RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 ABCB11O95342 1321 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 PNMA6FA0A0J9YX94 578 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 CCDC78A2IDD5 438 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 APBA3O96018 575 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 COPB2P35606 906 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 IZUMO3Q5VZ72 239 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 ARL6IP4Q66PJ3 421 aaKnown RBP12.85□□□□□ -0.35
SMG6-201ENST00000263073 C4orf33Q8N1A6 199 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 CHORDC1Q9UHD1 332 aaPredicted RBP12.85□□□□□ -0.35
SMG6-201ENST00000263073 PLEKHG3A1L390 1219 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 SEMA3EO15041 775 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 PCYT1AP49585 367 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 INTS2Q9H0H0 1204 aaKnown RBP12.85□□□□□ -0.35
SMG6-201ENST00000263073 UBE3AQ05086 875 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 LRRC8EQ6NSJ5 796 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 SPATA21Q7Z572 469 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 ENAHQ8N8S7 591 aaPredicted RBP12.85□□□□□ -0.35
SMG6-201ENST00000263073 PCDHA6Q9UN73 950 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 AURKCQ9UQB9 309 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 PCDHA8Q9Y5H6 950 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 LOC102724428A0A0B4J2F2 783 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 LTKP29376 864 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 CCND2P30279 289 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 PGM1P36871 562 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 SIK1P57059 783 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 DEUP1Q05D60 604 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 IPO5O00410 1097 aaKnown RBP12.84□□□□□ -0.35
SMG6-201ENST00000263073 EIF3HO15372 352 aaKnown RBP eCLIP12.84□□□□□ -0.353e-7■■■■□ 19.3
SMG6-201ENST00000263073 PPP1R37O75864 691 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 XDHP47989 1333 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 HLFQ16534 295 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 ANKRD7Q92527 254 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 RBM12Q9NTZ6 932 aaKnown RBP12.84□□□□□ -0.35
SMG6-201ENST00000263073 TDP2O95551 362 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 KLC3Q6P597 504 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 ACAD11Q709F0 780 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 RFWD2Q8NHY2 731 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 SLC30A5Q8TAD4 765 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 MDM1Q8TC05 714 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 PSPC1Q8WXF1 523 aaKnown RBP12.84□□□□□ -0.35
SMG6-201ENST00000263073 DACH2Q96NX9 599 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 SH2D3AQ9BRG2 576 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 USP17L10C9JJH3 530 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 FXR1P51114 621 aaKnown RBP eCLIP12.84□□□□□ -0.35
SMG6-201ENST00000263073 TAF1BQ53T94 588 aaPredicted RBP12.84□□□□□ -0.35
SMG6-201ENST00000263073 PDXDC2PQ6P474 469 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 STAG2Q8N3U4 1231 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 PDCD6IPQ8WUM4 868 aaKnown RBP12.84□□□□□ -0.35
SMG6-201ENST00000263073 SNF8Q96H20 258 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 PALMDQ9NP74 551 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 UGGT1Q9NYU2 1555 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 ZNF233A6NK53 670 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 ZSCAN20P17040 1043 aaPredicted RBP12.84□□□□□ -0.35
SMG6-201ENST00000263073 TCN1P20061 433 aaPredicted RBP12.84□□□□□ -0.35
SMG6-201ENST00000263073 AP1B1Q10567 949 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 PFKFB3Q16875 520 aaPredicted RBP12.84□□□□□ -0.35
SMG6-201ENST00000263073 NBPF10Q6P3W6 841 aaKnown RBP12.84□□□□□ -0.35
SMG6-201ENST00000263073 STOX1Q6ZVD7 989 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 ZNF710Q8N1W2 664 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 MTRQ99707 1265 aa12.84□□□□□ -0.35
SMG6-201ENST00000263073 LMTK3Q96Q04 1460 aa12.83□□□□□ -0.35
SMG6-201ENST00000263073 NOA1Q8NC60 698 aaKnown RBP12.83□□□□□ -0.36
SMG6-201ENST00000263073 SEC16BQ96JE7 1060 aa12.83□□□□□ -0.36
SMG6-201ENST00000263073 KLF6Q99612 283 aaPredicted RBP12.83□□□□□ -0.36
SMG6-201ENST00000263073 CELF4Q9BZC1 486 aaKnown RBP12.83□□□□□ -0.36
SMG6-201ENST00000263073 TRIM15Q9C019 465 aa12.83□□□□□ -0.36
SMG6-201ENST00000263073 ZC4H2Q9NQZ6 224 aa12.83□□□□□ -0.36
SMG6-201ENST00000263073 SRP68Q9UHB9 627 aaKnown RBP12.83□□□□□ -0.36
SMG6-201ENST00000263073 SFMBT1Q9UHJ3 866 aa12.83□□□□□ -0.36
SMG6-201ENST00000263073 TTC37Q6PGP7 1564 aa12.83□□□□□ -0.36
SMG6-201ENST00000263073 K7ERI5 159 aa12.83□□□□□ -0.36
SMG6-201ENST00000263073 ATP5HO75947 161 aa12.83□□□□□ -0.36
SMG6-201ENST00000263073 HSPA8P11142 646 aaKnown RBP12.83□□□□□ -0.36
SMG6-201ENST00000263073 PRDX5P30044 214 aa12.83□□□□□ -0.36
SMG6-201ENST00000263073 HSPA9P38646 679 aaKnown RBP12.83□□□□□ -0.36
SMG6-201ENST00000263073 PRAMEP78395 509 aa12.83□□□□□ -0.36
SMG6-201ENST00000263073 FLOT2Q14254 428 aa12.83□□□□□ -0.36
SMG6-201ENST00000263073 SUSD4Q5VX71 490 aa12.83□□□□□ -0.36
SMG6-201ENST00000263073 RAD9BQ6WBX8 426 aa12.83□□□□□ -0.36
SMG6-201ENST00000263073 RPF1Q9H9Y2 349 aaKnown RBP12.83□□□□□ -0.36
SMG6-201ENST00000263073 MAN1A2O60476 641 aa12.83□□□□□ -0.36
SMG6-201ENST00000263073 RAD17O75943 681 aa12.83□□□□□ -0.36
SMG6-201ENST00000263073 SYF2O95926 243 aaKnown RBP12.83□□□□□ -0.36
SMG6-201ENST00000263073 CPA2P48052 419 aa12.83□□□□□ -0.36
SMG6-201ENST00000263073 ARSEP51690 589 aa12.83□□□□□ -0.36
SMG6-201ENST00000263073 FSCBQ5H9T9 825 aa12.83□□□□□ -0.36
SMG6-201ENST00000263073 RHPN2Q8IUC4 686 aa12.83□□□□□ -0.36
SMG6-201ENST00000263073 MB21D2Q8IYB1 491 aaPredicted RBP12.83□□□□□ -0.36
SMG6-201ENST00000263073 RNPC3Q96LT9 517 aaKnown RBP12.83□□□□□ -0.36
SMG6-201ENST00000263073 STX18Q9P2W9 335 aaKnown RBP12.83□□□□□ -0.36
SMG6-201ENST00000263073 CPSF3Q9UKF6 684 aaKnown RBP12.83□□□□□ -0.36
SMG6-201ENST00000263073 GALNT4Q8N4A0 578 aa12.83□□□□□ -0.36
SMG6-201ENST00000263073 SYNMO15061 1565 aa12.83□□□□□ -0.36
SMG6-201ENST00000263073 HNRNPCL2B2RXH8 293 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 HNRNPCL1O60812 293 aaKnown RBP12.82□□□□□ -0.36
SMG6-201ENST00000263073 HLA-DPA1P20036 260 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 SNRNP27Q8WVK2 155 aaKnown RBP12.82□□□□□ -0.36
SMG6-201ENST00000263073 SAMD9LQ8IVG5 1584 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 PREX2Q70Z35 1606 aa12.82□□□□□ -0.36
SMG6-201ENST00000263073 ATP10DQ9P241 1426 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms