RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 SH3D19Q5HYK7 790 aa27.37■■□□□ 1.97
TMEM55B-201ENST00000250489 U2AF1L4Q8WU68 220 aaKnown RBP27.37■■□□□ 1.97
TMEM55B-201ENST00000250489 HVCN1Q96D96 273 aa27.37■■□□□ 1.97
TMEM55B-201ENST00000250489 MS4A14Q96JA4 679 aa27.37■■□□□ 1.97
TMEM55B-201ENST00000250489 CDHR1Q96JP9 859 aa27.37■■□□□ 1.97
TMEM55B-201ENST00000250489 ZMYND10O75800 440 aa27.37■■□□□ 1.97
TMEM55B-201ENST00000250489 NPTX2P47972 431 aa27.37■■□□□ 1.97
TMEM55B-201ENST00000250489 SMTNP53814 917 aa27.37■■□□□ 1.97
TMEM55B-201ENST00000250489 PLEKHO2Q8TD55 490 aa27.37■■□□□ 1.97
TMEM55B-201ENST00000250489 LRRC1Q9BTT6 524 aa27.37■■□□□ 1.97
TMEM55B-201ENST00000250489 JPH1Q9HDC5 661 aaPredicted RBP27.37■■□□□ 1.97
TMEM55B-201ENST00000250489 TBX20Q9UMR3 447 aa27.37■■□□□ 1.97
TMEM55B-201ENST00000250489 EXOC7Q9UPT5 735 aa27.37■■□□□ 1.97
TMEM55B-201ENST00000250489 CCDC169A6NNP5 214 aa27.36■■□□□ 1.97
TMEM55B-201ENST00000250489 DKC1O60832 514 aaKnown RBP eCLIP27.36■■□□□ 1.97
TMEM55B-201ENST00000250489 STAM2O75886 525 aa27.36■■□□□ 1.97
TMEM55B-201ENST00000250489 PSAPP07602 524 aa27.36■■□□□ 1.97
TMEM55B-201ENST00000250489 LMNB1P20700 586 aa27.36■■□□□ 1.97
TMEM55B-201ENST00000250489 DMP1Q13316 513 aaPredicted RBP27.36■■□□□ 1.97
TMEM55B-201ENST00000250489 PRKG1Q13976 671 aa27.36■■□□□ 1.97
TMEM55B-201ENST00000250489 EPC2Q52LR7 807 aa27.36■■□□□ 1.97
TMEM55B-201ENST00000250489 MAP4K3Q8IVH8 894 aa27.36■■□□□ 1.97
TMEM55B-201ENST00000250489 LRRC57Q8N9N7 239 aa27.36■■□□□ 1.97
TMEM55B-201ENST00000250489 RUBCNQ92622 972 aa27.36■■□□□ 1.97
TMEM55B-201ENST00000250489 CEP170P1Q96L14 293 aa27.36■■□□□ 1.97
TMEM55B-201ENST00000250489 PACSIN2Q9UNF0 486 aaPredicted RBP27.36■■□□□ 1.97
TMEM55B-201ENST00000250489 TELO2Q9Y4R8 837 aa27.36■■□□□ 1.97
TMEM55B-201ENST00000250489 ARID2Q68CP9 1835 aa27.36■■□□□ 1.97
TMEM55B-201ENST00000250489 A0A0A6YYK5 440 aaPredicted RBP27.35■■□□□ 1.97
TMEM55B-201ENST00000250489 USP2O75604 605 aaPredicted RBP27.35■■□□□ 1.97
TMEM55B-201ENST00000250489 CCDC172P0C7W6 258 aa27.35■■□□□ 1.97
TMEM55B-201ENST00000250489 MATR3P43243 847 aaKnown RBP eCLIP27.35■■□□□ 1.97
TMEM55B-201ENST00000250489 NOP2P46087 812 aaKnown RBP27.35■■□□□ 1.97
TMEM55B-201ENST00000250489 CCNI2Q6ZMN8 369 aaPredicted RBP27.35■■□□□ 1.97
TMEM55B-201ENST00000250489 BSNDQ8WZ55 320 aa27.35■■□□□ 1.97
TMEM55B-201ENST00000250489 KIFAP3Q92845 792 aa27.35■■□□□ 1.97
TMEM55B-201ENST00000250489 KIFC3Q9BVG8 833 aa27.35■■□□□ 1.97
TMEM55B-201ENST00000250489 SLC9A2Q9UBY0 812 aa27.35■■□□□ 1.97
TMEM55B-201ENST00000250489 LCTP09848 1927 aa27.35■■□□□ 1.97
TMEM55B-201ENST00000250489 SPATA31C2B4DYI2 1134 aa27.35■■□□□ 1.97
TMEM55B-201ENST00000250489 H3BQF6 201 aa27.35■■□□□ 1.97
TMEM55B-201ENST00000250489 POLR3GO15318 223 aaPredicted RBP27.35■■□□□ 1.97
TMEM55B-201ENST00000250489 EIF3JO75822 258 aaKnown RBP27.35■■□□□ 1.97
TMEM55B-201ENST00000250489 GCLMP48507 274 aa27.35■■□□□ 1.97
TMEM55B-201ENST00000250489 MCCD1P59942 119 aaPredicted RBP27.35■■□□□ 1.97
TMEM55B-201ENST00000250489 CETN1Q12798 172 aa27.35■■□□□ 1.97
TMEM55B-201ENST00000250489 ARHGAP44Q17R89 818 aa27.35■■□□□ 1.97
TMEM55B-201ENST00000250489 SWSAP1Q6NVH7 229 aa27.35■■□□□ 1.97
TMEM55B-201ENST00000250489 GLYCTKQ8IVS8 523 aa27.35■■□□□ 1.97
TMEM55B-201ENST00000250489 SPIRE2Q8WWL2 714 aa27.35■■□□□ 1.97
TMEM55B-201ENST00000250489 PDE11AQ9HCR9 933 aa27.35■■□□□ 1.97
TMEM55B-201ENST00000250489 RBM12Q9NTZ6 932 aaKnown RBP27.35■■□□□ 1.97
TMEM55B-201ENST00000250489 LRRIQ3A6PVS8 624 aaPredicted RBP27.34■■□□□ 1.97
TMEM55B-201ENST00000250489 ANKRD63C9JTQ0 380 aa27.34■■□□□ 1.97
TMEM55B-201ENST00000250489 ADRB2P07550 413 aa27.34■■□□□ 1.97
TMEM55B-201ENST00000250489 DNA2P51530 1060 aa27.34■■□□□ 1.97
TMEM55B-201ENST00000250489 TPCN2Q8NHX9 752 aa27.34■■□□□ 1.97
TMEM55B-201ENST00000250489 C17orf75Q9HAS0 396 aa27.34■■□□□ 1.97
TMEM55B-201ENST00000250489 KMT5AQ9NQR1 393 aa27.34■■□□□ 1.97
TMEM55B-201ENST00000250489 SNCAIPQ9Y6H5 919 aa27.34■■□□□ 1.97
TMEM55B-201ENST00000250489 DOCK5Q9H7D0 1870 aa27.34■■□□□ 1.97
TMEM55B-201ENST00000250489 DICER1Q9UPY3 1922 aaKnown RBP27.34■■□□□ 1.97
TMEM55B-201ENST00000250489 ADSSP30520 456 aa27.33■■□□□ 1.97
TMEM55B-201ENST00000250489 ACTR2P61160 394 aa27.33■■□□□ 1.97
TMEM55B-201ENST00000250489 KIF22Q14807 665 aa27.33■■□□□ 1.97
TMEM55B-201ENST00000250489 GNPTABQ3T906 1256 aa27.33■■□□□ 1.97
TMEM55B-201ENST00000250489 CCDC60Q8IWA6 550 aaPredicted RBP27.33■■□□□ 1.97
TMEM55B-201ENST00000250489 HDAC7Q8WUI4 952 aa27.33■■□□□ 1.97
TMEM55B-201ENST00000250489 NTPCRQ9BSD7 190 aaKnown RBP27.33■■□□□ 1.97
TMEM55B-201ENST00000250489 DENND3A2RUS2 1198 aa27.33■■□□□ 1.97
TMEM55B-201ENST00000250489 PMM2O15305 246 aa27.33■■□□□ 1.97
TMEM55B-201ENST00000250489 MYBL2P10244 700 aa27.33■■□□□ 1.97
TMEM55B-201ENST00000250489 GALCP54803 685 aa27.33■■□□□ 1.97
TMEM55B-201ENST00000250489 FAM193AP78312 1265 aa27.33■■□□□ 1.97
TMEM55B-201ENST00000250489 GPS2Q13227 327 aa27.33■■□□□ 1.97
TMEM55B-201ENST00000250489 ABHD15Q6UXT9 468 aa27.33■■□□□ 1.97
TMEM55B-201ENST00000250489 ARHGEF19Q8IW93 802 aa27.33■■□□□ 1.97
TMEM55B-201ENST00000250489 PDLIM7Q9NR12 457 aa27.33■■□□□ 1.97
TMEM55B-201ENST00000250489 DMGDHQ9UI17 866 aaKnown RBP27.33■■□□□ 1.97
TMEM55B-201ENST00000250489 PFASO15067 1338 aa27.32■■□□□ 1.96
TMEM55B-201ENST00000250489 GOLGA8IPA6NC78 632 aa27.32■■□□□ 1.96
TMEM55B-201ENST00000250489 GOLGA8JA6NMD2 632 aa27.32■■□□□ 1.96
TMEM55B-201ENST00000250489 FOXN3O00409 490 aaPredicted RBP27.32■■□□□ 1.96
TMEM55B-201ENST00000250489 CES2O00748 559 aa27.32■■□□□ 1.96
TMEM55B-201ENST00000250489 SOX10P56693 466 aa27.32■■□□□ 1.96
TMEM55B-201ENST00000250489 SP4Q02446 784 aa27.32■■□□□ 1.96
TMEM55B-201ENST00000250489 RPS6KA1Q15418 735 aa27.32■■□□□ 1.96
TMEM55B-201ENST00000250489 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.32■■□□□ 1.96
TMEM55B-201ENST00000250489 VTI1AQ96AJ9 217 aa27.32■■□□□ 1.96
TMEM55B-201ENST00000250489 ZCCHC17Q9NP64 241 aaKnown RBP27.32■■□□□ 1.96
TMEM55B-201ENST00000250489 UBE2TQ9NPD8 197 aaPredicted RBP27.32■■□□□ 1.96
TMEM55B-201ENST00000250489 KIF4AO95239 1232 aa27.31■■□□□ 1.96
TMEM55B-201ENST00000250489 VGLL4Q14135 290 aa27.31■■□□□ 1.96
TMEM55B-201ENST00000250489 CBWD2Q8IUF1 395 aa27.31■■□□□ 1.96
TMEM55B-201ENST00000250489 TAF4BQ92750 862 aa27.31■■□□□ 1.96
TMEM55B-201ENST00000250489 TMEM117Q9H0C3 514 aa27.31■■□□□ 1.96
TMEM55B-201ENST00000250489 VIPAS39Q9H9C1 493 aa27.31■■□□□ 1.96
TMEM55B-201ENST00000250489 LRRN2O75325 713 aa27.31■■□□□ 1.96
TMEM55B-201ENST00000250489 DGAT1O75907 488 aa27.31■■□□□ 1.96
TMEM55B-201ENST00000250489 CNGA1P29973 690 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms