RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 VTI1AQ96AJ9 217 aa17.36■□□□□ 0.37
SREBF1-201ENST00000261646 GOLGA8IPA6NC78 632 aa17.35■□□□□ 0.37
SREBF1-201ENST00000261646 GOLGA8JA6NMD2 632 aa17.35■□□□□ 0.37
SREBF1-201ENST00000261646 TTLL1O95922 423 aa17.35■□□□□ 0.37
SREBF1-201ENST00000261646 FOSP01100 380 aaPredicted RBP17.35■□□□□ 0.37
SREBF1-201ENST00000261646 TEKT4Q8WW24 435 aa17.35■□□□□ 0.37
SREBF1-201ENST00000261646 ANO3Q9BYT9 981 aa17.35■□□□□ 0.37
SREBF1-201ENST00000261646 ALG13Q9NP73 1137 aaKnown RBP17.35■□□□□ 0.37
SREBF1-201ENST00000261646 BASP1P80723 227 aaKnown RBP17.35■□□□□ 0.37
SREBF1-201ENST00000261646 PKN1Q16512 942 aa17.35■□□□□ 0.37
SREBF1-201ENST00000261646 CENPUQ71F23 418 aa17.35■□□□□ 0.37
SREBF1-201ENST00000261646 ZNF564Q8TBZ8 553 aaPredicted RBP17.35■□□□□ 0.37
SREBF1-201ENST00000261646 CNKSR2Q8WXI2 1034 aa17.35■□□□□ 0.37
SREBF1-201ENST00000261646 POMGNT1Q8WZA1 660 aa17.35■□□□□ 0.37
SREBF1-201ENST00000261646 IFT122Q9HBG6 1241 aa17.35■□□□□ 0.37
SREBF1-201ENST00000261646 PNMA6FA0A0J9YX94 578 aa17.35■□□□□ 0.37
SREBF1-201ENST00000261646 FAM196BA6NMK8 535 aa17.35■□□□□ 0.37
SREBF1-201ENST00000261646 GOLGA8SH3BPF8 625 aa17.35■□□□□ 0.37
SREBF1-201ENST00000261646 GOLGA8MH3BSY2 632 aa17.35■□□□□ 0.37
SREBF1-201ENST00000261646 TRAPPC3O43617 180 aa17.35■□□□□ 0.37
SREBF1-201ENST00000261646 KLRK1P26718 216 aa17.35■□□□□ 0.37
SREBF1-201ENST00000261646 RFC1P35251 1148 aaPredicted RBP17.35■□□□□ 0.37
SREBF1-201ENST00000261646 CACNB3P54284 484 aa17.35■□□□□ 0.37
SREBF1-201ENST00000261646 MRPS35P82673 323 aaKnown RBP17.35■□□□□ 0.37
SREBF1-201ENST00000261646 YTHDF3Q7Z739 585 aaKnown RBP17.35■□□□□ 0.37
SREBF1-201ENST00000261646 AGGF1Q8N302 714 aaeCLIP17.35■□□□□ 0.37
SREBF1-201ENST00000261646 TPCN2Q8NHX9 752 aa17.35■□□□□ 0.37
SREBF1-201ENST00000261646 DUSP9Q99956 384 aaKnown RBP17.35■□□□□ 0.37
SREBF1-201ENST00000261646 GINM1Q9NU53 330 aa17.35■□□□□ 0.37
SREBF1-201ENST00000261646 OPLAHO14841 1288 aa17.34■□□□□ 0.37
SREBF1-201ENST00000261646 DYNC1I2Q13409 638 aaKnown RBP17.34■□□□□ 0.37
SREBF1-201ENST00000261646 XKR9Q5GH70 373 aa17.34■□□□□ 0.37
SREBF1-201ENST00000261646 CLEC10AQ8IUN9 316 aa17.34■□□□□ 0.37
SREBF1-201ENST00000261646 NUP85Q9BW27 656 aa17.34■□□□□ 0.37
SREBF1-201ENST00000261646 CDH16O75309 829 aa17.34■□□□□ 0.37
SREBF1-201ENST00000261646 ARFIP2P53365 341 aa17.34■□□□□ 0.37
SREBF1-201ENST00000261646 SPDYE1Q8NFV5 336 aaPredicted RBP17.34■□□□□ 0.37
SREBF1-201ENST00000261646 TBC1D22AQ8WUA7 517 aa17.34■□□□□ 0.37
SREBF1-201ENST00000261646 CEP95Q96GE4 821 aa17.34■□□□□ 0.37
SREBF1-201ENST00000261646 ZNF512BQ96KM6 892 aaPredicted RBP17.34■□□□□ 0.37
SREBF1-201ENST00000261646 NVLO15381 856 aaKnown RBP17.34■□□□□ 0.37
SREBF1-201ENST00000261646 CUL3Q13618 768 aa17.34■□□□□ 0.37
SREBF1-201ENST00000261646 MEI1Q5TIA1 1274 aa17.34■□□□□ 0.37
SREBF1-201ENST00000261646 C1orf146Q5VVC0 180 aa17.34■□□□□ 0.37
SREBF1-201ENST00000261646 FRMD5Q7Z6J6 570 aa17.34■□□□□ 0.37
SREBF1-201ENST00000261646 TTC16Q8NEE8 873 aa17.34■□□□□ 0.37
SREBF1-201ENST00000261646 CHORDC1Q9UHD1 332 aaPredicted RBP17.34■□□□□ 0.37
SREBF1-201ENST00000261646 IFT172Q9UG01 1749 aa17.34■□□□□ 0.37
SREBF1-201ENST00000261646 PHF2O75151 1096 aa17.33■□□□□ 0.37
SREBF1-201ENST00000261646 KRT1P04264 644 aa17.33■□□□□ 0.37
SREBF1-201ENST00000261646 TPD52P55327 224 aaPredicted RBP17.33■□□□□ 0.37
SREBF1-201ENST00000261646 AOC3Q16853 763 aa17.33■□□□□ 0.37
SREBF1-201ENST00000261646 CEP70Q8NHQ1 597 aa17.33■□□□□ 0.37
SREBF1-201ENST00000261646 PLA2G12BQ9BX93 195 aa17.33■□□□□ 0.37
SREBF1-201ENST00000261646 SUCLA2Q9P2R7 463 aaPredicted RBP17.33■□□□□ 0.37
SREBF1-201ENST00000261646 ALG6Q9Y672 507 aa17.33■□□□□ 0.37
SREBF1-201ENST00000261646 ITIH4Q14624 930 aa17.33■□□□□ 0.36
SREBF1-201ENST00000261646 CENPPQ6IPU0 288 aa17.33■□□□□ 0.36
SREBF1-201ENST00000261646 C4orf33Q8N1A6 199 aa17.33■□□□□ 0.36
SREBF1-201ENST00000261646 C15orf41Q9Y2V0 281 aa17.33■□□□□ 0.36
SREBF1-201ENST00000261646 PBX1P40424 430 aa17.33■□□□□ 0.36
SREBF1-201ENST00000261646 NR1H3Q13133 447 aa17.33■□□□□ 0.36
SREBF1-201ENST00000261646 DNAJC3Q13217 504 aa17.33■□□□□ 0.36
SREBF1-201ENST00000261646 SYN2Q92777 582 aaPredicted RBP17.33■□□□□ 0.36
SREBF1-201ENST00000261646 RNF25Q96BH1 459 aaPredicted RBP17.33■□□□□ 0.36
SREBF1-201ENST00000261646 SMYD3Q9H7B4 428 aa17.33■□□□□ 0.36
SREBF1-201ENST00000261646 BCAP29Q9UHQ4 241 aa17.33■□□□□ 0.36
SREBF1-201ENST00000261646 PITPNM2Q9BZ72 1349 aa17.33■□□□□ 0.36
SREBF1-201ENST00000261646 F8VZ95 297 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 GSTA1P08263 222 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 KCNA3P22001 575 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 KCTD19Q17RG1 926 aaPredicted RBP17.32■□□□□ 0.36
SREBF1-201ENST00000261646 CCDC14Q49A88 953 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 NAF1Q96HR8 494 aaKnown RBP17.32■□□□□ 0.36
SREBF1-201ENST00000261646 DHX36Q9H2U1 1008 aaKnown RBP17.32■□□□□ 0.36
SREBF1-201ENST00000261646 GDF3Q9NR23 364 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 ZWINTO95229 277 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 TARSP26639 723 aaKnown RBP17.32■□□□□ 0.36
SREBF1-201ENST00000261646 HADHQ16836 314 aaKnown RBP17.32■□□□□ 0.36
SREBF1-201ENST00000261646 GJB7Q6PEY0 223 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 PDIK1LQ8N165 341 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 SNF8Q96H20 258 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 SERPINB13Q9UIV8 391 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 HOXA13P31271 388 aaPredicted RBP17.32■□□□□ 0.36
SREBF1-201ENST00000261646 SERPINB4P48594 390 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 EPHB1P54762 984 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 BPIFB4P59827 614 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 TMPRSS15P98073 1019 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 PDIA5Q14554 519 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 TRMT10CQ7L0Y3 403 aaKnown RBP17.32■□□□□ 0.36
SREBF1-201ENST00000261646 ZNF34Q8IZ26 560 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 NACC1Q96RE7 527 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 INTS2Q9H0H0 1204 aaKnown RBP17.32■□□□□ 0.36
SREBF1-201ENST00000261646 TRABDQ9H4I3 376 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 ZFATQ9P243 1243 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 CLDN3O15551 220 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 ELF3P78545 371 aaPredicted RBP17.32■□□□□ 0.36
SREBF1-201ENST00000261646 CAV1Q03135 178 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 ICA1Q05084 483 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 IZUMO3Q5VZ72 239 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms