RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 RNF149Q8NC42 400 aa10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 ENOX1Q8TC92 643 aaKnown RBP10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 SPIRE2Q8WWL2 714 aa10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 WNT8BQ93098 351 aa10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 JPH2Q9BR39 696 aaPredicted RBP10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 NTPCRQ9BSD7 190 aaKnown RBP10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 TSEN34Q9BSV6 310 aaKnown RBP10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 CDHR5Q9HBB8 845 aa10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 SAMSN1Q9NSI8 373 aaKnown RBP10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 GTF2IRD1Q9UHL9 959 aa10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 PCDHB13Q9Y5F0 798 aa10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 A0A087WZ62 844 aa10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 TTLL13PA6NNM8 815 aa10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 CLIC2O15247 247 aa10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 TGFB1I1O43294 461 aa10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 AP5Z1O43299 807 aa10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 GAS2O43903 313 aaKnown RBP10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 TFRCP02786 760 aaKnown RBP10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 MAPTP10636 758 aaKnown RBP10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 ATP1A3P13637 1013 aa10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 TMOD1P28289 359 aa10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 NAMPTP43490 491 aa10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 NLRP11P59045 1033 aaKnown RBP10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 GTF2BQ00403 316 aa10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 PKN2Q16513 984 aaKnown RBP10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 KNOP1Q1ED39 458 aaKnown RBP10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 BMT2Q1RMZ1 405 aa10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 KIZQ2M2Z5 673 aa10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 DEPTORQ8TB45 409 aa10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 U2AF1L4Q8WU68 220 aaKnown RBP10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 ARMC5Q96C12 935 aa10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 GLT1D1Q96MS3 346 aa10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 CTAGE1Q96RT6 745 aa10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 FDXACB1Q9BRP7 624 aaPredicted RBP10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 SRRTQ9BXP5 876 aaKnown RBP10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 GTPBP4Q9BZE4 634 aaKnown RBP10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 MINDY3Q9H8M7 445 aa10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 C17orf75Q9HAS0 396 aa10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 GRPEL1Q9HAV7 217 aa10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 TRMT13Q9NUP7 481 aaKnown RBP10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 ARHGAP28Q9P2N2 729 aa10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 OGDHLQ9ULD0 1010 aa10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 TBX20Q9UMR3 447 aa10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 PHF24Q9UPV7 400 aa10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 GINS2Q9Y248 185 aa10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 NFE2L3Q9Y4A8 694 aa10.71□□□□□ -0.69
SNRNP40-201ENST00000263694 SMIM35A0A1B0GVV1 85 aa10.7□□□□□ -0.7
SNRNP40-201ENST00000263694 MOXD2PA6NHM9 499 aa10.7□□□□□ -0.7
SNRNP40-201ENST00000263694 SMTNL1A8MU46 457 aa10.7□□□□□ -0.7
SNRNP40-201ENST00000263694 ANKRD63C9JTQ0 380 aa10.7□□□□□ -0.7
SNRNP40-201ENST00000263694 IKBKBO14920 756 aa10.7□□□□□ -0.7
SNRNP40-201ENST00000263694 EIF3DO15371 548 aaKnown RBP eCLIP10.7□□□□□ -0.7
SNRNP40-201ENST00000263694 SGPL1O95470 568 aa10.7□□□□□ -0.7
SNRNP40-201ENST00000263694 CAVIN2O95810 425 aa10.7□□□□□ -0.7
SNRNP40-201ENST00000263694 PLCB2Q00722 1185 aa10.7□□□□□ -0.7
SNRNP40-201ENST00000263694 MXD4Q14582 209 aaPredicted RBP10.7□□□□□ -0.7
SNRNP40-201ENST00000263694 PPP2R5AQ15172 486 aa10.7□□□□□ -0.7
SNRNP40-201ENST00000263694 TPD52L1Q16890 204 aaPredicted RBP10.7□□□□□ -0.7
SNRNP40-201ENST00000263694 ZCWPW2Q504Y3 356 aa10.7□□□□□ -0.7
SNRNP40-201ENST00000263694 SPATA1Q5VX52 437 aa10.7□□□□□ -0.7
SNRNP40-201ENST00000263694 SYCP3Q8IZU3 236 aa10.7□□□□□ -0.7
SNRNP40-201ENST00000263694 ACCSQ96QU6 501 aa10.7□□□□□ -0.7
SNRNP40-201ENST00000263694 MAP7D2Q96T17 732 aa10.7□□□□□ -0.7
SNRNP40-201ENST00000263694 MCOLN1Q9GZU1 580 aa10.7□□□□□ -0.7
SNRNP40-201ENST00000263694 TRPV6Q9H1D0 765 aa10.7□□□□□ -0.7
SNRNP40-201ENST00000263694 ST6GALNAC4Q9H4F1 302 aa10.7□□□□□ -0.7
SNRNP40-201ENST00000263694 IFT122Q9HBG6 1241 aa10.7□□□□□ -0.7
SNRNP40-201ENST00000263694 STARD7Q9NQZ5 370 aa10.7□□□□□ -0.7
SNRNP40-201ENST00000263694 SIP14410 1827 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 GOLGA6L19H0YKK7 550 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 K7ERI5 159 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 DNM1LO00429 736 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 CABYRO75952 493 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 IQCF3P0C7M6 154 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 GNAT1P11488 350 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 FGFR4P22455 802 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 GPC3P51654 580 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 PTGISQ16647 500 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 CT47A1Q5JQC4 288 aaPredicted RBP10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 SLC39A4Q6P5W5 647 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 IRF2BP1Q8IU81 584 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 CREBRFQ8IUR6 639 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 CSGALNACT2Q8N6G5 542 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 ZSWIM2Q8NEG5 633 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 DIS3LQ8TF46 1054 aaKnown RBP10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 NLRP7Q8WX94 980 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 SENP6Q9GZR1 1112 aaPredicted RBP10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 ADAMTS10Q9H324 1103 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 PCIF1Q9H4Z3 704 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 BICDL2A1A5D9 508 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 INO80B-WBP1J3KQ70 363 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 PDXKO00764 312 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 ASAP2O43150 1006 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 GPR32O75388 356 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 KIF20AO95235 890 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 PPP1R2P41236 205 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 PTENP60484 403 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 TFDP1Q14186 410 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 CDCA2Q69YH5 1023 aaPredicted RBP10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 STXBP4Q6ZWJ1 553 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms