RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 FMO2Q99518 471 aa13.53□□□□□ -0.24
HERC6-201ENST00000264346 MPHOSPH6Q99547 160 aaKnown RBP13.53□□□□□ -0.24
HERC6-201ENST00000264346 C11orf70Q9BRQ4 267 aa13.53□□□□□ -0.24
HERC6-201ENST00000264346 KCND1Q9NSA2 647 aa13.53□□□□□ -0.24
HERC6-201ENST00000264346 ROBO1Q9Y6N7 1651 aa13.53□□□□□ -0.24
HERC6-201ENST00000264346 ACSL3O95573 720 aa13.53□□□□□ -0.24
HERC6-201ENST00000264346 NAB2Q15742 525 aa13.53□□□□□ -0.24
HERC6-201ENST00000264346 SGO2Q562F6 1265 aa13.53□□□□□ -0.24
HERC6-201ENST00000264346 STYK1Q6J9G0 422 aa13.53□□□□□ -0.24
HERC6-201ENST00000264346 C15orf52Q6ZUT6 534 aaKnown RBP13.53□□□□□ -0.24
HERC6-201ENST00000264346 CCDC77Q9BR77 488 aa13.53□□□□□ -0.24
HERC6-201ENST00000264346 RNF14Q9UBS8 474 aa13.53□□□□□ -0.24
HERC6-201ENST00000264346 APEX2Q9UBZ4 518 aa13.53□□□□□ -0.24
HERC6-201ENST00000264346 ZNF148Q9UQR1 794 aa13.53□□□□□ -0.24
HERC6-201ENST00000264346 TMX2Q9Y320 296 aa13.53□□□□□ -0.24
HERC6-201ENST00000264346 COL18A1P39060 1754 aa13.53□□□□□ -0.24
HERC6-201ENST00000264346 ZNF233A6NK53 670 aa13.53□□□□□ -0.24
HERC6-201ENST00000264346 TMEM191BP0C7N4 346 aa13.53□□□□□ -0.24
HERC6-201ENST00000264346 NR1D1P20393 614 aa13.53□□□□□ -0.24
HERC6-201ENST00000264346 MAGEA9P43362 315 aa13.53□□□□□ -0.24
HERC6-201ENST00000264346 IFT88Q13099 833 aa13.53□□□□□ -0.24
HERC6-201ENST00000264346 PAPD7Q5XG87 772 aaKnown RBP13.53□□□□□ -0.24
HERC6-201ENST00000264346 GMCL1Q96IK5 515 aa13.53□□□□□ -0.24
HERC6-201ENST00000264346 PDGFDQ9GZP0 370 aaPredicted RBP13.53□□□□□ -0.24
HERC6-201ENST00000264346 MLXIPLQ9NP71 852 aa13.53□□□□□ -0.24
HERC6-201ENST00000264346 TBC1D22BQ9NU19 505 aa13.53□□□□□ -0.24
HERC6-201ENST00000264346 NR3C2P08235 984 aa13.52□□□□□ -0.24
HERC6-201ENST00000264346 MYBL2P10244 700 aa13.52□□□□□ -0.24
HERC6-201ENST00000264346 KCNJ1P48048 391 aa13.52□□□□□ -0.24
HERC6-201ENST00000264346 PSMC5P62195 406 aa13.52□□□□□ -0.24
HERC6-201ENST00000264346 GUCY1A3Q02108 690 aa13.52□□□□□ -0.24
HERC6-201ENST00000264346 ARSHQ5FYA8 562 aa13.52□□□□□ -0.24
HERC6-201ENST00000264346 NBPF12Q5TAG4 269 aaPredicted RBP13.52□□□□□ -0.24
HERC6-201ENST00000264346 ANGEL2Q5VTE6 544 aaKnown RBP13.52□□□□□ -0.24
HERC6-201ENST00000264346 TMEM270Q6UE05 265 aa13.52□□□□□ -0.24
HERC6-201ENST00000264346 CBWD2Q8IUF1 395 aa13.52□□□□□ -0.24
HERC6-201ENST00000264346 KIRREL3Q8IZU9 778 aa13.52□□□□□ -0.24
HERC6-201ENST00000264346 TLR10Q9BXR5 811 aa13.52□□□□□ -0.24
HERC6-201ENST00000264346 NID2Q14112 1375 aa13.52□□□□□ -0.25
HERC6-201ENST00000264346 GAS8O95995 478 aa13.52□□□□□ -0.25
HERC6-201ENST00000264346 GMPSP49915 693 aaPredicted RBP13.52□□□□□ -0.25
HERC6-201ENST00000264346 SLC12A3P55017 1021 aa13.52□□□□□ -0.25
HERC6-201ENST00000264346 C10orf76Q5T2E6 689 aa13.52□□□□□ -0.25
HERC6-201ENST00000264346 RNPC3Q96LT9 517 aaKnown RBP13.52□□□□□ -0.25
HERC6-201ENST00000264346 MSTO1Q9BUK6 570 aa13.52□□□□□ -0.25
HERC6-201ENST00000264346 ADAM33Q9BZ11 813 aa13.52□□□□□ -0.25
HERC6-201ENST00000264346 THAP2Q9H0W7 228 aa13.52□□□□□ -0.25
HERC6-201ENST00000264346 MYH14Q7Z406 1995 aaKnown RBP13.52□□□□□ -0.25
HERC6-201ENST00000264346 MYH6P13533 1939 aa13.52□□□□□ -0.25
HERC6-201ENST00000264346 PSAPP07602 524 aa13.52□□□□□ -0.25
HERC6-201ENST00000264346 HDLBPQ00341 1268 aaKnown RBP13.52□□□□□ -0.25
HERC6-201ENST00000264346 MEA1Q16626 185 aa13.52□□□□□ -0.25
HERC6-201ENST00000264346 FIGNQ5HY92 759 aa13.52□□□□□ -0.25
HERC6-201ENST00000264346 OTOP1Q7RTM1 612 aa13.52□□□□□ -0.25
HERC6-201ENST00000264346 MSANTD4Q8NCY6 345 aa13.52□□□□□ -0.25
HERC6-201ENST00000264346 C1orf54Q8WWF1 131 aa13.52□□□□□ -0.25
HERC6-201ENST00000264346 WDR18Q9BV38 432 aa13.52□□□□□ -0.25
HERC6-201ENST00000264346 IDI2Q9BXS1 227 aa13.52□□□□□ -0.25
HERC6-201ENST00000264346 TOPORSQ9NS56 1045 aaPredicted RBP13.52□□□□□ -0.25
HERC6-201ENST00000264346 SEL1LQ9UBV2 794 aa13.52□□□□□ -0.25
HERC6-201ENST00000264346 PCDHA10Q9Y5I2 948 aa13.52□□□□□ -0.25
HERC6-201ENST00000264346 IKBKGQ9Y6K9 419 aa13.52□□□□□ -0.25
HERC6-201ENST00000264346 CAPN7Q9Y6W3 813 aa13.52□□□□□ -0.25
HERC6-201ENST00000264346 BCL9LQ86UU0 1499 aa13.51□□□□□ -0.25
HERC6-201ENST00000264346 AKAP11Q9UKA4 1901 aa13.51□□□□□ -0.25
HERC6-201ENST00000264346 LAMA4Q16363 1823 aa13.51□□□□□ -0.25
HERC6-201ENST00000264346 GLI1P08151 1106 aa13.51□□□□□ -0.25
HERC6-201ENST00000264346 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.51□□□□□ -0.25
HERC6-201ENST00000264346 NSUN6Q8TEA1 469 aaKnown RBP13.51□□□□□ -0.25
HERC6-201ENST00000264346 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.51□□□□□ -0.25
HERC6-201ENST00000264346 NUP85Q9BW27 656 aa13.51□□□□□ -0.25
HERC6-201ENST00000264346 KLHL11Q9NVR0 708 aa13.51□□□□□ -0.25
HERC6-201ENST00000264346 FBXL5Q9UKA1 691 aa13.51□□□□□ -0.25
HERC6-201ENST00000264346 COL14A1Q05707 1796 aaKnown RBP13.51□□□□□ -0.25
HERC6-201ENST00000264346 CALCAP01258 141 aa13.51□□□□□ -0.25
HERC6-201ENST00000264346 GPC5P78333 572 aa13.51□□□□□ -0.25
HERC6-201ENST00000264346 MTM1Q13496 603 aa13.51□□□□□ -0.25
HERC6-201ENST00000264346 MTMR3Q13615 1198 aa13.51□□□□□ -0.25
HERC6-201ENST00000264346 SCYL2Q6P3W7 929 aa13.51□□□□□ -0.25
HERC6-201ENST00000264346 CCDC91Q7Z6B0 441 aa13.51□□□□□ -0.25
HERC6-201ENST00000264346 SLC20A1Q8WUM9 679 aa13.51□□□□□ -0.25
HERC6-201ENST00000264346 RFFLQ8WZ73 363 aa13.51□□□□□ -0.25
HERC6-201ENST00000264346 AGPAT1Q99943 283 aa13.51□□□□□ -0.25
HERC6-201ENST00000264346 STK33Q9BYT3 514 aa13.51□□□□□ -0.25
HERC6-201ENST00000264346 MYH10P35580 1976 aa13.51□□□□□ -0.25
HERC6-201ENST00000264346 WNT10BO00744 389 aa13.51□□□□□ -0.25
HERC6-201ENST00000264346 ITGA4P13612 1032 aa13.51□□□□□ -0.25
HERC6-201ENST00000264346 DESP17661 470 aa13.51□□□□□ -0.25
HERC6-201ENST00000264346 LACTBP83111 547 aaPredicted RBP13.51□□□□□ -0.25
HERC6-201ENST00000264346 ZKSCAN8Q15776 578 aaPredicted RBP13.51□□□□□ -0.25
HERC6-201ENST00000264346 SNRNP35Q16560 246 aaKnown RBP13.51□□□□□ -0.25
HERC6-201ENST00000264346 MIS18BP1Q6P0N0 1132 aa13.51□□□□□ -0.25
HERC6-201ENST00000264346 CPA5Q8WXQ8 436 aa13.51□□□□□ -0.25
HERC6-201ENST00000264346 RNF25Q96BH1 459 aaPredicted RBP13.51□□□□□ -0.25
HERC6-201ENST00000264346 NCAPGQ9BPX3 1015 aa13.51□□□□□ -0.25
HERC6-201ENST00000264346 POLR3CQ9BUI4 534 aaPredicted RBP13.51□□□□□ -0.25
HERC6-201ENST00000264346 APOL6Q9BWW8 343 aa13.51□□□□□ -0.25
HERC6-201ENST00000264346 POLR3FQ9H1D9 316 aaPredicted RBP13.51□□□□□ -0.25
HERC6-201ENST00000264346 VPS37BQ9H9H4 285 aa13.51□□□□□ -0.25
HERC6-201ENST00000264346 M0R2N6 131 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms