-201ENST00000264828 UNC13BO14795 1591 aa19.13■□□□□ 0.65
COL5A3-201ENST00000264828 CACNB3P54284 484 aa19.13■□□□□ 0.65
COL5A3-201ENST00000264828 DALRD3Q5D0E6 543 aaKnown RBP19.13■□□□□ 0.65
COL5A3-201ENST00000264828 PRPF38AQ8NAV1 312 aaKnown RBP19.13■□□□□ 0.65
COL5A3-201ENST00000264828 KRT14P02533 472 aa19.13■□□□□ 0.65
COL5A3-201ENST00000264828 PRELPP51888 382 aa19.13■□□□□ 0.65
COL5A3-201ENST00000264828 C1orf228Q6PIY5 440 aa19.13■□□□□ 0.65
COL5A3-201ENST00000264828 SCG3Q8WXD2 468 aaKnown RBP19.13■□□□□ 0.65
COL5A3-201ENST00000264828 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.13■□□□□ 0.65
COL5A3-201ENST00000264828 BSDC1Q9NW68 430 aaPredicted RBP19.13■□□□□ 0.65
COL5A3-201ENST00000264828 GUCY1A3Q02108 690 aa19.13■□□□□ 0.65
COL5A3-201ENST00000264828 POTEB3A0JP26 581 aa19.13■□□□□ 0.65
COL5A3-201ENST00000264828 POTECB2RU33 542 aa19.13■□□□□ 0.65
COL5A3-201ENST00000264828 LDHAP00338 332 aaKnown RBP19.13■□□□□ 0.65
COL5A3-201ENST00000264828 MTMR1Q13613 665 aa19.13■□□□□ 0.65
COL5A3-201ENST00000264828 TBCCQ15814 346 aa19.13■□□□□ 0.65
COL5A3-201ENST00000264828 POTEBQ6S5H4 581 aa19.13■□□□□ 0.65
COL5A3-201ENST00000264828 TTC8Q8TAM2 541 aa19.13■□□□□ 0.65
COL5A3-201ENST00000264828 ATP6V1G3Q96LB4 118 aa19.13■□□□□ 0.65
COL5A3-201ENST00000264828 SLC8A2Q9UPR5 921 aa19.13■□□□□ 0.65
COL5A3-201ENST00000264828 A2ML1A8K2U0 1454 aa19.13■□□□□ 0.65
COL5A3-201ENST00000264828 SEC24DO94855 1032 aaPredicted RBP19.12■□□□□ 0.65
COL5A3-201ENST00000264828 RANBP1P43487 201 aa19.12■□□□□ 0.65
COL5A3-201ENST00000264828 CAV1Q03135 178 aa19.12■□□□□ 0.65
COL5A3-201ENST00000264828 NR1H3Q13133 447 aa19.12■□□□□ 0.65
COL5A3-201ENST00000264828 LRRC8EQ6NSJ5 796 aa19.12■□□□□ 0.65
COL5A3-201ENST00000264828 CATSPER4Q7RTX7 472 aa19.12■□□□□ 0.65
COL5A3-201ENST00000264828 TMEM35BQ8NCS4 154 aa19.12■□□□□ 0.65
COL5A3-201ENST00000264828 NAF1Q96HR8 494 aaKnown RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms