RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 CSDE1O75534 798 aaKnown RBP17.41■□□□□ 0.38
CCDC90B-201ENST00000260054 CHRNA1P02708 482 aa17.41■□□□□ 0.38
CCDC90B-201ENST00000260054 CKBP12277 381 aa17.41■□□□□ 0.38
CCDC90B-201ENST00000260054 CD44P16070 742 aaKnown RBP17.41■□□□□ 0.38
CCDC90B-201ENST00000260054 PRCPP42785 496 aa17.41■□□□□ 0.38
CCDC90B-201ENST00000260054 GTF2BQ00403 316 aa17.41■□□□□ 0.38
CCDC90B-201ENST00000260054 CDC42EP1Q00587 391 aa17.41■□□□□ 0.38
CCDC90B-201ENST00000260054 TYRO3Q06418 890 aa17.41■□□□□ 0.38
CCDC90B-201ENST00000260054 RBL2Q08999 1139 aa17.41■□□□□ 0.38
CCDC90B-201ENST00000260054 KCNA1Q09470 495 aa17.41■□□□□ 0.38
CCDC90B-201ENST00000260054 ZNF618Q5T7W0 954 aa17.41■□□□□ 0.38
CCDC90B-201ENST00000260054 TAS1R3Q7RTX0 852 aa17.41■□□□□ 0.38
CCDC90B-201ENST00000260054 IFNLR1Q8IU57 520 aaPredicted RBP17.41■□□□□ 0.38
CCDC90B-201ENST00000260054 TMEM40Q8WWA1 233 aa17.41■□□□□ 0.38
CCDC90B-201ENST00000260054 NFKBIZQ9BYH8 718 aa17.41■□□□□ 0.38
CCDC90B-201ENST00000260054 CELF4Q9BZC1 486 aaKnown RBP17.41■□□□□ 0.38
CCDC90B-201ENST00000260054 MINDY3Q9H8M7 445 aa17.41■□□□□ 0.38
CCDC90B-201ENST00000260054 TRPV2Q9Y5S1 764 aa17.41■□□□□ 0.38
CCDC90B-201ENST00000260054 CAND2O75155 1236 aa17.4■□□□□ 0.38
CCDC90B-201ENST00000260054 PRPF6O94906 941 aaKnown RBP17.4■□□□□ 0.38
CCDC90B-201ENST00000260054 IQCF3P0C7M6 154 aa17.4■□□□□ 0.38
CCDC90B-201ENST00000260054 PHKA2P46019 1235 aa17.4■□□□□ 0.38
CCDC90B-201ENST00000260054 TRAF7Q6Q0C0 670 aa17.4■□□□□ 0.38
CCDC90B-201ENST00000260054 ZNF710Q8N1W2 664 aa17.4■□□□□ 0.38
CCDC90B-201ENST00000260054 SLC17A8Q8NDX2 589 aa17.4■□□□□ 0.38
CCDC90B-201ENST00000260054 CAGE1Q8TC20 777 aa17.4■□□□□ 0.38
CCDC90B-201ENST00000260054 KCNN1Q92952 543 aa17.4■□□□□ 0.38
CCDC90B-201ENST00000260054 CCDC113Q9H0I3 377 aa17.4■□□□□ 0.38
CCDC90B-201ENST00000260054 C2orf40Q9H1Z8 148 aa17.4■□□□□ 0.38
CCDC90B-201ENST00000260054 PPP1R3GB7ZBB8 358 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 M0QZ92 97 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 HOXD13P35453 343 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 CRYBB1P53674 252 aaPredicted RBP17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 MBTD1Q05BQ5 628 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 STX1AQ16623 288 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 COBLL1Q53SF7 1204 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 FAM26DQ5JW98 314 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 ZBTB8OSQ8IWT0 167 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 ADSSL1Q8N142 457 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 ZNF507Q8TCN5 953 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 GCOM2Q9BZD3 368 aaPredicted RBP17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 GTPBP4Q9BZE4 634 aaKnown RBP17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 PCDHB13Q9Y5F0 798 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 PHLPP2Q6ZVD8 1323 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 H0YCG3 227 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 INO80B-WBP1J3KQ70 363 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 K7ERI5 159 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 EIF3DO15371 548 aaKnown RBP eCLIP17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 EDN1P05305 212 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 CCDC192P0DO97 292 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 DARSP14868 501 aaKnown RBP17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 EFNA5P52803 228 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 BFSP2Q13515 415 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 ALCAMQ13740 583 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 BMT2Q1RMZ1 405 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 L1TD1Q5T7N2 865 aaKnown RBP17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 SRGAP1Q7Z6B7 1085 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 NELFCDQ8IXH7 590 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 MYOCDQ8IZQ8 938 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 GUF1Q8N442 669 aaKnown RBP17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 MLKLQ8NB16 471 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 NOC4LQ9BVI4 516 aaKnown RBP17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 OSBPL7Q9BZF2 842 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 INO80BQ9C086 356 aaPredicted RBP17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 IKZF4Q9H2S9 585 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 TMEM134Q9H6X4 195 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 ANO10Q9NW15 660 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 TBX21Q9UL17 535 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 TBX20Q9UMR3 447 aa17.39■□□□□ 0.37
CCDC90B-201ENST00000260054 UMODL1Q5DID0 1318 aa17.38■□□□□ 0.37
CCDC90B-201ENST00000260054 CLTBP09497 229 aa17.38■□□□□ 0.37
CCDC90B-201ENST00000260054 EIF4BP23588 611 aaKnown RBP17.38■□□□□ 0.37
CCDC90B-201ENST00000260054 C11orf57Q6ZUT1 292 aaPredicted RBP17.38■□□□□ 0.37
CCDC90B-201ENST00000260054 STXBP4Q6ZWJ1 553 aa17.38■□□□□ 0.37
CCDC90B-201ENST00000260054 MAP4K3Q8IVH8 894 aa17.38■□□□□ 0.37
CCDC90B-201ENST00000260054 CCDC155Q8N6L0 562 aa17.38■□□□□ 0.37
CCDC90B-201ENST00000260054 FZD8Q9H461 694 aa17.38■□□□□ 0.37
CCDC90B-201ENST00000260054 USP20Q9Y2K6 914 aa17.38■□□□□ 0.37
CCDC90B-201ENST00000260054 SIP14410 1827 aa17.37■□□□□ 0.37
CCDC90B-201ENST00000260054 ZMYM2Q9UBW7 1377 aa17.37■□□□□ 0.37
CCDC90B-201ENST00000260054 TTLL13PA6NNM8 815 aa17.37■□□□□ 0.37
CCDC90B-201ENST00000260054 PITPNM1O00562 1244 aa17.37■□□□□ 0.37
CCDC90B-201ENST00000260054 PRKCBP05771 671 aa17.37■□□□□ 0.37
CCDC90B-201ENST00000260054 SCP2P22307 547 aa17.37■□□□□ 0.37
CCDC90B-201ENST00000260054 FGFR4P22455 802 aa17.37■□□□□ 0.37
CCDC90B-201ENST00000260054 ZNF445P59923 1031 aa17.37■□□□□ 0.37
CCDC90B-201ENST00000260054 MAPK6Q16659 721 aa17.37■□□□□ 0.37
CCDC90B-201ENST00000260054 KLHL10Q6JEL2 608 aa17.37■□□□□ 0.37
CCDC90B-201ENST00000260054 HVCN1Q96D96 273 aa17.37■□□□□ 0.37
CCDC90B-201ENST00000260054 DNAJC25Q9H1X3 360 aa17.37■□□□□ 0.37
CCDC90B-201ENST00000260054 HIPK3Q9H422 1215 aa17.37■□□□□ 0.37
CCDC90B-201ENST00000260054 UBE4BO95155 1302 aa17.37■□□□□ 0.37
CCDC90B-201ENST00000260054 B4GALT5O43286 388 aa17.36■□□□□ 0.37
CCDC90B-201ENST00000260054 SELPP16109 830 aa17.36■□□□□ 0.37
CCDC90B-201ENST00000260054 ABCD1P33897 745 aa17.36■□□□□ 0.37
CCDC90B-201ENST00000260054 STRN3Q13033 797 aa17.36■□□□□ 0.37
CCDC90B-201ENST00000260054 MBTPS1Q14703 1052 aa17.36■□□□□ 0.37
CCDC90B-201ENST00000260054 AMHR2Q16671 573 aa17.36■□□□□ 0.37
CCDC90B-201ENST00000260054 KNOP1Q1ED39 458 aaKnown RBP17.36■□□□□ 0.37
CCDC90B-201ENST00000260054 LRSAM1Q6UWE0 723 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms