RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 RPUSD2Q8IZ73 545 aaKnown RBP9.87□□□□□ -0.83
MSH4-201ENST00000263187 EPS8L3Q8TE67 593 aaKnown RBP9.87□□□□□ -0.83
MSH4-201ENST00000263187 HES6Q96HZ4 224 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 ZNF577Q9BSK1 485 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 GPR88Q9GZN0 384 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 TMX4Q9H1E5 349 aaPredicted RBP9.87□□□□□ -0.83
MSH4-201ENST00000263187 SUCLA2Q9P2R7 463 aaPredicted RBP9.87□□□□□ -0.83
MSH4-201ENST00000263187 CD2APQ9Y5K6 639 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 DDX3YO15523 660 aaKnown RBP9.87□□□□□ -0.83
MSH4-201ENST00000263187 HIP1RO75146 1068 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 ZBTB48P10074 688 aaPredicted RBP9.87□□□□□ -0.83
MSH4-201ENST00000263187 FNTAP49354 379 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 E2F5Q15329 346 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 RBM26Q5T8P6 1007 aaKnown RBP9.87□□□□□ -0.83
MSH4-201ENST00000263187 LLGL2Q6P1M3 1020 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 C1orf186Q6ZWK4 172 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 ZDHHC14Q8IZN3 488 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 CPXCR1Q8N123 301 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 PPM1KQ8N3J5 372 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 ATP8B4Q8TF62 1192 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 RFFLQ8WZ73 363 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 SEC16BQ96JE7 1060 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 PWWP2AQ96N64 755 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 LXNQ9BS40 222 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 OSBPL7Q9BZF2 842 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 UNC45AQ9H3U1 944 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 SLC12A6Q9UHW9 1150 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 SGPL1O95470 568 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 PRKCIP41743 596 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 SOX10P56693 466 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 MAP2K1Q02750 393 aaPredicted RBP9.87□□□□□ -0.83
MSH4-201ENST00000263187 PPP3CAQ08209 521 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 AP3B2Q13367 1082 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 Q4G0T1 1027 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 C10orf76Q5T2E6 689 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 RUFY4Q6ZNE9 571 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 ZNF720Q7Z2F6 126 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 CD302Q8IX05 232 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 SYCE1Q8N0S2 351 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 DCAF4Q8WV16 495 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 CRYGNQ8WXF5 182 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 SAAL1Q96ER3 474 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 PRMT6Q96LA8 375 aaPredicted RBP9.87□□□□□ -0.83
MSH4-201ENST00000263187 CCDC17Q96LX7 622 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 HSD17B14Q9BPX1 270 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 STK33Q9BYT3 514 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 GLIS2Q9BZE0 524 aaPredicted RBP9.87□□□□□ -0.83
MSH4-201ENST00000263187 APEX2Q9UBZ4 518 aa9.87□□□□□ -0.83
MSH4-201ENST00000263187 LOC102724159A0A0B4J2E5 919 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 ARHGEF35A5YM69 484 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 CYP26A1O43174 497 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 CHN1P15882 459 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 SP4Q02446 784 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 PWP2Q15269 919 aaKnown RBP9.86□□□□□ -0.83
MSH4-201ENST00000263187 AOC3Q16853 763 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 MCTP2Q6DN12 878 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 TTC27Q6P3X3 843 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 MICALCLQ6ZW33 695 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 JAMLQ86YT9 394 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 ZC3H3Q8IXZ2 948 aaKnown RBP9.86□□□□□ -0.83
MSH4-201ENST00000263187 CCDC105Q8IYK2 499 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 OLIG1Q8TAK6 271 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 C1orf54Q8WWF1 131 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 RNF25Q96BH1 459 aaPredicted RBP9.86□□□□□ -0.83
MSH4-201ENST00000263187 BORCS6Q96GS4 357 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 FAM20AQ96MK3 541 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 PSMD1Q99460 953 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 ADAM33Q9BZ11 813 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 IGLV3-22A0A075B6J6 115 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 TRAPPC3O43617 180 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 ACSL3O95573 720 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 CPP00450 1065 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 VIMP08670 466 aaKnown RBP9.86□□□□□ -0.83
MSH4-201ENST00000263187 LMNB1P20700 586 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 COMTP21964 271 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 GJC1P36383 396 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 FAM133BQ5BKY9 247 aaKnown RBP9.86□□□□□ -0.83
MSH4-201ENST00000263187 SLC27A3Q5K4L6 730 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 SLFN11Q7Z7L1 901 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 SLC47A2Q86VL8 602 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 ARFGAP2Q8N6H7 521 aa9.86□□□□□ -0.83
MSH4-201ENST00000263187 DHX38Q92620 1227 aaKnown RBP9.86□□□□□ -0.83
MSH4-201ENST00000263187 NAP1L4Q99733 375 aaKnown RBP9.86□□□□□ -0.83
MSH4-201ENST00000263187 GOLGA6L10A0A0M3HER8 536 aa9.85□□□□□ -0.83
MSH4-201ENST00000263187 CCDC188H7C350 402 aa9.85□□□□□ -0.83
MSH4-201ENST00000263187 SPOPO43791 374 aa9.85□□□□□ -0.83
MSH4-201ENST00000263187 DLATP10515 647 aaKnown RBP9.85□□□□□ -0.83
MSH4-201ENST00000263187 PYGMP11217 842 aa9.85□□□□□ -0.83
MSH4-201ENST00000263187 CREB1P16220 341 aa9.85□□□□□ -0.83
MSH4-201ENST00000263187 CHRNA5P30532 468 aa9.85□□□□□ -0.83
MSH4-201ENST00000263187 RPL21P46778 160 aaKnown RBP9.85□□□□□ -0.83
MSH4-201ENST00000263187 PMS2P54278 862 aa9.85□□□□□ -0.83
MSH4-201ENST00000263187 GRIPAP1Q4V328 841 aa9.85□□□□□ -0.83
MSH4-201ENST00000263187 SEPT14Q6ZU15 432 aa9.85□□□□□ -0.83
MSH4-201ENST00000263187 CRAMP1Q96RY5 1269 aa9.85□□□□□ -0.83
MSH4-201ENST00000263187 PRMT1Q99873 361 aaKnown RBP9.85□□□□□ -0.83
MSH4-201ENST00000263187 AGPAT1Q99943 283 aa9.85□□□□□ -0.83
MSH4-201ENST00000263187 ERP44Q9BS26 406 aa9.85□□□□□ -0.83
MSH4-201ENST00000263187 VEZTQ9HBM0 779 aa9.85□□□□□ -0.83
MSH4-201ENST00000263187 SLC40A1Q9NP59 571 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms