RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 NEPROQ6NW34 567 aa12.75□□□□□ -0.37
CCNA1-201ENST00000255465 UNC13DQ70J99 1090 aa12.75□□□□□ -0.37
CCNA1-201ENST00000255465 RAB11FIP4Q86YS3 637 aa12.75□□□□□ -0.37
CCNA1-201ENST00000255465 RASAL3Q86YV0 1011 aa12.75□□□□□ -0.37
CCNA1-201ENST00000255465 SCAIQ8N9R8 606 aa12.75□□□□□ -0.37
CCNA1-201ENST00000255465 SDR42E1Q8WUS8 393 aa12.75□□□□□ -0.37
CCNA1-201ENST00000255465 PBKQ96KB5 322 aa12.75□□□□□ -0.37
CCNA1-201ENST00000255465 WRNIP1Q96S55 665 aa12.75□□□□□ -0.37
CCNA1-201ENST00000255465 ECT2Q9H8V3 914 aa12.75□□□□□ -0.37
CCNA1-201ENST00000255465 TIMMDC1Q9NPL8 285 aa12.75□□□□□ -0.37
CCNA1-201ENST00000255465 SAP30BPQ9UHR5 308 aaKnown RBP12.75□□□□□ -0.37
CCNA1-201ENST00000255465 RBM8AQ9Y5S9 174 aaKnown RBP12.75□□□□□ -0.37
CCNA1-201ENST00000255465 DOCK1Q14185 1865 aa12.75□□□□□ -0.37
CCNA1-201ENST00000255465 PCNTO95613 3336 aa12.75□□□□□ -0.37
CCNA1-201ENST00000255465 PRKAB2O43741 272 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 AOC2O75106 756 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 ATP2C2O75185 946 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 SUPT3HO75486 399 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 TFRCP02786 760 aaKnown RBP12.74□□□□□ -0.37
CCNA1-201ENST00000255465 SLC10A3P09131 477 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 TUBA4AP68366 448 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 ZNF280CQ8ND82 737 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 SLC10A4Q96EP9 437 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 AGBL1Q96MI9 1066 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 ZNF317Q96PQ6 595 aaPredicted RBP12.74□□□□□ -0.37
CCNA1-201ENST00000255465 PURBQ96QR8 312 aaKnown RBP12.74□□□□□ -0.37
CCNA1-201ENST00000255465 SAMSN1Q9NSI8 373 aaKnown RBP12.74□□□□□ -0.37
CCNA1-201ENST00000255465 PI4KBQ9UBF8 816 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 ZNF112Q9UJU3 913 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 CARD8Q9Y2G2 431 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 TBC1D30Q9Y2I9 924 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 NFE2L3Q9Y4A8 694 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 EPN1Q9Y6I3 576 aaPredicted RBP12.74□□□□□ -0.37
CCNA1-201ENST00000255465 LSM1O15116 133 aaKnown RBP12.74□□□□□ -0.37
CCNA1-201ENST00000255465 TJP3O95049 919 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 ABL1P00519 1130 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 PDHA1P08559 390 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 TPBGLP0DKB5 382 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 CCNB1P14635 433 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 PFKFB1P16118 471 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 VARSP26640 1264 aaKnown RBP12.74□□□□□ -0.37
CCNA1-201ENST00000255465 TMOD1P28289 359 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 SYKP43405 635 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 SERPINB4P48594 390 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 RAD23BP54727 409 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 PDE4BQ07343 736 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 NOGQ13253 232 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 VGLL4Q14135 290 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 NT5DC1Q5TFE4 455 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 HAUS3Q68CZ6 603 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 FAAH2Q6GMR7 532 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 FAM186BQ8IYM0 893 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 AGGF1Q8N302 714 aaeCLIP12.74□□□□□ -0.37
CCNA1-201ENST00000255465 SPATA4Q8NEY3 305 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 GATA6Q92908 595 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 ZNF333Q96JL9 665 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 STRBPQ96SI9 672 aaKnown RBP12.74□□□□□ -0.37
CCNA1-201ENST00000255465 LRRC1Q9BTT6 524 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 OSBPL10Q9BXB5 764 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 IRF2BPLQ9H1B7 796 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 DCP1AQ9NPI6 582 aaPredicted RBP12.74□□□□□ -0.37
CCNA1-201ENST00000255465 STOML1Q9UBI4 398 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 DMGDHQ9UI17 866 aaKnown RBP12.74□□□□□ -0.37
CCNA1-201ENST00000255465 SNX12Q9UMY4 172 aa12.74□□□□□ -0.37
CCNA1-201ENST00000255465 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.74□□□□□ -0.37
CCNA1-201ENST00000255465 SMIM31A0A1B0GVY4 71 aa12.73□□□□□ -0.37
CCNA1-201ENST00000255465 FAM196BA6NMK8 535 aa12.73□□□□□ -0.37
CCNA1-201ENST00000255465 PHF20L1A8MW92 1017 aa12.73□□□□□ -0.37
CCNA1-201ENST00000255465 GPAA1O43292 621 aa12.73□□□□□ -0.37
CCNA1-201ENST00000255465 NDUFA10O95299 355 aa12.73□□□□□ -0.37
CCNA1-201ENST00000255465 KCNJ2P63252 427 aa12.73□□□□□ -0.37
CCNA1-201ENST00000255465 PTH1RQ03431 593 aa12.73□□□□□ -0.37
CCNA1-201ENST00000255465 CYLC2Q14093 348 aaPredicted RBP12.73□□□□□ -0.37
CCNA1-201ENST00000255465 PLS1Q14651 629 aa12.73□□□□□ -0.37
CCNA1-201ENST00000255465 IMMTQ16891 758 aaKnown RBP12.73□□□□□ -0.37
CCNA1-201ENST00000255465 C8orf74Q6P047 294 aa12.73□□□□□ -0.37
CCNA1-201ENST00000255465 CROCCP2Q86T23 111 aa12.73□□□□□ -0.37
CCNA1-201ENST00000255465 PASD1Q8IV76 773 aa12.73□□□□□ -0.37
CCNA1-201ENST00000255465 GDAP1Q8TB36 358 aa12.73□□□□□ -0.37
CCNA1-201ENST00000255465 TMEM237Q96Q45 408 aa12.73□□□□□ -0.37
CCNA1-201ENST00000255465 ZIC5Q96T25 663 aa12.73□□□□□ -0.37
CCNA1-201ENST00000255465 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.73□□□□□ -0.37
CCNA1-201ENST00000255465 ABHD10Q9NUJ1 306 aa12.73□□□□□ -0.37
CCNA1-201ENST00000255465 PTTG2Q9NZH5 202 aa12.73□□□□□ -0.37
CCNA1-201ENST00000255465 SPO11Q9Y5K1 396 aa12.73□□□□□ -0.37
CCNA1-201ENST00000255465 CSADQ9Y600 493 aa12.73□□□□□ -0.37
CCNA1-201ENST00000255465 SLC4A4Q9Y6R1 1079 aa12.73□□□□□ -0.37
CCNA1-201ENST00000255465 PHIPQ8WWQ0 1821 aa12.73□□□□□ -0.37
CCNA1-201ENST00000255465 NVLO15381 856 aaKnown RBP12.72□□□□□ -0.37
CCNA1-201ENST00000255465 HNRNPRO43390 633 aaKnown RBP12.72□□□□□ -0.37
CCNA1-201ENST00000255465 PPP6R2O75170 966 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 HLA-DOAP06340 250 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 MSL3P1P0C860 447 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 VHLP40337 213 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 PAFAH1B1P43034 410 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 C2orf54Q08AI8 447 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 SYDE2Q5VT97 1194 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 METTL16Q86W50 562 aaKnown RBP12.72□□□□□ -0.37
CCNA1-201ENST00000255465 CREG2Q8IUH2 290 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 FOXP4Q8IVH2 680 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms